RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 BBXQ8WY36 941 aaPredicted RBP3.98□□□□□ -1.77
SPTAN1-216ENST00000629047 BAP1Q92560 729 aa3.98□□□□□ -1.77
SPTAN1-216ENST00000629047 MSTNO14793 375 aa3.97□□□□□ -1.77
SPTAN1-216ENST00000629047 SEMA3EO15041 775 aa3.97□□□□□ -1.77
SPTAN1-216ENST00000629047 BMP2P12643 396 aa3.97□□□□□ -1.77
SPTAN1-216ENST00000629047 MARSP56192 900 aaKnown RBP3.97□□□□□ -1.77
SPTAN1-216ENST00000629047 LYPD4Q6UWN0 246 aa3.97□□□□□ -1.77
SPTAN1-216ENST00000629047 SULF1Q8IWU6 871 aa3.97□□□□□ -1.77
SPTAN1-216ENST00000629047 SPRYD3Q8NCJ5 442 aa3.97□□□□□ -1.77
SPTAN1-216ENST00000629047 KRTAP4-12Q9BQ66 201 aa3.97□□□□□ -1.77
SPTAN1-216ENST00000629047 UNC93B1Q9H1C4 597 aa3.97□□□□□ -1.77
SPTAN1-216ENST00000629047 SOS2Q07890 1332 aaPredicted RBP3.96□□□□□ -1.77
SPTAN1-216ENST00000629047 GNPATO15228 680 aa3.96□□□□□ -1.78
SPTAN1-216ENST00000629047 HOXA2O43364 376 aa3.96□□□□□ -1.78
SPTAN1-216ENST00000629047 KDM4AO75164 1064 aa3.96□□□□□ -1.78
SPTAN1-216ENST00000629047 FOXK2Q01167 660 aa3.96□□□□□ -1.78
SPTAN1-216ENST00000629047 GRIPAP1Q4V328 841 aa3.96□□□□□ -1.78
SPTAN1-216ENST00000629047 KANK3Q6NY19 840 aa3.96□□□□□ -1.78
SPTAN1-216ENST00000629047 LINC00528Q8N1L1 170 aa3.96□□□□□ -1.78
SPTAN1-216ENST00000629047 DCAF5Q96JK2 942 aa3.96□□□□□ -1.78
SPTAN1-216ENST00000629047 KRTAP9-9Q9BYP9 154 aa3.96□□□□□ -1.78
SPTAN1-216ENST00000629047 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
SPTAN1-216ENST00000629047 FIGNL2A6NMB9 653 aa3.95□□□□□ -1.78
SPTAN1-216ENST00000629047 SLURP2P0DP57 97 aa3.95□□□□□ -1.78
SPTAN1-216ENST00000629047 PTSQ03393 145 aa3.95□□□□□ -1.78
SPTAN1-216ENST00000629047 ZNF511Q8NB15 262 aa3.95□□□□□ -1.78
SPTAN1-216ENST00000629047 ARHGEF1Q92888 912 aaKnown RBP3.95□□□□□ -1.78
SPTAN1-216ENST00000629047 CFAP44Q96MT7 982 aa3.95□□□□□ -1.78
SPTAN1-216ENST00000629047 CNTNAP5Q8WYK1 1306 aa3.95□□□□□ -1.78
SPTAN1-216ENST00000629047 K7ELQ4 463 aaPredicted RBP3.94□□□□□ -1.78
SPTAN1-216ENST00000629047 CCNYL3P0C7X3 344 aa3.94□□□□□ -1.78
SPTAN1-216ENST00000629047 ARID5BQ14865 1188 aa3.94□□□□□ -1.78
SPTAN1-216ENST00000629047 PAXIP1Q6ZW49 1069 aaPredicted RBP3.94□□□□□ -1.78
SPTAN1-216ENST00000629047 VWA5B2Q8N398 1253 aa3.94□□□□□ -1.78
SPTAN1-216ENST00000629047 MEIOBQ8N635 442 aa3.94□□□□□ -1.78
SPTAN1-216ENST00000629047 FOXJ1Q92949 421 aa3.94□□□□□ -1.78
SPTAN1-216ENST00000629047 CDC14CA4D256 554 aa3.93□□□□□ -1.78
SPTAN1-216ENST00000629047 ADAMTS2O95450 1211 aa3.93□□□□□ -1.78
SPTAN1-216ENST00000629047 CCDC155Q8N6L0 562 aa3.93□□□□□ -1.78
SPTAN1-216ENST00000629047 PCDHGC3Q9UN70 934 aa3.93□□□□□ -1.78
SPTAN1-216ENST00000629047 FURINP09958 794 aa3.92□□□□□ -1.78
SPTAN1-216ENST00000629047 MS4A1P11836 297 aa3.92□□□□□ -1.78
SPTAN1-216ENST00000629047 C4orf48Q5BLP8 95 aa3.92□□□□□ -1.78
SPTAN1-216ENST00000629047 SH3RF1Q7Z6J0 888 aa3.92□□□□□ -1.78
SPTAN1-216ENST00000629047 GALNT6Q8NCL4 622 aa3.92□□□□□ -1.78
SPTAN1-216ENST00000629047 SCARF2Q96GP6 870 aaPredicted RBP3.92□□□□□ -1.78
SPTAN1-216ENST00000629047 PLEKHG3A1L390 1219 aa3.91□□□□□ -1.78
SPTAN1-216ENST00000629047 CELA2BP08218 269 aaPredicted RBP3.91□□□□□ -1.78
SPTAN1-216ENST00000629047 ITGB7P26010 798 aa3.91□□□□□ -1.78
SPTAN1-216ENST00000629047 VARSP26640 1264 aaKnown RBP3.91□□□□□ -1.78
SPTAN1-216ENST00000629047 GAS6Q14393 721 aa3.91□□□□□ -1.78
SPTAN1-216ENST00000629047 RETREG3Q86VR2 466 aa3.91□□□□□ -1.78
SPTAN1-216ENST00000629047 NANOS1Q8WY41 292 aaKnown RBP3.91□□□□□ -1.78
SPTAN1-216ENST00000629047 TTLL8A6PVC2 850 aa3.9□□□□□ -1.79
SPTAN1-216ENST00000629047 GRM5P41594 1212 aa3.9□□□□□ -1.79
SPTAN1-216ENST00000629047 BAG6P46379 1132 aa3.9□□□□□ -1.79
SPTAN1-216ENST00000629047 MPNDQ8N594 471 aa3.9□□□□□ -1.79
SPTAN1-216ENST00000629047 CUEDC1Q9NWM3 386 aaPredicted RBP3.9□□□□□ -1.79
SPTAN1-216ENST00000629047 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
SPTAN1-216ENST00000629047 SLC35F4A4IF30 521 aa3.89□□□□□ -1.79
SPTAN1-216ENST00000629047 ITGA6P23229 1130 aa3.89□□□□□ -1.79
SPTAN1-216ENST00000629047 MDM2Q00987 491 aaPredicted RBP3.89□□□□□ -1.79
SPTAN1-216ENST00000629047 KCNH2Q12809 1159 aa3.89□□□□□ -1.79
SPTAN1-216ENST00000629047 CBLBQ13191 982 aa3.89□□□□□ -1.79
SPTAN1-216ENST00000629047 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.89□□□□□ -1.79
SPTAN1-216ENST00000629047 CDK15Q96Q40 435 aa3.89□□□□□ -1.79
SPTAN1-216ENST00000629047 EVA1BQ9NVM1 165 aa3.89□□□□□ -1.79
SPTAN1-216ENST00000629047 KRBA1A5PL33 1030 aa3.88□□□□□ -1.79
SPTAN1-216ENST00000629047 C6orf229H3BNL8 230 aa3.88□□□□□ -1.79
SPTAN1-216ENST00000629047 PTPRNQ16849 979 aa3.88□□□□□ -1.79
SPTAN1-216ENST00000629047 FAM174AQ8TBP5 190 aa3.88□□□□□ -1.79
SPTAN1-216ENST00000629047 SENP3-EIF4A1A0A087X0R7 540 aa3.87□□□□□ -1.79
SPTAN1-216ENST00000629047 UPP2O95045 317 aa3.87□□□□□ -1.79
SPTAN1-216ENST00000629047 FSHRP23945 695 aa3.87□□□□□ -1.79
SPTAN1-216ENST00000629047 USP46P62068 366 aa3.87□□□□□ -1.79
SPTAN1-216ENST00000629047 SV2AQ7L0J3 742 aa3.87□□□□□ -1.79
SPTAN1-216ENST00000629047 KRTAP19-1Q8IUB9 90 aa3.87□□□□□ -1.79
SPTAN1-216ENST00000629047 MAP10Q9P2G4 905 aa3.87□□□□□ -1.79
SPTAN1-216ENST00000629047 FDX1P10109 184 aa3.86□□□□□ -1.79
SPTAN1-216ENST00000629047 NDUFV2P19404 249 aa3.86□□□□□ -1.79
SPTAN1-216ENST00000629047 MAP3K10Q02779 954 aa3.86□□□□□ -1.79
SPTAN1-216ENST00000629047 PRR7Q8TB68 274 aa3.86□□□□□ -1.79
SPTAN1-216ENST00000629047 TSHZ2Q9NRE2 1034 aa3.86□□□□□ -1.79
SPTAN1-216ENST00000629047 TESPA1A2RU30 521 aaPredicted RBP3.85□□□□□ -1.79
SPTAN1-216ENST00000629047 GPR25O00155 361 aa3.85□□□□□ -1.79
SPTAN1-216ENST00000629047 CTSOP43234 321 aaPredicted RBP3.85□□□□□ -1.79
SPTAN1-216ENST00000629047 NR5A1Q13285 461 aa3.85□□□□□ -1.79
SPTAN1-216ENST00000629047 AGBL1Q96MI9 1066 aa3.85□□□□□ -1.79
SPTAN1-216ENST00000629047 TSEN34Q9BSV6 310 aaKnown RBP3.85□□□□□ -1.79
SPTAN1-216ENST00000629047 CTHP32929 405 aa3.84□□□□□ -1.79
SPTAN1-216ENST00000629047 SNRPNP63162 240 aaKnown RBP3.84□□□□□ -1.79
SPTAN1-216ENST00000629047 SRSF11Q05519 484 aaKnown RBP3.84□□□□□ -1.79
SPTAN1-216ENST00000629047 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.84□□□□□ -1.79
SPTAN1-216ENST00000629047 PHF20L1A8MW92 1017 aa3.83□□□□□ -1.8
SPTAN1-216ENST00000629047 SPINT1O43278 529 aa3.83□□□□□ -1.8
SPTAN1-216ENST00000629047 COL8A1P27658 744 aa3.83□□□□□ -1.8
SPTAN1-216ENST00000629047 ACDQ96AP0 544 aa3.83□□□□□ -1.8
SPTAN1-216ENST00000629047 INSM2Q96T92 566 aaPredicted RBP3.83□□□□□ -1.8
SPTAN1-216ENST00000629047 IGF1RP08069 1367 aa3.82□□□□□ -1.8
SPTAN1-216ENST00000629047 MOXD2PA6NHM9 499 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms