RNA–Protein interactions for RNA: ENST00000635688.1

SMARCA2-245, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-245ENST00000635688 SMPD1P17405 629 aa13.81□□□□□ -0.2
SMARCA2-245ENST00000635688 CCDC24Q8N4L8 307 aa13.81□□□□□ -0.2
SMARCA2-245ENST00000635688 KIF13AQ9H1H9 1805 aa13.8□□□□□ -0.2
SMARCA2-245ENST00000635688 CEP170Q5SW79 1584 aa13.79□□□□□ -0.2
SMARCA2-245ENST00000635688 AXIN1O15169 862 aa13.79□□□□□ -0.2
SMARCA2-245ENST00000635688 SKOR1P84550 965 aa13.79□□□□□ -0.2
SMARCA2-245ENST00000635688 GMPR2Q9P2T1 348 aaKnown RBP13.79□□□□□ -0.2
SMARCA2-245ENST00000635688 GRIN2AQ12879 1464 aa13.79□□□□□ -0.2
SMARCA2-245ENST00000635688 ABCA10Q8WWZ4 1543 aa13.79□□□□□ -0.2
SMARCA2-245ENST00000635688 J3QL48 77 aa13.78□□□□□ -0.2
SMARCA2-245ENST00000635688 PCDHGC3Q9UN70 934 aa13.78□□□□□ -0.2
SMARCA2-245ENST00000635688 ABCA5Q8WWZ7 1642 aa13.78□□□□□ -0.2
SMARCA2-245ENST00000635688 NUP160Q12769 1436 aa13.77□□□□□ -0.21
SMARCA2-245ENST00000635688 SNIP1Q8TAD8 396 aaKnown RBP13.77□□□□□ -0.21
SMARCA2-245ENST00000635688 SMCPP49901 116 aaPredicted RBP13.76□□□□□ -0.21
SMARCA2-245ENST00000635688 JUNDP17535 347 aa13.75□□□□□ -0.21
SMARCA2-245ENST00000635688 CTC1Q2NKJ3 1217 aa13.75□□□□□ -0.21
SMARCA2-245ENST00000635688 NUTM1Q86Y26 1132 aa13.75□□□□□ -0.21
SMARCA2-245ENST00000635688 LCE2AQ5TA79 106 aaPredicted RBP13.74□□□□□ -0.21
SMARCA2-245ENST00000635688 SHROOM2Q13796 1616 aa13.73□□□□□ -0.21
SMARCA2-245ENST00000635688 SSTR3P32745 418 aaPredicted RBP13.73□□□□□ -0.21
SMARCA2-245ENST00000635688 FAM69CQ0P6D2 419 aa13.73□□□□□ -0.21
SMARCA2-245ENST00000635688 PTCRAQ6ISU1 281 aaPredicted RBP13.73□□□□□ -0.21
SMARCA2-245ENST00000635688 KRI1Q8N9T8 703 aaKnown RBP13.73□□□□□ -0.21
SMARCA2-245ENST00000635688 RC3H1Q5TC82 1133 aaKnown RBP13.72□□□□□ -0.21
SMARCA2-245ENST00000635688 FDX1P10109 184 aa13.71□□□□□ -0.21
SMARCA2-245ENST00000635688 BARGINQ6ZT62 677 aa13.71□□□□□ -0.21
SMARCA2-245ENST00000635688 RETREG3Q86VR2 466 aa13.71□□□□□ -0.21
SMARCA2-245ENST00000635688 SPIRE2Q8WWL2 714 aa13.71□□□□□ -0.21
SMARCA2-245ENST00000635688 ADAMTS12P58397 1594 aa13.71□□□□□ -0.22
SMARCA2-245ENST00000635688 ZMYND10O75800 440 aa13.7□□□□□ -0.22
SMARCA2-245ENST00000635688 NDUFV2P19404 249 aa13.7□□□□□ -0.22
SMARCA2-245ENST00000635688 HPS1Q92902 700 aa13.7□□□□□ -0.22
SMARCA2-245ENST00000635688 ABCC10Q5T3U5 1492 aa13.69□□□□□ -0.22
SMARCA2-245ENST00000635688 FHAD1B1AJZ9 1412 aa13.68□□□□□ -0.22
SMARCA2-245ENST00000635688 PRG4Q92954 1404 aaPredicted RBP13.68□□□□□ -0.22
SMARCA2-245ENST00000635688 C11orf95C9JLR9 678 aaPredicted RBP13.68□□□□□ -0.22
SMARCA2-245ENST00000635688 TREML4Q6UXN2 200 aa13.68□□□□□ -0.22
SMARCA2-245ENST00000635688 NUDT12Q9BQG2 462 aa13.68□□□□□ -0.22
SMARCA2-245ENST00000635688 C6orf229H3BNL8 230 aa13.67□□□□□ -0.22
SMARCA2-245ENST00000635688 WNT7BP56706 349 aa13.67□□□□□ -0.22
SMARCA2-245ENST00000635688 ZC3H15Q8WU90 426 aaKnown RBP13.67□□□□□ -0.22
SMARCA2-245ENST00000635688 MOXD2PA6NHM9 499 aa13.66□□□□□ -0.22
SMARCA2-245ENST00000635688 WRNQ14191 1432 aaPredicted RBP eCLIP13.65□□□□□ -0.22
SMARCA2-245ENST00000635688 TTLL12Q14166 644 aaPredicted RBP13.65□□□□□ -0.22
SMARCA2-245ENST00000635688 ATP13A2Q9NQ11 1180 aa13.65□□□□□ -0.22
SMARCA2-245ENST00000635688 AMHR2Q16671 573 aa13.64□□□□□ -0.23
SMARCA2-245ENST00000635688 GIGYF2Q6Y7W6 1299 aaKnown RBP13.63□□□□□ -0.23
SMARCA2-245ENST00000635688 SIAH2O43255 324 aa13.62□□□□□ -0.23
SMARCA2-245ENST00000635688 SNRPBP14678 240 aaKnown RBP13.62□□□□□ -0.23
SMARCA2-245ENST00000635688 MAPKBP1O60336 1514 aa13.62□□□□□ -0.23
SMARCA2-245ENST00000635688 DIP2BQ9P265 1576 aa13.62□□□□□ -0.23
SMARCA2-245ENST00000635688 KDM6BO15054 1643 aa13.61□□□□□ -0.23
SMARCA2-245ENST00000635688 ALDH1A1P00352 501 aa13.6□□□□□ -0.23
SMARCA2-245ENST00000635688 MS4A1P11836 297 aa13.6□□□□□ -0.23
SMARCA2-245ENST00000635688 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
SMARCA2-245ENST00000635688 SH3BP2P78314 561 aa13.59□□□□□ -0.23
SMARCA2-245ENST00000635688 TSPOAP1O95153 1857 aa13.59□□□□□ -0.23
SMARCA2-245ENST00000635688 CCNYL3P0C7X3 344 aa13.58□□□□□ -0.24
SMARCA2-245ENST00000635688 BEGAINQ9BUH8 593 aa13.58□□□□□ -0.24
SMARCA2-245ENST00000635688 NFX1Q12986 1120 aaKnown RBP13.57□□□□□ -0.24
SMARCA2-245ENST00000635688 PRR7Q8TB68 274 aa13.57□□□□□ -0.24
SMARCA2-245ENST00000635688 EHBP1Q8NDI1 1231 aa13.56□□□□□ -0.24
SMARCA2-245ENST00000635688 EVA1BQ9NVM1 165 aa13.56□□□□□ -0.24
SMARCA2-245ENST00000635688 ADCY10Q96PN6 1610 aa13.56□□□□□ -0.24
SMARCA2-245ENST00000635688 PTPRNQ16849 979 aa13.55□□□□□ -0.24
SMARCA2-245ENST00000635688 LCE2CQ5TA81 110 aa13.55□□□□□ -0.24
SMARCA2-245ENST00000635688 PARP9Q8IXQ6 854 aa13.55□□□□□ -0.24
SMARCA2-245ENST00000635688 UNC93B1Q9H1C4 597 aa13.55□□□□□ -0.24
SMARCA2-245ENST00000635688 WFS1O76024 890 aa13.54□□□□□ -0.24
SMARCA2-245ENST00000635688 TRIM47Q96LD4 638 aa13.54□□□□□ -0.24
SMARCA2-245ENST00000635688 TOP2BQ02880 1626 aa13.53□□□□□ -0.24
SMARCA2-245ENST00000635688 MTMR2Q13614 643 aa13.53□□□□□ -0.24
SMARCA2-245ENST00000635688 LINC01559Q495D7 138 aa13.53□□□□□ -0.24
SMARCA2-245ENST00000635688 TBC1D2Q9BYX2 928 aa13.53□□□□□ -0.24
SMARCA2-245ENST00000635688 PCDHB15Q9Y5E8 787 aa13.53□□□□□ -0.24
SMARCA2-245ENST00000635688 BIVM-ERCC5R4GMW8 1640 aa13.53□□□□□ -0.24
SMARCA2-245ENST00000635688 BAP1Q92560 729 aa13.52□□□□□ -0.25
SMARCA2-245ENST00000635688 RUSC2Q8N2Y8 1516 aa13.52□□□□□ -0.25
SMARCA2-245ENST00000635688 TRIM66O15016 1216 aa13.51□□□□□ -0.25
SMARCA2-245ENST00000635688 KCNH2Q12809 1159 aa13.51□□□□□ -0.25
SMARCA2-245ENST00000635688 RSBN1LQ6PCB5 846 aaPredicted RBP13.5□□□□□ -0.25
SMARCA2-245ENST00000635688 SENP2Q9HC62 589 aa13.49□□□□□ -0.25
SMARCA2-245ENST00000635688 TLL2Q9Y6L7 1015 aa13.49□□□□□ -0.25
SMARCA2-245ENST00000635688 BMP1P13497 986 aa13.48□□□□□ -0.25
SMARCA2-245ENST00000635688 DESI1Q6ICB0 168 aa13.48□□□□□ -0.25
SMARCA2-245ENST00000635688 ADGRL1O94910 1474 aa13.48□□□□□ -0.25
SMARCA2-245ENST00000635688 CFAP99D6REC4 459 aa13.47□□□□□ -0.25
SMARCA2-245ENST00000635688 TRIM46Q7Z4K8 759 aa13.47□□□□□ -0.25
SMARCA2-245ENST00000635688 ZNF511Q8NB15 262 aa13.46□□□□□ -0.25
SMARCA2-245ENST00000635688 WASF2Q9Y6W5 498 aa13.46□□□□□ -0.25
SMARCA2-245ENST00000635688 SPDYE5A6NIY4 337 aa13.45□□□□□ -0.26
SMARCA2-245ENST00000635688 KIAA0586Q9BVV6 1533 aa13.44□□□□□ -0.26
SMARCA2-245ENST00000635688 TERTO14746 1132 aaKnown RBP13.44□□□□□ -0.26
SMARCA2-245ENST00000635688 SPTLC1O15269 473 aa13.44□□□□□ -0.26
SMARCA2-245ENST00000635688 GJA5P36382 358 aa13.44□□□□□ -0.26
SMARCA2-245ENST00000635688 CAPN5O15484 640 aaPredicted RBP13.43□□□□□ -0.26
SMARCA2-245ENST00000635688 HRCP23327 699 aa13.43□□□□□ -0.26
SMARCA2-245ENST00000635688 LYPD8Q6UX82 237 aa13.43□□□□□ -0.26
SMARCA2-245ENST00000635688 CABLES1Q8TDN4 633 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms