RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 KIF3CO14782 793 aa9.76□□□□□ -0.85
LINC00649-220ENST00000628906 PROM2Q8N271 834 aa9.76□□□□□ -0.85
LINC00649-220ENST00000628906 ROBO2Q9HCK4 1378 aa9.75□□□□□ -0.85
LINC00649-220ENST00000628906 PDE3BQ13370 1112 aa9.75□□□□□ -0.85
LINC00649-220ENST00000628906 SPATA31A1Q5TZJ5 1347 aa9.75□□□□□ -0.85
LINC00649-220ENST00000628906 C11orf95C9JLR9 678 aaPredicted RBP9.74□□□□□ -0.85
LINC00649-220ENST00000628906 BCL11BQ9C0K0 894 aaPredicted RBP9.74□□□□□ -0.85
LINC00649-220ENST00000628906 ADCY9O60503 1353 aa9.74□□□□□ -0.85
LINC00649-220ENST00000628906 CCDC144AA2RUR9 1427 aa9.73□□□□□ -0.85
LINC00649-220ENST00000628906 SLC15A2Q16348 729 aa9.73□□□□□ -0.85
LINC00649-220ENST00000628906 PELP1Q8IZL8 1130 aaKnown RBP9.73□□□□□ -0.85
LINC00649-220ENST00000628906 RRBP1Q9P2E9 1410 aaKnown RBP9.73□□□□□ -0.85
LINC00649-220ENST00000628906 YBX3P16989 372 aaKnown RBP eCLIP9.72□□□□□ -0.85
LINC00649-220ENST00000628906 TNS3Q68CZ2 1445 aa9.72□□□□□ -0.85
LINC00649-220ENST00000628906 PRAG1Q86YV5 1406 aa9.72□□□□□ -0.85
LINC00649-220ENST00000628906 RGPD3A6NKT7 1758 aaPredicted RBP9.71□□□□□ -0.85
LINC00649-220ENST00000628906 RGPD4Q7Z3J3 1758 aa9.71□□□□□ -0.85
LINC00649-220ENST00000628906 TOMM70O94826 608 aa9.71□□□□□ -0.86
LINC00649-220ENST00000628906 PSME1Q06323 249 aa9.71□□□□□ -0.86
LINC00649-220ENST00000628906 BARGINQ6ZT62 677 aa9.71□□□□□ -0.86
LINC00649-220ENST00000628906 ZNF526Q8TF50 670 aaPredicted RBP9.71□□□□□ -0.86
LINC00649-220ENST00000628906 STK32BQ9NY57 414 aa9.71□□□□□ -0.86
LINC00649-220ENST00000628906 HFM1A2PYH4 1435 aa9.71□□□□□ -0.86
LINC00649-220ENST00000628906 MYOM3Q5VTT5 1437 aa9.71□□□□□ -0.86
LINC00649-220ENST00000628906 NPM3O75607 178 aaKnown RBP9.7□□□□□ -0.86
LINC00649-220ENST00000628906 PLEKHG5O94827 1062 aa9.7□□□□□ -0.86
LINC00649-220ENST00000628906 SBNO1A3KN83 1393 aa9.69□□□□□ -0.86
LINC00649-220ENST00000628906 ARHGEF10O15013 1369 aa9.69□□□□□ -0.86
LINC00649-220ENST00000628906 FAM161AQ3B820 660 aa9.69□□□□□ -0.86
LINC00649-220ENST00000628906 CDC42BPGQ6DT37 1551 aa9.69□□□□□ -0.86
LINC00649-220ENST00000628906 COL14A1Q05707 1796 aaKnown RBP9.68□□□□□ -0.86
LINC00649-220ENST00000628906 TNS2Q63HR2 1409 aa9.68□□□□□ -0.86
LINC00649-220ENST00000628906 NUTM2FA1L443 756 aa9.68□□□□□ -0.86
LINC00649-220ENST00000628906 HTRA3P83110 453 aa9.67□□□□□ -0.86
LINC00649-220ENST00000628906 NLGN2Q8NFZ4 835 aa9.67□□□□□ -0.86
LINC00649-220ENST00000628906 ABCA3Q99758 1704 aa9.67□□□□□ -0.86
LINC00649-220ENST00000628906 LMOD2Q6P5Q4 547 aa9.66□□□□□ -0.86
LINC00649-220ENST00000628906 POTEDQ86YR6 584 aa9.66□□□□□ -0.86
LINC00649-220ENST00000628906 WDR90Q96KV7 1748 aa9.65□□□□□ -0.86
LINC00649-220ENST00000628906 IQGAP3Q86VI3 1631 aa9.65□□□□□ -0.86
LINC00649-220ENST00000628906 HSPA1AP0DMV8 641 aaKnown RBP9.65□□□□□ -0.86
LINC00649-220ENST00000628906 HSPA1BP0DMV9 641 aaKnown RBP9.65□□□□□ -0.86
LINC00649-220ENST00000628906 TXNRD1Q16881 649 aa9.65□□□□□ -0.86
LINC00649-220ENST00000628906 PTF1AQ7RTS3 328 aa9.65□□□□□ -0.86
LINC00649-220ENST00000628906 KLHL34Q8N239 644 aa9.63□□□□□ -0.87
LINC00649-220ENST00000628906 SLC16A10Q8TF71 515 aa9.63□□□□□ -0.87
LINC00649-220ENST00000628906 PHF8Q9UPP1 1060 aa9.63□□□□□ -0.87
LINC00649-220ENST00000628906 TECPR2O15040 1411 aa9.63□□□□□ -0.87
LINC00649-220ENST00000628906 NAIPQ13075 1403 aa9.63□□□□□ -0.87
LINC00649-220ENST00000628906 DHX57Q6P158 1386 aaKnown RBP9.63□□□□□ -0.87
LINC00649-220ENST00000628906 KIF1AQ12756 1690 aa9.62□□□□□ -0.87
LINC00649-220ENST00000628906 ZNF326Q5BKZ1 582 aaKnown RBP9.62□□□□□ -0.87
LINC00649-220ENST00000628906 PRDM11Q9NQV5 511 aa9.62□□□□□ -0.87
LINC00649-220ENST00000628906 USP35Q9P2H5 1018 aa9.62□□□□□ -0.87
LINC00649-220ENST00000628906 ANKRD30AQ9BXX3 1397 aa9.62□□□□□ -0.87
LINC00649-220ENST00000628906 POLD1P28340 1107 aa9.61□□□□□ -0.87
LINC00649-220ENST00000628906 RGS19P49795 217 aa9.61□□□□□ -0.87
LINC00649-220ENST00000628906 TCP11L2Q8N4U5 519 aa9.61□□□□□ -0.87
LINC00649-220ENST00000628906 STRN4Q9NRL3 753 aa9.61□□□□□ -0.87
LINC00649-220ENST00000628906 THRAP3Q9Y2W1 955 aaKnown RBP9.61□□□□□ -0.87
LINC00649-220ENST00000628906 OVOS2A0A0G2JMS6 1433 aa9.6□□□□□ -0.87
LINC00649-220ENST00000628906 OVOS2A0A0J9YW53 1432 aa9.6□□□□□ -0.87
LINC00649-220ENST00000628906 OVOS2Q6IE36 1432 aa9.6□□□□□ -0.87
LINC00649-220ENST00000628906 MLLT1Q03111 559 aaPredicted RBP9.6□□□□□ -0.87
LINC00649-220ENST00000628906 RBM46Q8TBY0 533 aaKnown RBP9.6□□□□□ -0.87
LINC00649-220ENST00000628906 RNF216Q9NWF9 866 aaPredicted RBP9.6□□□□□ -0.87
LINC00649-220ENST00000628906 PEAK1Q9H792 1746 aa9.59□□□□□ -0.87
LINC00649-220ENST00000628906 SBF2Q86WG5 1849 aa9.59□□□□□ -0.88
LINC00649-220ENST00000628906 HOXD11P31277 338 aaPredicted RBP9.58□□□□□ -0.88
LINC00649-220ENST00000628906 FSTL1Q12841 308 aa9.58□□□□□ -0.88
LINC00649-220ENST00000628906 WAPLQ7Z5K2 1190 aa9.58□□□□□ -0.88
LINC00649-220ENST00000628906 CHIC2Q9UKJ5 165 aa9.58□□□□□ -0.88
LINC00649-220ENST00000628906 COL24A1Q17RW2 1714 aa9.57□□□□□ -0.88
LINC00649-220ENST00000628906 NRXN1Q9ULB1 1477 aa9.57□□□□□ -0.88
LINC00649-220ENST00000628906 E9PCH4 1651 aa9.57□□□□□ -0.88
LINC00649-220ENST00000628906 BCL9O00512 1426 aa9.56□□□□□ -0.88
LINC00649-220ENST00000628906 DAPK1P53355 1430 aa9.56□□□□□ -0.88
LINC00649-220ENST00000628906 VGFO15240 615 aaPredicted RBP9.56□□□□□ -0.88
LINC00649-220ENST00000628906 EVA1CP58658 441 aa9.56□□□□□ -0.88
LINC00649-220ENST00000628906 CHRNA2Q15822 529 aa9.56□□□□□ -0.88
LINC00649-220ENST00000628906 PMFBP1Q8TBY8 1022 aa9.56□□□□□ -0.88
LINC00649-220ENST00000628906 PRDM10Q9NQV6 1147 aa9.56□□□□□ -0.88
LINC00649-220ENST00000628906 SSH2Q76I76 1423 aa9.56□□□□□ -0.88
LINC00649-220ENST00000628906 KIAA0232Q92628 1395 aa9.55□□□□□ -0.88
LINC00649-220ENST00000628906 LARP1Q6PKG0 1096 aaKnown RBP9.55□□□□□ -0.88
LINC00649-220ENST00000628906 ARHGEF28Q8N1W1 1705 aaKnown RBP9.55□□□□□ -0.88
LINC00649-220ENST00000628906 PDE4DIPQ5VU43 2346 aa9.55□□□□□ -0.88
LINC00649-220ENST00000628906 ATP7BP35670 1465 aa9.54□□□□□ -0.88
LINC00649-220ENST00000628906 FMN2Q9NZ56 1722 aa9.54□□□□□ -0.88
LINC00649-220ENST00000628906 ANKRD50Q9ULJ7 1429 aa9.54□□□□□ -0.88
LINC00649-220ENST00000628906 USP19O94966 1318 aa9.54□□□□□ -0.88
LINC00649-220ENST00000628906 PARP4Q9UKK3 1724 aaKnown RBP9.53□□□□□ -0.88
LINC00649-220ENST00000628906 TNRC18O15417 2968 aaPredicted RBP9.53□□□□□ -0.88
LINC00649-220ENST00000628906 ZNF827Q17R98 1081 aa9.53□□□□□ -0.88
LINC00649-220ENST00000628906 NMRK2Q9NPI5 230 aa9.53□□□□□ -0.88
LINC00649-220ENST00000628906 ABHD8Q96I13 439 aa9.52□□□□□ -0.89
LINC00649-220ENST00000628906 TULP4Q9NRJ4 1543 aa9.51□□□□□ -0.89
LINC00649-220ENST00000628906 KIAA1210Q9ULL0 1709 aa9.51□□□□□ -0.89
LINC00649-220ENST00000628906 DDB1Q16531 1140 aa9.51□□□□□ -0.89
LINC00649-220ENST00000628906 MARCH10Q8NA82 808 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms