RNA–Protein interactions for RNA: ENST00000623652.1

PPM1F-210, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 5

Gene PPM1F, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-210ENST00000623652 PRPF40AO75400 957 aaKnown RBP11.2□□□□□ -0.62
PPM1F-210ENST00000623652 NPM1P06748 294 aaKnown RBP eCLIP11.2□□□□□ -0.62
PPM1F-210ENST00000623652 ZNF445P59923 1031 aa11.2□□□□□ -0.62
PPM1F-210ENST00000623652 KIF2CQ99661 725 aa11.2□□□□□ -0.62
PPM1F-210ENST00000623652 TRIM27P14373 513 aa11.2□□□□□ -0.62
PPM1F-210ENST00000623652 HDAC1Q13547 482 aaPredicted RBP11.2□□□□□ -0.62
PPM1F-210ENST00000623652 PTPRGP23470 1445 aa11.19□□□□□ -0.62
PPM1F-210ENST00000623652 DMTNQ08495 405 aa11.19□□□□□ -0.62
PPM1F-210ENST00000623652 DDX19BQ9UMR2 479 aa11.19□□□□□ -0.62
PPM1F-210ENST00000623652 PLB1Q6P1J6 1458 aa11.19□□□□□ -0.62
PPM1F-210ENST00000623652 ZSCAN20P17040 1043 aaPredicted RBP11.19□□□□□ -0.62
PPM1F-210ENST00000623652 ITSN2Q9NZM3 1697 aa11.18□□□□□ -0.62
PPM1F-210ENST00000623652 AK9Q5TCS8 1911 aa11.18□□□□□ -0.62
PPM1F-210ENST00000623652 PDLIM2Q96JY6 352 aa11.18□□□□□ -0.62
PPM1F-210ENST00000623652 CARD14Q9BXL6 1004 aa11.18□□□□□ -0.62
PPM1F-210ENST00000623652 IBTKQ9P2D0 1353 aaPredicted RBP11.18□□□□□ -0.62
PPM1F-210ENST00000623652 PLA2R1Q13018 1463 aa11.18□□□□□ -0.62
PPM1F-210ENST00000623652 SYCE3A1L190 88 aa11.18□□□□□ -0.62
PPM1F-210ENST00000623652 PKP1Q13835 747 aa11.18□□□□□ -0.62
PPM1F-210ENST00000623652 ANKRD45Q5TZF3 282 aa11.18□□□□□ -0.62
PPM1F-210ENST00000623652 CROCC2H7BZ55 1655 aa11.18□□□□□ -0.62
PPM1F-210ENST00000623652 FAM177BA6PVY3 158 aa11.18□□□□□ -0.62
PPM1F-210ENST00000623652 IGSF3O75054 1194 aa11.18□□□□□ -0.62
PPM1F-210ENST00000623652 FOXD4L5Q5VV16 416 aaPredicted RBP11.18□□□□□ -0.62
PPM1F-210ENST00000623652 MORC1Q86VD1 984 aa11.18□□□□□ -0.62
PPM1F-210ENST00000623652 WDR63Q8IWG1 891 aa11.18□□□□□ -0.62
PPM1F-210ENST00000623652 FOXD4L4Q8WXT5 416 aaPredicted RBP11.18□□□□□ -0.62
PPM1F-210ENST00000623652 CCDC39Q9UFE4 941 aa11.18□□□□□ -0.62
PPM1F-210ENST00000623652 RAPGEF6Q8TEU7 1601 aa11.17□□□□□ -0.62
PPM1F-210ENST00000623652 NUP160Q12769 1436 aa11.17□□□□□ -0.62
PPM1F-210ENST00000623652 CHD1LQ86WJ1 897 aa11.17□□□□□ -0.62
PPM1F-210ENST00000623652 CHAMP1Q96JM3 812 aa11.17□□□□□ -0.62
PPM1F-210ENST00000623652 STAC3Q96MF2 364 aa11.17□□□□□ -0.62
PPM1F-210ENST00000623652 LMBRD1Q9NUN5 540 aa11.17□□□□□ -0.62
PPM1F-210ENST00000623652 TMEM57Q8N5G2 664 aa11.16□□□□□ -0.62
PPM1F-210ENST00000623652 KIF16BQ96L93 1317 aa11.16□□□□□ -0.62
PPM1F-210ENST00000623652 EXOSC9Q06265 439 aaKnown RBP11.16□□□□□ -0.62
PPM1F-210ENST00000623652 MAPK8IP2Q13387 824 aaPredicted RBP11.16□□□□□ -0.62
PPM1F-210ENST00000623652 TBC1D9Q6ZT07 1266 aa11.16□□□□□ -0.62
PPM1F-210ENST00000623652 KCNG1Q9UIX4 513 aa11.16□□□□□ -0.62
PPM1F-210ENST00000623652 NOB1Q9ULX3 412 aaKnown RBP11.16□□□□□ -0.62
PPM1F-210ENST00000623652 NUCB1Q02818 461 aa11.16□□□□□ -0.62
PPM1F-210ENST00000623652 UTP14CQ5TAP6 766 aaKnown RBP11.16□□□□□ -0.62
PPM1F-210ENST00000623652 ATF7IPQ6VMQ6 1270 aa11.16□□□□□ -0.62
PPM1F-210ENST00000623652 SSH1Q8WYL5 1049 aa11.16□□□□□ -0.62
PPM1F-210ENST00000623652 ADCY10Q96PN6 1610 aa11.15□□□□□ -0.62
PPM1F-210ENST00000623652 U2AF1L5P0DN76 240 aaPredicted RBP11.15□□□□□ -0.62
PPM1F-210ENST00000623652 MCM5P33992 734 aa11.15□□□□□ -0.62
PPM1F-210ENST00000623652 NUCB2P80303 420 aa11.15□□□□□ -0.62
PPM1F-210ENST00000623652 U2AF1Q01081 240 aaKnown RBP eCLIP11.15□□□□□ -0.62
PPM1F-210ENST00000623652 PLXNC1O60486 1568 aa11.15□□□□□ -0.62
PPM1F-210ENST00000623652 ABCC10Q5T3U5 1492 aa11.15□□□□□ -0.62
PPM1F-210ENST00000623652 KIAA2012Q0VF49 1180 aa11.15□□□□□ -0.62
PPM1F-210ENST00000623652 BMP2KLQ5H9B9 411 aa11.15□□□□□ -0.62
PPM1F-210ENST00000623652 SHROOM2Q13796 1616 aa11.15□□□□□ -0.62
PPM1F-210ENST00000623652 DISP1Q96F81 1524 aa11.15□□□□□ -0.63
PPM1F-210ENST00000623652 NPC1L1Q9UHC9 1359 aa11.15□□□□□ -0.63
PPM1F-210ENST00000623652 CCDC141Q6ZP82 1450 aa11.14□□□□□ -0.63
PPM1F-210ENST00000623652 SCAPERQ9BY12 1400 aa11.14□□□□□ -0.63
PPM1F-210ENST00000623652 PPP4R3BQ5MIZ7 849 aa11.14□□□□□ -0.63
PPM1F-210ENST00000623652 GPT2Q8TD30 523 aa11.14□□□□□ -0.63
PPM1F-210ENST00000623652 SPDYE4A6NLX3 237 aa11.14□□□□□ -0.63
PPM1F-210ENST00000623652 CLEC17AQ6ZS10 378 aa11.14□□□□□ -0.63
PPM1F-210ENST00000623652 ZNF830Q96NB3 372 aaPredicted RBP11.14□□□□□ -0.63
PPM1F-210ENST00000623652 MTHFSP49914 203 aa11.13□□□□□ -0.63
PPM1F-210ENST00000623652 TMEM63CQ9P1W3 806 aa11.13□□□□□ -0.63
PPM1F-210ENST00000623652 SHANK2Q9UPX8 1470 aa11.13□□□□□ -0.63
PPM1F-210ENST00000623652 LRSAM1Q6UWE0 723 aa11.13□□□□□ -0.63
PPM1F-210ENST00000623652 C1orf115Q9H7X2 142 aa11.13□□□□□ -0.63
PPM1F-210ENST00000623652 ZBTB40Q9NUA8 1239 aa11.13□□□□□ -0.63
PPM1F-210ENST00000623652 KIAA0556O60303 1618 aa11.13□□□□□ -0.63
PPM1F-210ENST00000623652 EIF2AK4Q9P2K8 1649 aaKnown RBP11.13□□□□□ -0.63
PPM1F-210ENST00000623652 MYRIPQ8NFW9 859 aa11.12□□□□□ -0.63
PPM1F-210ENST00000623652 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.12□□□□□ -0.63
PPM1F-210ENST00000623652 POLR3AO14802 1390 aaPredicted RBP11.12□□□□□ -0.63
PPM1F-210ENST00000623652 SYNMO15061 1565 aa11.12□□□□□ -0.63
PPM1F-210ENST00000623652 TMED8Q6PL24 325 aaPredicted RBP11.12□□□□□ -0.63
PPM1F-210ENST00000623652 ZGPATQ8N5A5 531 aaKnown RBP11.12□□□□□ -0.63
PPM1F-210ENST00000623652 NSFL1CQ9UNZ2 370 aaKnown RBP11.12□□□□□ -0.63
PPM1F-210ENST00000623652 LAMC1P11047 1609 aa11.12□□□□□ -0.63
PPM1F-210ENST00000623652 ATP2B3Q16720 1220 aa11.11□□□□□ -0.63
PPM1F-210ENST00000623652 C17orf53Q8N3J3 647 aaPredicted RBP11.11□□□□□ -0.63
PPM1F-210ENST00000623652 PATL2C9JE40 543 aaKnown RBP11.11□□□□□ -0.63
PPM1F-210ENST00000623652 ZNF710Q8N1W2 664 aa11.11□□□□□ -0.63
PPM1F-210ENST00000623652 CFAP53Q96M91 514 aa11.11□□□□□ -0.63
PPM1F-210ENST00000623652 HSP90B1P14625 803 aaKnown RBP11.1□□□□□ -0.63
PPM1F-210ENST00000623652 FOXD4L6Q3SYB3 417 aaPredicted RBP11.1□□□□□ -0.63
PPM1F-210ENST00000623652 FOXD4L3Q6VB84 417 aaPredicted RBP11.1□□□□□ -0.63
PPM1F-210ENST00000623652 GTPBP4Q9BZE4 634 aaKnown RBP11.1□□□□□ -0.63
PPM1F-210ENST00000623652 BCCIPQ9P287 314 aaKnown RBP eCLIP11.1□□□□□ -0.63
PPM1F-210ENST00000623652 CDC42BPAQ5VT25 1732 aa11.1□□□□□ -0.63
PPM1F-210ENST00000623652 SCAF11Q99590 1463 aaKnown RBP11.1□□□□□ -0.63
PPM1F-210ENST00000623652 KIF3AQ9Y496 699 aa11.1□□□□□ -0.63
PPM1F-210ENST00000623652 U2SURPO15042 1029 aaKnown RBP11.09□□□□□ -0.63
PPM1F-210ENST00000623652 KIF20AO95235 890 aa11.09□□□□□ -0.63
PPM1F-210ENST00000623652 CHGAP10645 457 aaKnown RBP11.09□□□□□ -0.63
PPM1F-210ENST00000623652 RABEP1Q15276 862 aa11.09□□□□□ -0.63
PPM1F-210ENST00000623652 HMGN5P82970 282 aaKnown RBP11.09□□□□□ -0.63
PPM1F-210ENST00000623652 IPO8O15397 1037 aaKnown RBP11.08□□□□□ -0.64
PPM1F-210ENST00000623652 CDC45O75419 566 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms