RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 NEUROD1Q13562 356 aa13.02□□□□□ -0.33
SPTAN1-219ENST00000629378 SEPT12Q8IYM1 358 aa13.02□□□□□ -0.33
SPTAN1-219ENST00000629378 L3MBTL2Q969R5 705 aa13.02□□□□□ -0.33
SPTAN1-219ENST00000629378 BTG4Q9NY30 223 aa13.02□□□□□ -0.33
SPTAN1-219ENST00000629378 CLSPNQ9HAW4 1339 aa13.02□□□□□ -0.33
SPTAN1-219ENST00000629378 EIF3AQ14152 1382 aaKnown RBP13.02□□□□□ -0.33
SPTAN1-219ENST00000629378 ATP7BP35670 1465 aa13.02□□□□□ -0.33
SPTAN1-219ENST00000629378 NWD2Q9ULI1 1742 aa13.02□□□□□ -0.33
SPTAN1-219ENST00000629378 ITSN1Q15811 1721 aa13.01□□□□□ -0.33
SPTAN1-219ENST00000629378 CRYBG1Q9Y4K1 1723 aa13□□□□□ -0.33
SPTAN1-219ENST00000629378 ACEP12821 1306 aa13□□□□□ -0.33
SPTAN1-219ENST00000629378 NBPF8Q3BBV2 869 aa13□□□□□ -0.33
SPTAN1-219ENST00000629378 NRAPQ86VF7 1730 aa12.99□□□□□ -0.33
SPTAN1-219ENST00000629378 CABP2Q9NPB3 220 aa12.99□□□□□ -0.33
SPTAN1-219ENST00000629378 ONECUT3O60422 494 aaPredicted RBP12.98□□□□□ -0.33
SPTAN1-219ENST00000629378 CHRNA2Q15822 529 aa12.98□□□□□ -0.33
SPTAN1-219ENST00000629378 FAM98CQ17RN3 349 aaKnown RBP12.98□□□□□ -0.33
SPTAN1-219ENST00000629378 CCDC61Q9Y6R9 512 aa12.98□□□□□ -0.33
SPTAN1-219ENST00000629378 COL14A1Q05707 1796 aaKnown RBP12.98□□□□□ -0.33
SPTAN1-219ENST00000629378 TOPAZ1Q8N9V7 1692 aa12.98□□□□□ -0.33
SPTAN1-219ENST00000629378 PLEKHG3A1L390 1219 aa12.97□□□□□ -0.33
SPTAN1-219ENST00000629378 ZC3H6P61129 1189 aaKnown RBP12.97□□□□□ -0.33
SPTAN1-219ENST00000629378 SRPK2P78362 688 aaKnown RBP12.97□□□□□ -0.33
SPTAN1-219ENST00000629378 CENPJQ9HC77 1338 aaPredicted RBP12.96□□□□□ -0.33
SPTAN1-219ENST00000629378 A0A0G2JS52 829 aa12.96□□□□□ -0.33
SPTAN1-219ENST00000629378 MYT1Q01538 1121 aa12.96□□□□□ -0.33
SPTAN1-219ENST00000629378 FAM182BQ5T319 152 aa12.96□□□□□ -0.33
SPTAN1-219ENST00000629378 KRT27Q7Z3Y8 459 aa12.96□□□□□ -0.33
SPTAN1-219ENST00000629378 DEFB132Q7Z7B7 95 aa12.96□□□□□ -0.33
SPTAN1-219ENST00000629378 CCDC125Q86Z20 511 aa12.96□□□□□ -0.33
SPTAN1-219ENST00000629378 QRICH2Q9H0J4 1663 aa12.96□□□□□ -0.34
SPTAN1-219ENST00000629378 POLR3AO14802 1390 aaPredicted RBP12.95□□□□□ -0.34
SPTAN1-219ENST00000629378 KIAA0232Q92628 1395 aa12.95□□□□□ -0.34
SPTAN1-219ENST00000629378 PRDM11Q9NQV5 511 aa12.95□□□□□ -0.34
SPTAN1-219ENST00000629378 PHRF1Q9P1Y6 1649 aaKnown RBP12.95□□□□□ -0.34
SPTAN1-219ENST00000629378 ABTB2Q8N961 1025 aa12.94□□□□□ -0.34
SPTAN1-219ENST00000629378 STRN4Q9NRL3 753 aa12.94□□□□□ -0.34
SPTAN1-219ENST00000629378 CABP1Q9NZU7 370 aa12.94□□□□□ -0.34
SPTAN1-219ENST00000629378 PPIP5K1Q6PFW1 1433 aa12.94□□□□□ -0.34
SPTAN1-219ENST00000629378 SPATA31A5Q5VU36 1347 aa12.93□□□□□ -0.34
SPTAN1-219ENST00000629378 SPATA31A7Q8IWB4 1347 aa12.93□□□□□ -0.34
SPTAN1-219ENST00000629378 TRPM1Q7Z4N2 1603 aa12.93□□□□□ -0.34
SPTAN1-219ENST00000629378 BLMP54132 1417 aaPredicted RBP12.92□□□□□ -0.34
SPTAN1-219ENST00000629378 ZRANB1Q9UGI0 708 aa12.92□□□□□ -0.34
SPTAN1-219ENST00000629378 USP35Q9P2H5 1018 aa12.91□□□□□ -0.34
SPTAN1-219ENST00000629378 EVA1CP58658 441 aa12.9□□□□□ -0.34
SPTAN1-219ENST00000629378 SPATA31A1Q5TZJ5 1347 aa12.89□□□□□ -0.35
SPTAN1-219ENST00000629378 ZBTB7CA1YPR0 619 aa12.89□□□□□ -0.35
SPTAN1-219ENST00000629378 SF3B2Q13435 895 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-219ENST00000629378 ROCK2O75116 1388 aaKnown RBP12.89□□□□□ -0.35
SPTAN1-219ENST00000629378 NRKQ7Z2Y5 1582 aa12.89□□□□□ -0.35
SPTAN1-219ENST00000629378 CAMTA1Q9Y6Y1 1673 aa12.89□□□□□ -0.35
SPTAN1-219ENST00000629378 GCP02774 474 aa12.88□□□□□ -0.35
SPTAN1-219ENST00000629378 LARP1Q6PKG0 1096 aaKnown RBP12.88□□□□□ -0.35
SPTAN1-219ENST00000629378 NLRP13Q86W25 1043 aa12.88□□□□□ -0.35
SPTAN1-219ENST00000629378 USP19O94966 1318 aa12.88□□□□□ -0.35
SPTAN1-219ENST00000629378 EVC2Q86UK5 1308 aa12.88□□□□□ -0.35
SPTAN1-219ENST00000629378 THSD7AQ9UPZ6 1657 aa12.87□□□□□ -0.35
SPTAN1-219ENST00000629378 NLRP6P59044 892 aa12.87□□□□□ -0.35
SPTAN1-219ENST00000629378 SRCAPQ6ZRS2 3230 aa12.86□□□□□ -0.35
SPTAN1-219ENST00000629378 USP6P35125 1406 aa12.86□□□□□ -0.35
SPTAN1-219ENST00000629378 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
SPTAN1-219ENST00000629378 LMO7Q8WWI1 1683 aa12.85□□□□□ -0.35
SPTAN1-219ENST00000629378 SSH2Q76I76 1423 aa12.85□□□□□ -0.35
SPTAN1-219ENST00000629378 CPDO75976 1380 aa12.84□□□□□ -0.35
SPTAN1-219ENST00000629378 PIK3C2AO00443 1686 aa12.83□□□□□ -0.35
SPTAN1-219ENST00000629378 PSDA5PKW4 1024 aaPredicted RBP12.83□□□□□ -0.36
SPTAN1-219ENST00000629378 SOX12O15370 315 aa12.83□□□□□ -0.36
SPTAN1-219ENST00000629378 TRIM37O94972 964 aa12.83□□□□□ -0.36
SPTAN1-219ENST00000629378 AKAP12Q02952 1782 aa12.83□□□□□ -0.36
SPTAN1-219ENST00000629378 TTC21BQ7Z4L5 1316 aa12.83□□□□□ -0.36
SPTAN1-219ENST00000629378 RGPD5Q99666 1765 aa12.82□□□□□ -0.36
SPTAN1-219ENST00000629378 BAG6P46379 1132 aa12.82□□□□□ -0.36
SPTAN1-219ENST00000629378 BARGINQ6ZT62 677 aa12.82□□□□□ -0.36
SPTAN1-219ENST00000629378 CARD11Q9BXL7 1154 aa12.82□□□□□ -0.36
SPTAN1-219ENST00000629378 AXIN2Q9Y2T1 843 aa12.82□□□□□ -0.36
SPTAN1-219ENST00000629378 RGPD1P0DJD0 1748 aa12.82□□□□□ -0.36
SPTAN1-219ENST00000629378 EZH2Q15910 746 aaKnown RBP12.81□□□□□ -0.36
SPTAN1-219ENST00000629378 TCP11L2Q8N4U5 519 aa12.81□□□□□ -0.36
SPTAN1-219ENST00000629378 ZNF692Q9BU19 519 aaPredicted RBP12.81□□□□□ -0.36
SPTAN1-219ENST00000629378 TIMELESSQ9UNS1 1208 aa12.81□□□□□ -0.36
SPTAN1-219ENST00000629378 TNS1Q9HBL0 1735 aaKnown RBP12.81□□□□□ -0.36
SPTAN1-219ENST00000629378 COL18A1P39060 1754 aa12.81□□□□□ -0.36
SPTAN1-219ENST00000629378 BRD4O60885 1362 aaPredicted RBP12.81□□□□□ -0.36
SPTAN1-219ENST00000629378 COL5A2P05997 1499 aaPredicted RBP12.8□□□□□ -0.36
SPTAN1-219ENST00000629378 SLIT3O75094 1523 aa12.8□□□□□ -0.36
SPTAN1-219ENST00000629378 PDE3BQ13370 1112 aa12.8□□□□□ -0.36
SPTAN1-219ENST00000629378 FAM196AQ6ZSG2 479 aa12.8□□□□□ -0.36
SPTAN1-219ENST00000629378 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.79□□□□□ -0.36
SPTAN1-219ENST00000629378 KTN1Q86UP2 1357 aaKnown RBP12.79□□□□□ -0.36
SPTAN1-219ENST00000629378 TONSLQ96HA7 1378 aa12.79□□□□□ -0.36
SPTAN1-219ENST00000629378 CPSF1Q10570 1443 aaKnown RBP12.79□□□□□ -0.36
SPTAN1-219ENST00000629378 APBA3O96018 575 aa12.78□□□□□ -0.36
SPTAN1-219ENST00000629378 TMC1Q8TDI8 760 aa12.78□□□□□ -0.36
SPTAN1-219ENST00000629378 SLC12A5Q9H2X9 1139 aa12.78□□□□□ -0.36
SPTAN1-219ENST00000629378 AATKQ6ZMQ8 1374 aa12.78□□□□□ -0.36
SPTAN1-219ENST00000629378 TOM1L2Q6ZVM7 507 aa12.77□□□□□ -0.37
SPTAN1-219ENST00000629378 ARHGEF25Q86VW2 580 aa12.77□□□□□ -0.37
SPTAN1-219ENST00000629378 CAMKK2Q96RR4 588 aa12.77□□□□□ -0.37
SPTAN1-219ENST00000629378 THRAP3Q9Y2W1 955 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms