RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 ALS2Q96Q42 1657 aa27.7■■■□□ 2.02
SMN2-215ENST00000628696 HRCP23327 699 aa27.69■■■□□ 2.02
SMN2-215ENST00000628696 FAM98CQ17RN3 349 aaKnown RBP27.67■■■□□ 2.02
SMN2-215ENST00000628696 NRAPQ86VF7 1730 aa27.66■■■□□ 2.02
SMN2-215ENST00000628696 ARHGEF28Q8N1W1 1705 aaKnown RBP27.66■■■□□ 2.02
SMN2-215ENST00000628696 COL14A1Q05707 1796 aaKnown RBP27.65■■■□□ 2.02
SMN2-215ENST00000628696 NUDT16Q96DE0 195 aaKnown RBP27.65■■■□□ 2.02
SMN2-215ENST00000628696 SRCAPQ6ZRS2 3230 aa27.63■■■□□ 2.01
SMN2-215ENST00000628696 ITSN1Q15811 1721 aa27.62■■■□□ 2.01
SMN2-215ENST00000628696 CDK19Q9BWU1 502 aa27.61■■■□□ 2.01
SMN2-215ENST00000628696 PRDM11Q9NQV5 511 aa27.61■■■□□ 2.01
SMN2-215ENST00000628696 ATP7BP35670 1465 aa27.58■■■□□ 2.01
SMN2-215ENST00000628696 CRYBG1Q9Y4K1 1723 aa27.58■■■□□ 2.01
SMN2-215ENST00000628696 NUTM2GQ5VZR2 741 aa27.57■■■□□ 2
SMN2-215ENST00000628696 SPATA31A5Q5VU36 1347 aa27.56■■■□□ 2
SMN2-215ENST00000628696 SPATA31A7Q8IWB4 1347 aa27.56■■■□□ 2
SMN2-215ENST00000628696 BAG6P46379 1132 aa27.54■■■□□ 2
SMN2-215ENST00000628696 CHRNA2Q15822 529 aa27.54■■■□□ 2
SMN2-215ENST00000628696 FAM182BQ5T319 152 aa27.54■■■□□ 2
SMN2-215ENST00000628696 KIAA0232Q92628 1395 aa27.53■■■□□ 2
SMN2-215ENST00000628696 ACEP12821 1306 aa27.53■■■□□ 2
SMN2-215ENST00000628696 ZC3H6P61129 1189 aaKnown RBP27.53■■■□□ 2
SMN2-215ENST00000628696 STRN4Q9NRL3 753 aa27.52■■■□□ 2
SMN2-215ENST00000628696 CCDC61Q9Y6R9 512 aa27.52■■■□□ 2
SMN2-215ENST00000628696 NBPF1Q3BBV0 1214 aa27.51■■□□□ 1.99
SMN2-215ENST00000628696 NBPF8Q3BBV2 869 aa27.51■■□□□ 1.99
SMN2-215ENST00000628696 KIAA1210Q9ULL0 1709 aa27.5■■□□□ 1.99
SMN2-215ENST00000628696 PHRF1Q9P1Y6 1649 aaKnown RBP27.49■■□□□ 1.99
SMN2-215ENST00000628696 POLR3AO14802 1390 aaPredicted RBP27.48■■□□□ 1.99
SMN2-215ENST00000628696 PLEKHG3A1L390 1219 aa27.47■■□□□ 1.99
SMN2-215ENST00000628696 TOPAZ1Q8N9V7 1692 aa27.46■■□□□ 1.99
SMN2-215ENST00000628696 SPATA31A1Q5TZJ5 1347 aa27.46■■□□□ 1.99
SMN2-215ENST00000628696 PSDA5PKW4 1024 aaPredicted RBP27.46■■□□□ 1.99
SMN2-215ENST00000628696 EVA1CP58658 441 aa27.46■■□□□ 1.99
SMN2-215ENST00000628696 SRPK2P78362 688 aaKnown RBP27.46■■□□□ 1.99
SMN2-215ENST00000628696 EN1Q05925 392 aaPredicted RBP27.46■■□□□ 1.99
SMN2-215ENST00000628696 ABTB2Q8N961 1025 aa27.46■■□□□ 1.99
SMN2-215ENST00000628696 RGPD1P0DJD0 1748 aa27.45■■□□□ 1.99
SMN2-215ENST00000628696 USP35Q9P2H5 1018 aa27.45■■□□□ 1.98
SMN2-215ENST00000628696 THSD7AQ9UPZ6 1657 aa27.45■■□□□ 1.98
SMN2-215ENST00000628696 CABP2Q9NPB3 220 aa27.41■■□□□ 1.98
SMN2-215ENST00000628696 CENPJQ9HC77 1338 aaPredicted RBP27.41■■□□□ 1.98
SMN2-215ENST00000628696 PPIP5K1Q6PFW1 1433 aa27.39■■□□□ 1.97
SMN2-215ENST00000628696 TRIM37O94972 964 aa27.37■■□□□ 1.97
SMN2-215ENST00000628696 FAM196AQ6ZSG2 479 aa27.37■■□□□ 1.97
SMN2-215ENST00000628696 NLRP13Q86W25 1043 aa27.37■■□□□ 1.97
SMN2-215ENST00000628696 NRKQ7Z2Y5 1582 aa27.36■■□□□ 1.97
SMN2-215ENST00000628696 SSH2Q76I76 1423 aa27.36■■□□□ 1.97
SMN2-215ENST00000628696 LARP1Q6PKG0 1096 aaKnown RBP27.36■■□□□ 1.97
SMN2-215ENST00000628696 PDE3BQ13370 1112 aa27.35■■□□□ 1.97
SMN2-215ENST00000628696 TNS1Q9HBL0 1735 aaKnown RBP27.35■■□□□ 1.97
SMN2-215ENST00000628696 CAMTA1Q9Y6Y1 1673 aa27.34■■□□□ 1.97
SMN2-215ENST00000628696 EZH2Q15910 746 aaKnown RBP27.34■■□□□ 1.97
SMN2-215ENST00000628696 USP19O94966 1318 aa27.34■■□□□ 1.97
SMN2-215ENST00000628696 QRICH2Q9H0J4 1663 aa27.33■■□□□ 1.97
SMN2-215ENST00000628696 ZBTB7CA1YPR0 619 aa27.33■■□□□ 1.97
SMN2-215ENST00000628696 GCP02774 474 aa27.33■■□□□ 1.97
SMN2-215ENST00000628696 R3HDM1Q15032 1099 aaKnown RBP27.33■■□□□ 1.97
SMN2-215ENST00000628696 BARGINQ6ZT62 677 aa27.33■■□□□ 1.97
SMN2-215ENST00000628696 LRP5O75197 1615 aa27.33■■□□□ 1.97
SMN2-215ENST00000628696 CPDO75976 1380 aa27.33■■□□□ 1.97
SMN2-215ENST00000628696 TCP11L2Q8N4U5 519 aa27.32■■□□□ 1.96
SMN2-215ENST00000628696 L3MBTL2Q969R5 705 aa27.32■■□□□ 1.96
SMN2-215ENST00000628696 CABP1Q9NZU7 370 aa27.32■■□□□ 1.96
SMN2-215ENST00000628696 APBA3O96018 575 aa27.31■■□□□ 1.96
SMN2-215ENST00000628696 DISP2A7MBM2 1401 aa27.31■■□□□ 1.96
SMN2-215ENST00000628696 LMO7Q8WWI1 1683 aa27.29■■□□□ 1.96
SMN2-215ENST00000628696 NLRP6P59044 892 aa27.28■■□□□ 1.96
SMN2-215ENST00000628696 CAMKK2Q96RR4 588 aa27.28■■□□□ 1.96
SMN2-215ENST00000628696 SIN3AQ96ST3 1273 aa27.26■■□□□ 1.95
SMN2-215ENST00000628696 BRD4O60885 1362 aaPredicted RBP27.25■■□□□ 1.95
SMN2-215ENST00000628696 THRAP3Q9Y2W1 955 aaKnown RBP27.25■■□□□ 1.95
SMN2-215ENST00000628696 USP6P35125 1406 aa27.24■■□□□ 1.95
SMN2-215ENST00000628696 EVC2Q86UK5 1308 aa27.24■■□□□ 1.95
SMN2-215ENST00000628696 NEUROD1Q13562 356 aa27.24■■□□□ 1.95
SMN2-215ENST00000628696 COL5A2P05997 1499 aaPredicted RBP27.22■■□□□ 1.95
SMN2-215ENST00000628696 TRPM1Q7Z4N2 1603 aa27.19■■□□□ 1.94
SMN2-215ENST00000628696 PARD3Q8TEW0 1356 aa27.19■■□□□ 1.94
SMN2-215ENST00000628696 CRB1P82279 1406 aa27.18■■□□□ 1.94
SMN2-215ENST00000628696 ROCK2O75116 1388 aaKnown RBP27.18■■□□□ 1.94
SMN2-215ENST00000628696 AATKQ6ZMQ8 1374 aa27.17■■□□□ 1.94
SMN2-215ENST00000628696 SLIT3O75094 1523 aa27.16■■□□□ 1.94
SMN2-215ENST00000628696 PARP4Q9UKK3 1724 aaKnown RBP27.16■■□□□ 1.94
SMN2-215ENST00000628696 TOM1L2Q6ZVM7 507 aa27.16■■□□□ 1.94
SMN2-215ENST00000628696 PIK3C2AO00443 1686 aa27.15■■□□□ 1.94
SMN2-215ENST00000628696 ZNF692Q9BU19 519 aaPredicted RBP27.15■■□□□ 1.94
SMN2-215ENST00000628696 SOX12O15370 315 aa27.14■■□□□ 1.94
SMN2-215ENST00000628696 NBPF14Q5TI25 921 aa27.14■■□□□ 1.94
SMN2-215ENST00000628696 TTC21BQ7Z4L5 1316 aa27.14■■□□□ 1.93
SMN2-215ENST00000628696 RREB1Q92766 1687 aa27.13■■□□□ 1.93
SMN2-215ENST00000628696 NUP188Q5SRE5 1749 aa27.11■■□□□ 1.93
SMN2-215ENST00000628696 C11orf95C9JLR9 678 aaPredicted RBP27.11■■□□□ 1.93
SMN2-215ENST00000628696 DDB1Q16531 1140 aa27.11■■□□□ 1.93
SMN2-215ENST00000628696 AXIN2Q9Y2T1 843 aa27.11■■□□□ 1.93
SMN2-215ENST00000628696 COL18A1P39060 1754 aa27.11■■□□□ 1.93
SMN2-215ENST00000628696 AKAP12Q02952 1782 aa27.1■■□□□ 1.93
SMN2-215ENST00000628696 KCNH5Q8NCM2 988 aa27.09■■□□□ 1.93
SMN2-215ENST00000628696 RGPD5Q99666 1765 aa27.09■■□□□ 1.93
SMN2-215ENST00000628696 OVOS2A0A0G2JMS6 1433 aa27.08■■□□□ 1.93
SMN2-215ENST00000628696 OVOS2A0A0J9YW53 1432 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms