RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-219ENST00000622171 NUDT16Q96DE0 195 aaKnown RBP6.43□□□□□ -1.38
LINC00649-219ENST00000622171 PCGF6Q9BYE7 350 aa6.43□□□□□ -1.38
LINC00649-219ENST00000622171 COL14A1Q05707 1796 aaKnown RBP6.43□□□□□ -1.38
LINC00649-219ENST00000622171 CENPJQ9HC77 1338 aaPredicted RBP6.43□□□□□ -1.38
LINC00649-219ENST00000622171 ACIN1Q9UKV3 1341 aaKnown RBP6.43□□□□□ -1.38
LINC00649-219ENST00000622171 TONSLQ96HA7 1378 aa6.43□□□□□ -1.38
LINC00649-219ENST00000622171 PPIP5K1Q6PFW1 1433 aa6.42□□□□□ -1.38
LINC00649-219ENST00000622171 RALGAPBQ86X10 1494 aa6.42□□□□□ -1.38
LINC00649-219ENST00000622171 KAT6BQ8WYB5 2073 aa6.42□□□□□ -1.38
LINC00649-219ENST00000622171 HRCP23327 699 aa6.42□□□□□ -1.38
LINC00649-219ENST00000622171 FAM182BQ5T319 152 aa6.42□□□□□ -1.38
LINC00649-219ENST00000622171 GPRASP1Q5JY77 1395 aa6.42□□□□□ -1.38
LINC00649-219ENST00000622171 MON2Q7Z3U7 1717 aa6.42□□□□□ -1.38
LINC00649-219ENST00000622171 LTN1O94822 1766 aa6.41□□□□□ -1.38
LINC00649-219ENST00000622171 SLIT2O94813 1529 aa6.41□□□□□ -1.38
LINC00649-219ENST00000622171 ZC3H6P61129 1189 aaKnown RBP6.41□□□□□ -1.38
LINC00649-219ENST00000622171 TRIM26Q12899 539 aaPredicted RBP6.41□□□□□ -1.38
LINC00649-219ENST00000622171 ACEP12821 1306 aa6.41□□□□□ -1.38
LINC00649-219ENST00000622171 WNK3Q9BYP7 1800 aa6.41□□□□□ -1.38
LINC00649-219ENST00000622171 SRCAPQ6ZRS2 3230 aa6.4□□□□□ -1.38
LINC00649-219ENST00000622171 RBM6P78332 1123 aaKnown RBP6.4□□□□□ -1.38
LINC00649-219ENST00000622171 UPF1Q92900 1129 aaKnown RBP eCLIP6.4□□□□□ -1.38
LINC00649-219ENST00000622171 STRN4Q9NRL3 753 aa6.4□□□□□ -1.38
LINC00649-219ENST00000622171 USP35Q9P2H5 1018 aa6.4□□□□□ -1.38
LINC00649-219ENST00000622171 TRPC5Q9UL62 973 aaPredicted RBP6.4□□□□□ -1.38
LINC00649-219ENST00000622171 SBNO1A3KN83 1393 aa6.4□□□□□ -1.39
LINC00649-219ENST00000622171 ARHGEF10O15013 1369 aa6.4□□□□□ -1.39
LINC00649-219ENST00000622171 KIAA0232Q92628 1395 aa6.4□□□□□ -1.39
LINC00649-219ENST00000622171 RGPD2P0DJD1 1756 aa6.39□□□□□ -1.39
LINC00649-219ENST00000622171 FAM83GA6ND36 823 aa6.39□□□□□ -1.39
LINC00649-219ENST00000622171 FAM98CQ17RN3 349 aaKnown RBP6.39□□□□□ -1.39
LINC00649-219ENST00000622171 SIRT1Q96EB6 747 aa6.39□□□□□ -1.39
LINC00649-219ENST00000622171 BTG4Q9NY30 223 aa6.39□□□□□ -1.39
LINC00649-219ENST00000622171 ZRANB1Q9UGI0 708 aa6.39□□□□□ -1.39
LINC00649-219ENST00000622171 EIF3AQ14152 1382 aaKnown RBP6.39□□□□□ -1.39
LINC00649-219ENST00000622171 UNC5CLQ8IV45 518 aa6.38□□□□□ -1.39
LINC00649-219ENST00000622171 FNBP4Q8N3X1 1017 aaPredicted RBP6.38□□□□□ -1.39
LINC00649-219ENST00000622171 CARD11Q9BXL7 1154 aa6.38□□□□□ -1.39
LINC00649-219ENST00000622171 PRDM11Q9NQV5 511 aa6.38□□□□□ -1.39
LINC00649-219ENST00000622171 CABP1Q9NZU7 370 aa6.38□□□□□ -1.39
LINC00649-219ENST00000622171 CDK12Q9NYV4 1490 aaPredicted RBP6.38□□□□□ -1.39
LINC00649-219ENST00000622171 LMO7Q8WWI1 1683 aa6.38□□□□□ -1.39
LINC00649-219ENST00000622171 TNS1Q9HBL0 1735 aaKnown RBP6.38□□□□□ -1.39
LINC00649-219ENST00000622171 KIF20BQ96Q89 1820 aa6.37□□□□□ -1.39
LINC00649-219ENST00000622171 MYOM1P52179 1685 aa6.37□□□□□ -1.39
LINC00649-219ENST00000622171 THSD7AQ9UPZ6 1657 aa6.37□□□□□ -1.39
LINC00649-219ENST00000622171 CAMTA1Q9Y6Y1 1673 aa6.37□□□□□ -1.39
LINC00649-219ENST00000622171 USP6P35125 1406 aa6.37□□□□□ -1.39
LINC00649-219ENST00000622171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.37□□□□□ -1.39
LINC00649-219ENST00000622171 ABTB2Q8N961 1025 aa6.37□□□□□ -1.39
LINC00649-219ENST00000622171 TMC1Q8TDI8 760 aa6.37□□□□□ -1.39
LINC00649-219ENST00000622171 GJD4Q96KN9 370 aaPredicted RBP6.37□□□□□ -1.39
LINC00649-219ENST00000622171 COL18A1P39060 1754 aa6.36□□□□□ -1.39
LINC00649-219ENST00000622171 POLR3AO14802 1390 aaPredicted RBP6.36□□□□□ -1.39
LINC00649-219ENST00000622171 ATAD2Q6PL18 1390 aa6.36□□□□□ -1.39
LINC00649-219ENST00000622171 DEFB132Q7Z7B7 95 aa6.36□□□□□ -1.39
LINC00649-219ENST00000622171 SEPT12Q8IYM1 358 aa6.36□□□□□ -1.39
LINC00649-219ENST00000622171 CCDC61Q9Y6R9 512 aa6.36□□□□□ -1.39
LINC00649-219ENST00000622171 RGPD1P0DJD0 1748 aa6.36□□□□□ -1.39
LINC00649-219ENST00000622171 LRRC37A3O60309 1634 aa6.36□□□□□ -1.39
LINC00649-219ENST00000622171 EVC2Q86UK5 1308 aa6.35□□□□□ -1.39
LINC00649-219ENST00000622171 SBF2Q86WG5 1849 aa6.35□□□□□ -1.39
LINC00649-219ENST00000622171 POLR3GLQ9BT43 218 aa6.35□□□□□ -1.39
LINC00649-219ENST00000622171 SLIT3O75094 1523 aa6.35□□□□□ -1.39
LINC00649-219ENST00000622171 CD163L1Q9NR16 1453 aa6.34□□□□□ -1.39
LINC00649-219ENST00000622171 SSH2Q76I76 1423 aa6.34□□□□□ -1.39
