RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 WDR78Q5VTH9 848 aa6.38□□□□□ -1.39
SDCBP-213ENST00000630925 FTSJ3Q8IY81 847 aaKnown RBP6.38□□□□□ -1.39
SDCBP-213ENST00000630925 RPUSD2Q8IZ73 545 aaKnown RBP6.38□□□□□ -1.39
SDCBP-213ENST00000630925 SENP7Q9BQF6 1050 aa6.38□□□□□ -1.39
SDCBP-213ENST00000630925 ERCC6L2Q5T890 1561 aa6.38□□□□□ -1.39
SDCBP-213ENST00000630925 DCAF1Q9Y4B6 1507 aa6.38□□□□□ -1.39
SDCBP-213ENST00000630925 PALM3A6NDB9 673 aaPredicted RBP6.38□□□□□ -1.39
SDCBP-213ENST00000630925 PAK3O75914 559 aaPredicted RBP6.38□□□□□ -1.39
SDCBP-213ENST00000630925 TINF2Q9BSI4 451 aa6.38□□□□□ -1.39
SDCBP-213ENST00000630925 JADE2Q9NQC1 790 aa6.38□□□□□ -1.39
SDCBP-213ENST00000630925 HOXA2O43364 376 aa6.37□□□□□ -1.39
SDCBP-213ENST00000630925 PRR12Q9ULL5 1215 aa6.37□□□□□ -1.39
SDCBP-213ENST00000630925 WDHD1O75717 1129 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-213ENST00000630925 LMOD1P29536 600 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-213ENST00000630925 EVA1CP58658 441 aa6.37□□□□□ -1.39
SDCBP-213ENST00000630925 CCAR1Q8IX12 1150 aaKnown RBP6.37□□□□□ -1.39
SDCBP-213ENST00000630925 AMOTL1Q8IY63 956 aa6.37□□□□□ -1.39
SDCBP-213ENST00000630925 FBXO22Q8NEZ5 403 aa6.37□□□□□ -1.39
SDCBP-213ENST00000630925 QTRT2Q9H974 415 aaKnown RBP6.37□□□□□ -1.39
SDCBP-213ENST00000630925 PRKAG2Q9UGJ0 569 aa6.37□□□□□ -1.39
SDCBP-213ENST00000630925 COL4A3BPQ9Y5P4 624 aa6.37□□□□□ -1.39
SDCBP-213ENST00000630925 SOX12O15370 315 aa6.36□□□□□ -1.39
SDCBP-213ENST00000630925 PYGBP11216 843 aa6.36□□□□□ -1.39
SDCBP-213ENST00000630925 CDCA8Q53HL2 280 aa6.36□□□□□ -1.39
SDCBP-213ENST00000630925 C9orf131Q5VYM1 1079 aa6.36□□□□□ -1.39
SDCBP-213ENST00000630925 STAG1Q8WVM7 1258 aa6.36□□□□□ -1.39
SDCBP-213ENST00000630925 JAZF1Q86VZ6 243 aa6.35□□□□□ -1.39
SDCBP-213ENST00000630925 ZCRB1Q8TBF4 217 aaKnown RBP6.35□□□□□ -1.39
SDCBP-213ENST00000630925 SCYL1Q96KG9 808 aa6.35□□□□□ -1.39
SDCBP-213ENST00000630925 CCDC85AQ96PX6 553 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-213ENST00000630925 RPS6KC1Q96S38 1066 aa6.35□□□□□ -1.39
SDCBP-213ENST00000630925 BACH2Q9BYV9 841 aa6.35□□□□□ -1.39
SDCBP-213ENST00000630925 ATP1B4Q9UN42 357 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-213ENST00000630925 EPB41L2O43491 1005 aaKnown RBP6.35□□□□□ -1.39
SDCBP-213ENST00000630925 SSFA2P28290 1259 aa6.35□□□□□ -1.39
SDCBP-213ENST00000630925 BIRC2Q13490 618 aa6.35□□□□□ -1.39
SDCBP-213ENST00000630925 PDIA6Q15084 440 aa6.35□□□□□ -1.39
SDCBP-213ENST00000630925 TMEM259Q4ZIN3 620 aa6.35□□□□□ -1.39
SDCBP-213ENST00000630925 MYSM1Q5VVJ2 828 aa6.35□□□□□ -1.39
SDCBP-213ENST00000630925 PCDH12Q9NPG4 1184 aa6.35□□□□□ -1.39
SDCBP-213ENST00000630925 BSDC1Q9NW68 430 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-213ENST00000630925 ARMC5Q96C12 935 aa6.34□□□□□ -1.39
SDCBP-213ENST00000630925 FBXO9Q9UK97 447 aaPredicted RBP6.34□□□□□ -1.39
SDCBP-213ENST00000630925 G3BP2Q9UN86 482 aaKnown RBP6.34□□□□□ -1.39
SDCBP-213ENST00000630925 CCDC189A1A4V9 331 aa6.34□□□□□ -1.4
SDCBP-213ENST00000630925 CFAP69A5D8W1 941 aa6.34□□□□□ -1.4
SDCBP-213ENST00000630925 ZNF500O60304 480 aaPredicted RBP6.34□□□□□ -1.4
SDCBP-213ENST00000630925 HIC1Q14526 733 aa6.34□□□□□ -1.4
SDCBP-213ENST00000630925 LDLRAD1Q5T700 205 aa6.34□□□□□ -1.4
SDCBP-213ENST00000630925 ZNF746Q6NUN9 644 aaPredicted RBP6.34□□□□□ -1.4
SDCBP-213ENST00000630925 UCN2Q96RP3 112 aa6.34□□□□□ -1.4
SDCBP-213ENST00000630925 IQSEC3Q9UPP2 1182 aaPredicted RBP6.34□□□□□ -1.4
SDCBP-213ENST00000630925 HECW2Q9P2P5 1572 aa6.33□□□□□ -1.4
SDCBP-213ENST00000630925 NUTM2FA1L443 756 aa6.33□□□□□ -1.4
SDCBP-213ENST00000630925 GALR2O43603 387 aaPredicted RBP6.33□□□□□ -1.4
SDCBP-213ENST00000630925 GTF2F1P35269 517 aaKnown RBP eCLIP6.33□□□□□ -1.4
SDCBP-213ENST00000630925 ARHGEF10LQ9HCE6 1279 aa6.33□□□□□ -1.4
SDCBP-213ENST00000630925 NRBP1Q9UHY1 535 aa6.33□□□□□ -1.4
SDCBP-213ENST00000630925 DMGDHQ9UI17 866 aaKnown RBP6.33□□□□□ -1.4
SDCBP-213ENST00000630925 POTEB2H3BUK9 544 aa6.32□□□□□ -1.4
SDCBP-213ENST00000630925 ANP32CO43423 234 aa6.32□□□□□ -1.4
SDCBP-213ENST00000630925 CALRP27797 417 aaKnown RBP6.32□□□□□ -1.4
SDCBP-213ENST00000630925 XPCQ01831 940 aaPredicted RBP6.32□□□□□ -1.4
SDCBP-213ENST00000630925 BMS1Q14692 1282 aaKnown RBP6.32□□□□□ -1.4
SDCBP-213ENST00000630925 SLC43A3Q8NBI5 491 aa6.32□□□□□ -1.4
SDCBP-213ENST00000630925 TMC2Q8TDI7 906 aa6.32□□□□□ -1.4
SDCBP-213ENST00000630925 SWAP70Q9UH65 585 aa6.32□□□□□ -1.4
SDCBP-213ENST00000630925 RSF1Q96T23 1441 aaPredicted RBP6.32□□□□□ -1.4
SDCBP-213ENST00000630925 SCAMP3O14828 347 aaKnown RBP6.32□□□□□ -1.4
SDCBP-213ENST00000630925 ATP2B1P20020 1258 aa6.32□□□□□ -1.4
SDCBP-213ENST00000630925 TMEM164Q5U3C3 297 aa6.32□□□□□ -1.4
SDCBP-213ENST00000630925 PPP2R2DQ66LE6 453 aa6.32□□□□□ -1.4
SDCBP-213ENST00000630925 ZNF280DQ6N043 979 aa6.32□□□□□ -1.4
SDCBP-213ENST00000630925 CXorf38Q8TB03 319 aa6.32□□□□□ -1.4
SDCBP-213ENST00000630925 BEGAINQ9BUH8 593 aa6.32□□□□□ -1.4
SDCBP-213ENST00000630925 ZSWIM4Q9H7M6 989 aa6.32□□□□□ -1.4
SDCBP-213ENST00000630925 DDX56Q9NY93 547 aaKnown RBP6.32□□□□□ -1.4
SDCBP-213ENST00000630925 TFIP11Q9UBB9 837 aaKnown RBP6.32□□□□□ -1.4
SDCBP-213ENST00000630925 ZMIZ1Q9ULJ6 1067 aa6.32□□□□□ -1.4
SDCBP-213ENST00000630925 DPYSL4O14531 572 aa6.31□□□□□ -1.4
SDCBP-213ENST00000630925 HSD3B2P26439 372 aa6.31□□□□□ -1.4
SDCBP-213ENST00000630925 DEKP35659 375 aaKnown RBP6.31□□□□□ -1.4
SDCBP-213ENST00000630925 SERPINB4P48594 390 aa6.31□□□□□ -1.4
SDCBP-213ENST00000630925 CLK2P49760 499 aaKnown RBP6.31□□□□□ -1.4
SDCBP-213ENST00000630925 MRPL58Q14197 206 aaKnown RBP6.31□□□□□ -1.4
SDCBP-213ENST00000630925 CCDC96Q2M329 555 aa6.31□□□□□ -1.4
SDCBP-213ENST00000630925 RNF187Q5TA31 235 aaPredicted RBP6.31□□□□□ -1.4
SDCBP-213ENST00000630925 FMNL3Q8IVF7 1028 aa6.31□□□□□ -1.4
SDCBP-213ENST00000630925 SPC25Q9HBM1 224 aa6.31□□□□□ -1.4
SDCBP-213ENST00000630925 IFT57Q9NWB7 429 aa6.31□□□□□ -1.4
SDCBP-213ENST00000630925 WWC3Q9ULE0 1092 aa6.31□□□□□ -1.4
SDCBP-213ENST00000630925 ZCCHC6Q5VYS8 1495 aaKnown RBP6.31□□□□□ -1.4
SDCBP-213ENST00000630925 SPDYE16A6NNV3 312 aaPredicted RBP6.3□□□□□ -1.4
SDCBP-213ENST00000630925 SSTR3P32745 418 aaPredicted RBP6.3□□□□□ -1.4
SDCBP-213ENST00000630925 RBL2Q08999 1139 aa6.3□□□□□ -1.4
SDCBP-213ENST00000630925 METTL16Q86W50 562 aaKnown RBP6.3□□□□□ -1.4
SDCBP-213ENST00000630925 RASEFQ8IZ41 740 aa6.3□□□□□ -1.4
SDCBP-213ENST00000630925 S100BP04271 92 aaPredicted RBP6.3□□□□□ -1.4
SDCBP-213ENST00000630925 SLC39A7Q92504 469 aa6.3□□□□□ -1.4
SDCBP-213ENST00000630925 TRIM34Q9BYJ4 488 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms