RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CERKQ8TCT0 537 aa16.39■□□□□ 0.21
SYNGAP1-207ENST00000628646 CABLES1Q8TDN4 633 aa16.39■□□□□ 0.21
SYNGAP1-207ENST00000628646 NLRP2Q9NX02 1062 aa16.38■□□□□ 0.21
SYNGAP1-207ENST00000628646 SLIT1O75093 1534 aa16.38■□□□□ 0.21
SYNGAP1-207ENST00000628646 FAM135BQ49AJ0 1406 aa16.38■□□□□ 0.21
SYNGAP1-207ENST00000628646 ARHGAP23Q9P227 1491 aa16.38■□□□□ 0.21
SYNGAP1-207ENST00000628646 MTHFSP49914 203 aa16.38■□□□□ 0.21
SYNGAP1-207ENST00000628646 TTC21BQ7Z4L5 1316 aa16.38■□□□□ 0.21
SYNGAP1-207ENST00000628646 MYO5BQ9ULV0 1848 aa16.37■□□□□ 0.21
SYNGAP1-207ENST00000628646 UBR1Q8IWV7 1749 aa16.37■□□□□ 0.21
SYNGAP1-207ENST00000628646 LRRC59Q96AG4 307 aaKnown RBP16.36■□□□□ 0.21
SYNGAP1-207ENST00000628646 PHF23Q9BUL5 403 aaPredicted RBP16.36■□□□□ 0.21
SYNGAP1-207ENST00000628646 NINLQ9Y2I6 1382 aa16.36■□□□□ 0.21
SYNGAP1-207ENST00000628646 ZRANB1Q9UGI0 708 aa16.36■□□□□ 0.21
SYNGAP1-207ENST00000628646 PUS7Q96PZ0 661 aaKnown RBP16.35■□□□□ 0.21
SYNGAP1-207ENST00000628646 PTPRUQ92729 1446 aa16.35■□□□□ 0.21
SYNGAP1-207ENST00000628646 RBM19Q9Y4C8 960 aaKnown RBP16.35■□□□□ 0.21
SYNGAP1-207ENST00000628646 KCNH5Q8NCM2 988 aa16.35■□□□□ 0.21
SYNGAP1-207ENST00000628646 FBLN1P23142 703 aa16.34■□□□□ 0.21
SYNGAP1-207ENST00000628646 ANKRD36BQ8N2N9 1353 aa16.34■□□□□ 0.21
SYNGAP1-207ENST00000628646 DIAPH1O60610 1272 aaKnown RBP16.34■□□□□ 0.21
SYNGAP1-207ENST00000628646 NGLY1Q96IV0 654 aa16.34■□□□□ 0.21
SYNGAP1-207ENST00000628646 PNNQ9H307 717 aaKnown RBP16.34■□□□□ 0.21
SYNGAP1-207ENST00000628646 PRR36Q9H6K5 1346 aa16.34■□□□□ 0.21
SYNGAP1-207ENST00000628646 NRXN1Q9ULB1 1477 aa16.33■□□□□ 0.21
SYNGAP1-207ENST00000628646 A0A1W2PP64 1363 aa16.33■□□□□ 0.2
SYNGAP1-207ENST00000628646 CHRNA2Q15822 529 aa16.33■□□□□ 0.2
SYNGAP1-207ENST00000628646 ADGRL3Q9HAR2 1447 aa16.33■□□□□ 0.2
SYNGAP1-207ENST00000628646 LAS1LQ9Y4W2 734 aaKnown RBP16.33■□□□□ 0.2
SYNGAP1-207ENST00000628646 PPP4R2Q9NY27 417 aa16.32■□□□□ 0.2
SYNGAP1-207ENST00000628646 PLEKHG3A1L390 1219 aa16.32■□□□□ 0.2
SYNGAP1-207ENST00000628646 FYB1O15117 783 aa16.32■□□□□ 0.2
SYNGAP1-207ENST00000628646 SBNO2Q9Y2G9 1366 aa16.32■□□□□ 0.2
SYNGAP1-207ENST00000628646 PPLO60437 1756 aa16.32■□□□□ 0.2
SYNGAP1-207ENST00000628646 CCDC146Q8IYE0 955 aa16.31■□□□□ 0.2
SYNGAP1-207ENST00000628646 INSRP06213 1382 aa16.31■□□□□ 0.2
SYNGAP1-207ENST00000628646 PPP2R1AP30153 589 aa16.31■□□□□ 0.2
SYNGAP1-207ENST00000628646 TOM1L2Q6ZVM7 507 aa16.31■□□□□ 0.2
SYNGAP1-207ENST00000628646 BRINP3Q76B58 766 aa16.31■□□□□ 0.2
SYNGAP1-207ENST00000628646 CARD14Q9BXL6 1004 aa16.31■□□□□ 0.2
SYNGAP1-207ENST00000628646 BLMP54132 1417 aaPredicted RBP16.31■□□□□ 0.2
SYNGAP1-207ENST00000628646 TTC21AQ8NDW8 1320 aa16.31■□□□□ 0.2
SYNGAP1-207ENST00000628646 HMOX1P09601 288 aa16.3■□□□□ 0.2
SYNGAP1-207ENST00000628646 EMILIN1Q9Y6C2 1016 aa16.29■□□□□ 0.2
SYNGAP1-207ENST00000628646 RTF1Q92541 710 aaKnown RBP16.28■□□□□ 0.2
SYNGAP1-207ENST00000628646 PTCH1Q13635 1447 aa16.28■□□□□ 0.2
SYNGAP1-207ENST00000628646 RAPGEF4Q8WZA2 1011 aa16.28■□□□□ 0.2
SYNGAP1-207ENST00000628646 C8orf37Q96NL8 207 aa16.28■□□□□ 0.2
SYNGAP1-207ENST00000628646 SETBP1Q9Y6X0 1596 aa16.26■□□□□ 0.19
SYNGAP1-207ENST00000628646 GCP02774 474 aa16.26■□□□□ 0.19
SYNGAP1-207ENST00000628646 KDM5AP29375 1690 aaKnown RBP16.25■□□□□ 0.19
SYNGAP1-207ENST00000628646 CANXP27824 592 aaKnown RBP16.24■□□□□ 0.19
SYNGAP1-207ENST00000628646 RRP7AQ9Y3A4 280 aaKnown RBP16.24■□□□□ 0.19
SYNGAP1-207ENST00000628646 DIP2AQ14689 1571 aa16.24■□□□□ 0.19
SYNGAP1-207ENST00000628646 AMER1Q5JTC6 1135 aaPredicted RBP16.23■□□□□ 0.19
SYNGAP1-207ENST00000628646 B4GALNT3Q6L9W6 998 aa16.23■□□□□ 0.19
SYNGAP1-207ENST00000628646 NPM2Q86SE8 214 aaKnown RBP16.23■□□□□ 0.19
SYNGAP1-207ENST00000628646 NKTRP30414 1462 aaKnown RBP16.22■□□□□ 0.19
SYNGAP1-207ENST00000628646 MED14O60244 1454 aa16.22■□□□□ 0.19
SYNGAP1-207ENST00000628646 ADGRB1O14514 1584 aa16.22■□□□□ 0.19
SYNGAP1-207ENST00000628646 SULT6B1Q6IMI4 303 aa16.22■□□□□ 0.19
SYNGAP1-207ENST00000628646 C1orf141Q5JVX7 400 aa16.21■□□□□ 0.19
SYNGAP1-207ENST00000628646 EDC4Q6P2E9 1401 aaKnown RBP16.21■□□□□ 0.19
SYNGAP1-207ENST00000628646 ARXQ96QS3 562 aa16.2■□□□□ 0.18
SYNGAP1-207ENST00000628646 TECPR2O15040 1411 aa16.2■□□□□ 0.18
SYNGAP1-207ENST00000628646 C1orf167Q5SNV9 1468 aa16.2■□□□□ 0.18
SYNGAP1-207ENST00000628646 USHBP1Q8N6Y0 703 aa16.2■□□□□ 0.18
SYNGAP1-207ENST00000628646 ARHGEF10O15013 1369 aa16.2■□□□□ 0.18
SYNGAP1-207ENST00000628646 HSP90AB2PQ58FF8 381 aa16.19■□□□□ 0.18
SYNGAP1-207ENST00000628646 ASXL1Q8IXJ9 1541 aa16.19■□□□□ 0.18
SYNGAP1-207ENST00000628646 NSD2O96028 1365 aa16.19■□□□□ 0.18
SYNGAP1-207ENST00000628646 SYTL4Q96C24 671 aaPredicted RBP16.19■□□□□ 0.18
SYNGAP1-207ENST00000628646 MSH5O43196 834 aa16.19■□□□□ 0.18
SYNGAP1-207ENST00000628646 DLC1Q96QB1 1528 aa16.19■□□□□ 0.18
SYNGAP1-207ENST00000628646 ANKARQ7Z5J8 1434 aa16.19■□□□□ 0.18
SYNGAP1-207ENST00000628646 NPC1L1Q9UHC9 1359 aa16.18■□□□□ 0.18
SYNGAP1-207ENST00000628646 TATP17735 454 aaPredicted RBP16.17■□□□□ 0.18
SYNGAP1-207ENST00000628646 PRKAR2BP31323 418 aa16.17■□□□□ 0.18
SYNGAP1-207ENST00000628646 ERICH6Q7L0X2 663 aa16.17■□□□□ 0.18
SYNGAP1-207ENST00000628646 QRICH2Q9H0J4 1663 aa16.17■□□□□ 0.18
SYNGAP1-207ENST00000628646 DDX54Q8TDD1 881 aaKnown RBP16.16■□□□□ 0.18
SYNGAP1-207ENST00000628646 ANKRD24Q8TF21 1146 aa16.16■□□□□ 0.18
SYNGAP1-207ENST00000628646 APAF1O14727 1248 aa16.16■□□□□ 0.18
SYNGAP1-207ENST00000628646 ADAMTS8Q9UP79 889 aa16.16■□□□□ 0.18
SYNGAP1-207ENST00000628646 BTG4Q9NY30 223 aa16.16■□□□□ 0.18
SYNGAP1-207ENST00000628646 HSPA1LP34931 641 aa16.15■□□□□ 0.18
SYNGAP1-207ENST00000628646 USP6P35125 1406 aa16.15■□□□□ 0.18
SYNGAP1-207ENST00000628646 MAP3K19Q56UN5 1328 aa16.15■□□□□ 0.18
SYNGAP1-207ENST00000628646 POLKQ9UBT6 870 aa16.15■□□□□ 0.18
SYNGAP1-207ENST00000628646 FANCIQ9NVI1 1328 aa16.15■□□□□ 0.18
SYNGAP1-207ENST00000628646 TULP4Q9NRJ4 1543 aa16.15■□□□□ 0.18
SYNGAP1-207ENST00000628646 CPS1P31327 1500 aa16.14■□□□□ 0.17
SYNGAP1-207ENST00000628646 CDCA7LQ96GN5 454 aa16.14■□□□□ 0.17
SYNGAP1-207ENST00000628646 LRRC7Q96NW7 1537 aa16.13■□□□□ 0.17
SYNGAP1-207ENST00000628646 ZNF142P52746 1687 aaPredicted RBP16.13■□□□□ 0.17
SYNGAP1-207ENST00000628646 TEFQ10587 303 aa16.13■□□□□ 0.17
SYNGAP1-207ENST00000628646 SPATA31A3Q5VYP0 1347 aa16.13■□□□□ 0.17
SYNGAP1-207ENST00000628646 PDE3BQ13370 1112 aa16.12■□□□□ 0.17
SYNGAP1-207ENST00000628646 ATP7BP35670 1465 aa16.12■□□□□ 0.17
SYNGAP1-207ENST00000628646 NCOA3Q9Y6Q9 1424 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms