RNA–Protein interactions for RNA: ENST00000636616.1

EFHC1-223, Transcript of EF-hand domain containing 1, human

TSL 5

Gene EFHC1, Length 1,636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFHC1-223	ENST00000636616	AEBP2	Q6ZN18	517 aa	Predicted RBP	20.58	■□□□□ 0.89
EFHC1-223	ENST00000636616	CHIC1	Q5VXU3	224 aa		19.33	■□□□□ 0.68
EFHC1-223	ENST00000636616	POTED	Q86YR6	584 aa		18.11	■□□□□ 0.49
EFHC1-223	ENST00000636616	SENP3	Q9H4L4	574 aa	Predicted RBP	17.87	■□□□□ 0.45
EFHC1-223	ENST00000636616	PHF23	Q9BUL5	403 aa	Predicted RBP	17.36	■□□□□ 0.37
EFHC1-223	ENST00000636616	FOXD1	Q16676	465 aa		16.71	■□□□□ 0.27
EFHC1-223	ENST00000636616	MSH5	O43196	834 aa		16.32	■□□□□ 0.2
EFHC1-223	ENST00000636616	PLPPR3	Q6T4P5	718 aa		15.71	■□□□□ 0.11
EFHC1-223	ENST00000636616	PIAS4	Q8N2W9	510 aa	Predicted RBP	15.32	■□□□□ 0.04
EFHC1-223	ENST00000636616	PPP6R1	Q9UPN7	881 aa		14.92	□□□□□ -0.02
EFHC1-223	ENST00000636616	ADRA2B	P18089	450 aa		14.92	□□□□□ -0.02
EFHC1-223	ENST00000636616	CACNB1	Q02641	598 aa	Predicted RBP	14.79	□□□□□ -0.04
EFHC1-223	ENST00000636616	POTEH	Q6S545	545 aa		13.96	□□□□□ -0.17
EFHC1-223	ENST00000636616	DMRT2	Q9Y5R5	561 aa		13.93	□□□□□ -0.18
EFHC1-223	ENST00000636616	PPP4R3CP	Q6ZMV5	832 aa		13.86	□□□□□ -0.19
EFHC1-223	ENST00000636616	KCNA4	P22459	653 aa		13.72	□□□□□ -0.21
EFHC1-223	ENST00000636616	RNF39	Q9H2S5	420 aa		13.68	□□□□□ -0.22
EFHC1-223	ENST00000636616	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.68	□□□□□ -0.22
EFHC1-223	ENST00000636616	SCAF1	Q9H7N4	1312 aa	Known RBP	13.64	□□□□□ -0.23
EFHC1-223	ENST00000636616	NCBP3	Q53F19	620 aa	Known RBP	13.54	□□□□□ -0.24
EFHC1-223	ENST00000636616	C1QBP	Q07021	282 aa	Known RBP	13.5	□□□□□ -0.25
EFHC1-223	ENST00000636616	CNKSR2	Q8WXI2	1034 aa		13.45	□□□□□ -0.26
EFHC1-223	ENST00000636616	DCAF8L1	A6NGE4	600 aa		13.42	□□□□□ -0.26
EFHC1-223	ENST00000636616	NPM3	O75607	178 aa	Known RBP	13.35	□□□□□ -0.27
EFHC1-223	ENST00000636616	RNF216	Q9NWF9	866 aa	Predicted RBP	13.14	□□□□□ -0.31
EFHC1-223	ENST00000636616	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.09	□□□□□ -0.31
EFHC1-223	ENST00000636616	HOXD11	P31277	338 aa	Predicted RBP	13.06	□□□□□ -0.32
EFHC1-223	ENST00000636616	DNAJC5B	Q9UF47	199 aa		12.95	□□□□□ -0.34
EFHC1-223	ENST00000636616	EHMT2	Q96KQ7	1210 aa		12.89	□□□□□ -0.35
EFHC1-223	ENST00000636616	CSRNP3	Q8WYN3	585 aa		12.69	□□□□□ -0.38
EFHC1-223	ENST00000636616	ZBTB22	O15209	634 aa		12.63	□□□□□ -0.39
EFHC1-223	ENST00000636616	SLC4A2	P04920	1241 aa		12.58	□□□□□ -0.4
EFHC1-223	ENST00000636616	FOXD4L1	Q9NU39	408 aa		12.58	□□□□□ -0.4
EFHC1-223	ENST00000636616	SP7	Q8TDD2	431 aa	Predicted RBP	12.46	□□□□□ -0.41
EFHC1-223	ENST00000636616	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.43	□□□□□ -0.42
EFHC1-223	ENST00000636616	DSG3	P32926	999 aa		12.36	□□□□□ -0.43
EFHC1-223	ENST00000636616	MYCN	P04198	464 aa	Predicted RBP	12.33	□□□□□ -0.44
EFHC1-223	ENST00000636616		U3KPZ7	1027 aa	Predicted RBP	12.26	□□□□□ -0.45
EFHC1-223	ENST00000636616	CAPN15	O75808	1086 aa		12.15	□□□□□ -0.47
EFHC1-223	ENST00000636616	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.14	□□□□□ -0.47
EFHC1-223	ENST00000636616	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.14	□□□□□ -0.47
EFHC1-223	ENST00000636616	CHRDL2	Q6WN34	429 aa		12.14	□□□□□ -0.47
EFHC1-223	ENST00000636616	ATXN8OS	P0DMR3	200 aa		12.13	□□□□□ -0.47
EFHC1-223	ENST00000636616	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.1	□□□□□ -0.47
EFHC1-223	ENST00000636616	PLSCR2	Q9NRY7	297 aa		12.09	□□□□□ -0.47
EFHC1-223	ENST00000636616	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.03	□□□□□ -0.48
EFHC1-223	ENST00000636616	ATF5	Q9Y2D1	282 aa	Predicted RBP	12	□□□□□ -0.49
EFHC1-223	ENST00000636616	RBM42	Q9BTD8	480 aa	Known RBP	11.98	□□□□□ -0.49
EFHC1-223	ENST00000636616	APLP2	Q06481	763 aa		11.97	□□□□□ -0.49
EFHC1-223	ENST00000636616	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.79	□□□□□ -0.52
EFHC1-223	ENST00000636616	TRH	P20396	242 aa	Predicted RBP	11.78	□□□□□ -0.52
EFHC1-223	ENST00000636616	HAX1	O00165	279 aa		11.74	□□□□□ -0.53
EFHC1-223	ENST00000636616	LHX8	Q68G74	356 aa		11.67	□□□□□ -0.54
EFHC1-223	ENST00000636616	ABCB7	O75027	752 aa		11.65	□□□□□ -0.54
EFHC1-223	ENST00000636616	POLA2	Q14181	598 aa		11.64	□□□□□ -0.55
EFHC1-223	ENST00000636616	PIP4P2	Q8N4L2	257 aa		11.51	□□□□□ -0.57
EFHC1-223	ENST00000636616	SLC24A1	O60721	1099 aa		11.5	□□□□□ -0.57
EFHC1-223	ENST00000636616	MKRN4P	Q13434	485 aa	Predicted RBP	11.48	□□□□□ -0.57
EFHC1-223	ENST00000636616	FBLN2	P98095	1184 aa		11.46	□□□□□ -0.57
EFHC1-223	ENST00000636616	FKBP8	Q14318	412 aa		11.46	□□□□□ -0.58
EFHC1-223	ENST00000636616	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.44	□□□□□ -0.58
EFHC1-223	ENST00000636616	EVX2	Q03828	476 aa		11.37	□□□□□ -0.59
EFHC1-223	ENST00000636616	AKT1S1	Q96B36	256 aa		11.35	□□□□□ -0.59
EFHC1-223	ENST00000636616	SPDYE4	A6NLX3	237 aa		11.29	□□□□□ -0.6
EFHC1-223	ENST00000636616	FXR2	P51116	673 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
EFHC1-223	ENST00000636616	OSCAR	Q8IYS5	282 aa		11.22	□□□□□ -0.61
EFHC1-223	ENST00000636616	REM2	Q8IYK8	340 aa	Predicted RBP	11.17	□□□□□ -0.62
EFHC1-223	ENST00000636616	SPDYE2B	A6NHP3	402 aa		11.16	□□□□□ -0.62
EFHC1-223	ENST00000636616	SPDYE6	P0CI01	402 aa		11.16	□□□□□ -0.62
EFHC1-223	ENST00000636616	SPDYE2	Q495Y8	402 aa		11.16	□□□□□ -0.62
EFHC1-223	ENST00000636616	ZNF692	Q9BU19	519 aa	Predicted RBP	11.14	□□□□□ -0.63
EFHC1-223	ENST00000636616	PROM2	Q8N271	834 aa		11.13	□□□□□ -0.63
EFHC1-223	ENST00000636616	GABBR2	O75899	941 aa		11.11	□□□□□ -0.63
EFHC1-223	ENST00000636616	PCDH10	Q9P2E7	1040 aa		11.1	□□□□□ -0.63
EFHC1-223	ENST00000636616	SSUH2	Q9Y2M2	353 aa		11.09	□□□□□ -0.63
EFHC1-223	ENST00000636616	RTN4	Q9NQC3	1192 aa	Known RBP	11.08	□□□□□ -0.64
EFHC1-223	ENST00000636616	POTEM	A6NI47	508 aa		11.06	□□□□□ -0.64
EFHC1-223	ENST00000636616	PITPNM1	O00562	1244 aa		11.05	□□□□□ -0.64
EFHC1-223	ENST00000636616	FBXO3	Q9UK99	471 aa		11	□□□□□ -0.65
EFHC1-223	ENST00000636616	PABPN1	Q86U42	306 aa	Known RBP eCLIP	10.99	□□□□□ -0.65
EFHC1-223	ENST00000636616	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.98	□□□□□ -0.65
EFHC1-223	ENST00000636616	POTEG	Q6S5H5	508 aa		10.96	□□□□□ -0.65
EFHC1-223	ENST00000636616	C19orf67	A6NJJ6	358 aa		10.95	□□□□□ -0.66
EFHC1-223	ENST00000636616	VASP	P50552	380 aa	Predicted RBP	10.84	□□□□□ -0.67
EFHC1-223	ENST00000636616	STAG3	Q9UJ98	1225 aa		10.84	□□□□□ -0.67
EFHC1-223	ENST00000636616	POTEI	P0CG38	1075 aa		10.84	□□□□□ -0.67
EFHC1-223	ENST00000636616	SPDYE1	Q8NFV5	336 aa	Predicted RBP	10.79	□□□□□ -0.68
EFHC1-223	ENST00000636616	PRKAR2A	P13861	404 aa	Known RBP	10.78	□□□□□ -0.68
EFHC1-223	ENST00000636616	CLEC11A	Q9Y240	323 aa		10.73	□□□□□ -0.69
EFHC1-223	ENST00000636616	IFNLR1	Q8IU57	520 aa	Predicted RBP	10.72	□□□□□ -0.69
EFHC1-223	ENST00000636616	MIER1	Q8N108	512 aa		10.69	□□□□□ -0.7
EFHC1-223	ENST00000636616	PLCD3	Q8N3E9	789 aa		10.69	□□□□□ -0.7
EFHC1-223	ENST00000636616	CLCN6	P51797	869 aa		10.68	□□□□□ -0.7
EFHC1-223	ENST00000636616	OTUD5	Q96G74	571 aa		10.67	□□□□□ -0.7
EFHC1-223	ENST00000636616	PRR29	P0C7W0	189 aa		10.66	□□□□□ -0.7
EFHC1-223	ENST00000636616	KLHL34	Q8N239	644 aa		10.63	□□□□□ -0.71
EFHC1-223	ENST00000636616	PLEKHG5	O94827	1062 aa		10.61	□□□□□ -0.71
EFHC1-223	ENST00000636616	DCBLD2	Q96PD2	775 aa		10.61	□□□□□ -0.71
EFHC1-223	ENST00000636616	CREBZF	Q9NS37	354 aa		10.57	□□□□□ -0.72
EFHC1-223	ENST00000636616	SPOCK2	Q92563	424 aa		10.56	□□□□□ -0.72

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