LINC00649-219ENST00000622171 KTN1Q86UP2 1357 aaKnown RBP6.34□□□□□ -1.39
LINC00649-219ENST00000622171 NLRP6P59044 892 aa6.34□□□□□ -1.39
LINC00649-219ENST00000622171 VPS72Q15906 364 aa6.34□□□□□ -1.39
LINC00649-219ENST00000622171 LARP1Q6PKG0 1096 aaKnown RBP6.34□□□□□ -1.39
LINC00649-219ENST00000622171 NME9Q86XW9 330 aa6.34□□□□□ -1.39
LINC00649-219ENST00000622171 NFAT5O94916 1531 aa6.34□□□□□ -1.39
LINC00649-219ENST00000622171 COL5A2P05997 1499 aaPredicted RBP6.34□□□□□ -1.4
LINC00649-219ENST00000622171 A0A1W2PP64 1363 aa6.33□□□□□ -1.4
LINC00649-219ENST00000622171 USP47Q96K76 1375 aa6.33□□□□□ -1.4
LINC00649-219ENST00000622171 USP19O94966 1318 aa6.33□□□□□ -1.4
LINC00649-219ENST00000622171 TTC21BQ7Z4L5 1316 aa6.33□□□□□ -1.4
LINC00649-219ENST00000622171 ST20-MTHFSA0A0A6YYL1 179 aa6.33□□□□□ -1.4
LINC00649-219ENST00000622171 PLEKHG3A1L390 1219 aa6.33□□□□□ -1.4
LINC00649-219ENST00000622171 FBLN1P23142 703 aa6.33□□□□□ -1.4
LINC00649-219ENST00000622171 STAC3Q96MF2 364 aa6.33□□□□□ -1.4
LINC00649-219ENST00000622171 SLC12A5Q9H2X9 1139 aa6.33□□□□□ -1.4
LINC00649-219ENST00000622171 PARP4Q9UKK3 1724 aaKnown RBP6.33□□□□□ -1.4
LINC00649-219ENST00000622171 SPATA31A5Q5VU36 1347 aa6.32□□□□□ -1.4
LINC00649-219ENST00000622171 SPATA31A7Q8IWB4 1347 aa6.32□□□□□ -1.4
LINC00649-219ENST00000622171 PSDA5PKW4 1024 aaPredicted RBP6.32□□□□□ -1.4
LINC00649-219ENST00000622171 EVA1CP58658 441 aa6.32□□□□□ -1.4
LINC00649-219ENST00000622171 KRT27Q7Z3Y8 459 aa6.32□□□□□ -1.4
LINC00649-219ENST00000622171 CCER1Q8TC90 406 aaPredicted RBP6.32□□□□□ -1.4
LINC00649-219ENST00000622171 NUP188Q5SRE5 1749 aa6.32□□□□□ -1.4
LINC00649-219ENST00000622171 USP54Q70EL1 1684 aa6.32□□□□□ -1.4
LINC00649-219ENST00000622171 CPSF1Q10570 1443 aaKnown RBP6.32□□□□□ -1.4
LINC00649-219ENST00000622171 SPATA31A1Q5TZJ5 1347 aa6.31□□□□□ -1.4
LINC00649-219ENST00000622171 GCP02774 474 aa6.31□□□□□ -1.4
LINC00649-219ENST00000622171 LTV1Q96GA3 475 aaPredicted RBP6.31□□□□□ -1.4
LINC00649-219ENST00000622171 AXIN2Q9Y2T1 843 aa6.31□□□□□ -1.4
LINC00649-219ENST00000622171 SBNO2Q9Y2G9 1366 aa6.31□□□□□ -1.4
LINC00649-219ENST00000622171 PEAK1Q9H792 1746 aa6.3□□□□□ -1.4
LINC00649-219ENST00000622171 TRIM37O94972 964 aa6.3□□□□□ -1.4
LINC00649-219ENST00000622171 CSB-PGBD3P0DP91 1061 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms