RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 V9GY48 417 aaPredicted RBP13.29□□□□□ -0.28
LINC01108-202ENST00000635227 CD2BP2O95400 341 aaKnown RBP13.28□□□□□ -0.28
LINC01108-202ENST00000635227 TBC1D2BQ9UPU7 963 aa13.28□□□□□ -0.28
LINC01108-202ENST00000635227 APBB1O00213 710 aa13.27□□□□□ -0.29
LINC01108-202ENST00000635227 GPR37L1O60883 481 aa13.27□□□□□ -0.29
LINC01108-202ENST00000635227 NDUFB9Q9Y6M9 179 aa13.27□□□□□ -0.29
LINC01108-202ENST00000635227 SH3BP2P78314 561 aa13.26□□□□□ -0.29
LINC01108-202ENST00000635227 SKOR1P84550 965 aa13.26□□□□□ -0.29
LINC01108-202ENST00000635227 ZNF511Q8NB15 262 aa13.26□□□□□ -0.29
LINC01108-202ENST00000635227 ARMC2Q8NEN0 867 aa13.26□□□□□ -0.29
LINC01108-202ENST00000635227 POM121Q96HA1 1249 aa13.26□□□□□ -0.29
LINC01108-202ENST00000635227 GDPD2Q9HCC8 539 aa13.25□□□□□ -0.29
LINC01108-202ENST00000635227 RGS20O76081 388 aa13.24□□□□□ -0.29
LINC01108-202ENST00000635227 UBTFP17480 764 aaKnown RBP13.24□□□□□ -0.29
LINC01108-202ENST00000635227 COG6Q9Y2V7 657 aa13.24□□□□□ -0.29
LINC01108-202ENST00000635227 ZNF697Q5TEC3 545 aa13.23□□□□□ -0.29
LINC01108-202ENST00000635227 NBPF14Q5TI25 921 aa13.23□□□□□ -0.29
LINC01108-202ENST00000635227 ZNF598Q86UK7 904 aaKnown RBP13.23□□□□□ -0.29
LINC01108-202ENST00000635227 FOXJ1Q92949 421 aa13.23□□□□□ -0.29
LINC01108-202ENST00000635227 WNT7BP56706 349 aa13.22□□□□□ -0.29
LINC01108-202ENST00000635227 ZC3H4Q9UPT8 1303 aaKnown RBP13.21□□□□□ -0.29
LINC01108-202ENST00000635227 PNMA1Q8ND90 353 aa13.21□□□□□ -0.29
LINC01108-202ENST00000635227 GPKOWQ92917 476 aaPredicted RBP eCLIP13.21□□□□□ -0.29
LINC01108-202ENST00000635227 CLUAP1Q96AJ1 413 aa13.21□□□□□ -0.29
LINC01108-202ENST00000635227 PDXDC2PQ6P474 469 aa13.2□□□□□ -0.3
LINC01108-202ENST00000635227 PRM3Q9NNZ6 103 aa13.2□□□□□ -0.3
LINC01108-202ENST00000635227 ABL2P42684 1182 aa13.19□□□□□ -0.3
LINC01108-202ENST00000635227 C4orf48Q5BLP8 95 aa13.19□□□□□ -0.3
LINC01108-202ENST00000635227 SH3BP5LQ7L8J4 393 aa13.19□□□□□ -0.3
LINC01108-202ENST00000635227 IRF5Q13568 498 aa13.18□□□□□ -0.3
LINC01108-202ENST00000635227 RC3H1Q5TC82 1133 aaKnown RBP13.18□□□□□ -0.3
LINC01108-202ENST00000635227 OCSTAMPQ9BR26 566 aa13.18□□□□□ -0.3
LINC01108-202ENST00000635227 AGERQ15109 404 aa13.17□□□□□ -0.3
LINC01108-202ENST00000635227 SH3RF1Q7Z6J0 888 aa13.17□□□□□ -0.3
LINC01108-202ENST00000635227 PKD2L1Q9P0L9 805 aa13.17□□□□□ -0.3
LINC01108-202ENST00000635227 RAD21O60216 631 aa13.16□□□□□ -0.3
LINC01108-202ENST00000635227 FOXC1Q12948 553 aa13.16□□□□□ -0.3
LINC01108-202ENST00000635227 BPHLQ86WA6 291 aaPredicted RBP13.16□□□□□ -0.3
LINC01108-202ENST00000635227 MAGEB6P1A0A0J9YX57 407 aa13.15□□□□□ -0.3
LINC01108-202ENST00000635227 WNT7AO00755 349 aa13.15□□□□□ -0.3
LINC01108-202ENST00000635227 TRIM67Q6ZTA4 783 aa13.15□□□□□ -0.3
LINC01108-202ENST00000635227 ARHGAP9Q9BRR9 750 aa13.15□□□□□ -0.3
LINC01108-202ENST00000635227 PTK2Q05397 1052 aa13.14□□□□□ -0.31
LINC01108-202ENST00000635227 EHBP1Q8NDI1 1231 aa13.14□□□□□ -0.31
LINC01108-202ENST00000635227 MRGPRX2Q96LB1 330 aa13.14□□□□□ -0.31
LINC01108-202ENST00000635227 CARD14Q9BXL6 1004 aa13.14□□□□□ -0.31
LINC01108-202ENST00000635227 GDF9O60383 454 aa13.13□□□□□ -0.31
LINC01108-202ENST00000635227 FBXO45P0C2W1 286 aa13.13□□□□□ -0.31
LINC01108-202ENST00000635227 GPSM3Q9Y4H4 160 aa13.13□□□□□ -0.31
LINC01108-202ENST00000635227 ZBBXA8MT70 800 aa13.12□□□□□ -0.31
LINC01108-202ENST00000635227 TNFRSF10AO00220 468 aa13.12□□□□□ -0.31
LINC01108-202ENST00000635227 RB1CC1Q8TDY2 1594 aa13.11□□□□□ -0.31
LINC01108-202ENST00000635227 CECR2Q9BXF3 1484 aa13.11□□□□□ -0.31
LINC01108-202ENST00000635227 VARSP26640 1264 aaKnown RBP13.11□□□□□ -0.31
LINC01108-202ENST00000635227 ADAM32Q8TC27 787 aa13.1□□□□□ -0.31
LINC01108-202ENST00000635227 SIAH2O43255 324 aa13.09□□□□□ -0.31
LINC01108-202ENST00000635227 NR1H3Q13133 447 aa13.09□□□□□ -0.31
LINC01108-202ENST00000635227 ERFEQ4G0M1 354 aa13.09□□□□□ -0.31
LINC01108-202ENST00000635227 ZBTB33Q86T24 672 aa13.09□□□□□ -0.31
LINC01108-202ENST00000635227 C1QTNF2Q9BXJ5 285 aa13.09□□□□□ -0.31
LINC01108-202ENST00000635227 VAC14Q08AM6 782 aa13.08□□□□□ -0.32
LINC01108-202ENST00000635227 A6NJR5 290 aa13.07□□□□□ -0.32
LINC01108-202ENST00000635227 C14orf37Q86TY3 774 aa13.07□□□□□ -0.32
LINC01108-202ENST00000635227 PROSER2Q86WR7 435 aaPredicted RBP13.07□□□□□ -0.32
LINC01108-202ENST00000635227 FNBP4Q8N3X1 1017 aaPredicted RBP13.07□□□□□ -0.32
LINC01108-202ENST00000635227 TLL2Q9Y6L7 1015 aa13.07□□□□□ -0.32
LINC01108-202ENST00000635227 PRR20EP86478 221 aa13.06□□□□□ -0.32
LINC01108-202ENST00000635227 PRR20CP86479 221 aa13.06□□□□□ -0.32
LINC01108-202ENST00000635227 PRR20DP86480 221 aa13.06□□□□□ -0.32
LINC01108-202ENST00000635227 PRR20BP86481 221 aa13.06□□□□□ -0.32
LINC01108-202ENST00000635227 PRR20AP86496 221 aa13.06□□□□□ -0.32
LINC01108-202ENST00000635227 FAM174AQ8TBP5 190 aa13.06□□□□□ -0.32
LINC01108-202ENST00000635227 PDZRN3Q9UPQ7 1066 aa13.05□□□□□ -0.32
LINC01108-202ENST00000635227 ZMYND15Q9H091 742 aa13.04□□□□□ -0.32
LINC01108-202ENST00000635227 WASHC4Q2M389 1173 aa13.03□□□□□ -0.32
LINC01108-202ENST00000635227 TRMT44Q8IYL2 757 aaKnown RBP13.03□□□□□ -0.32
LINC01108-202ENST00000635227 TOR4AQ9NXH8 423 aa13.03□□□□□ -0.32
LINC01108-202ENST00000635227 POM121CA8CG34 1229 aa13.01□□□□□ -0.33
LINC01108-202ENST00000635227 ARID5BQ14865 1188 aa13.01□□□□□ -0.33
LINC01108-202ENST00000635227 WWC1Q8IX03 1113 aa13.01□□□□□ -0.33
LINC01108-202ENST00000635227 CYP4X1Q8N118 509 aa13.01□□□□□ -0.33
LINC01108-202ENST00000635227 SNIP1Q8TAD8 396 aaKnown RBP13.01□□□□□ -0.33
LINC01108-202ENST00000635227 SLC10A4Q96EP9 437 aa13.01□□□□□ -0.33
LINC01108-202ENST00000635227 TIMELESSQ9UNS1 1208 aa13.01□□□□□ -0.33
LINC01108-202ENST00000635227 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
LINC01108-202ENST00000635227 PCDHB9Q9Y5E1 797 aa13.01□□□□□ -0.33
LINC01108-202ENST00000635227 ALDH1A1P00352 501 aa13□□□□□ -0.33
LINC01108-202ENST00000635227 TTC24A2A3L6 582 aaPredicted RBP12.99□□□□□ -0.33
LINC01108-202ENST00000635227 J3QL48 77 aa12.99□□□□□ -0.33
LINC01108-202ENST00000635227 DZIP3Q86Y13 1208 aaKnown RBP12.99□□□□□ -0.33
LINC01108-202ENST00000635227 MPNDQ8N594 471 aa12.99□□□□□ -0.33
LINC01108-202ENST00000635227 CDK15Q96Q40 435 aa12.99□□□□□ -0.33
LINC01108-202ENST00000635227 TRAK2O60296 914 aa12.98□□□□□ -0.33
LINC01108-202ENST00000635227 GFRA3O60609 400 aa12.98□□□□□ -0.33
LINC01108-202ENST00000635227 CC2D2AQ9P2K1 1620 aa12.98□□□□□ -0.33
LINC01108-202ENST00000635227 CUX2O14529 1486 aa12.97□□□□□ -0.33
LINC01108-202ENST00000635227 EIF4G2P78344 907 aaKnown RBP eCLIP12.97□□□□□ -0.33
LINC01108-202ENST00000635227 VASH1Q7L8A9 365 aaPredicted RBP12.97□□□□□ -0.33
LINC01108-202ENST00000635227 GRM5P41594 1212 aa12.96□□□□□ -0.33
LINC01108-202ENST00000635227 MAP4K5Q9Y4K4 846 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 1349.8 ms