RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 NRXN1Q9ULB1 1477 aa9.36□□□□□ -0.91
TRIM49B-202ENST00000622138 KIF1BO60333 1816 aa9.36□□□□□ -0.91
TRIM49B-202ENST00000622138 TBC1D2Q9BYX2 928 aa9.36□□□□□ -0.91
TRIM49B-202ENST00000622138 NOL7Q9UMY1 257 aaKnown RBP9.36□□□□□ -0.91
TRIM49B-202ENST00000622138 ZC3H13Q5T200 1668 aaKnown RBP9.35□□□□□ -0.91
TRIM49B-202ENST00000622138 NCOA3Q9Y6Q9 1424 aa9.35□□□□□ -0.91
TRIM49B-202ENST00000622138 TBC1D32Q96NH3 1257 aa9.35□□□□□ -0.91
TRIM49B-202ENST00000622138 KIDINS220Q9ULH0 1771 aa9.35□□□□□ -0.91
TRIM49B-202ENST00000622138 NOS1P29475 1434 aa9.35□□□□□ -0.91
TRIM49B-202ENST00000622138 ADGRB3O60242 1522 aa9.35□□□□□ -0.91
TRIM49B-202ENST00000622138 NASPP49321 788 aaPredicted RBP9.34□□□□□ -0.91
TRIM49B-202ENST00000622138 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.34□□□□□ -0.91
TRIM49B-202ENST00000622138 VGLL3A8MV65 326 aa9.34□□□□□ -0.91
TRIM49B-202ENST00000622138 IGHDP01880 384 aa9.34□□□□□ -0.91
TRIM49B-202ENST00000622138 IRX3P78415 501 aaPredicted RBP9.34□□□□□ -0.91
TRIM49B-202ENST00000622138 NSD3Q9BZ95 1437 aa9.34□□□□□ -0.91
TRIM49B-202ENST00000622138 IQSEC2Q5JU85 1478 aa9.33□□□□□ -0.92
TRIM49B-202ENST00000622138 E9PSI1 815 aa9.33□□□□□ -0.92
TRIM49B-202ENST00000622138 DNTTIP2Q5QJE6 756 aaKnown RBP9.33□□□□□ -0.92
TRIM49B-202ENST00000622138 QRICH2Q9H0J4 1663 aa9.33□□□□□ -0.92
TRIM49B-202ENST00000622138 GAS2L3Q86XJ1 694 aa9.33□□□□□ -0.92
TRIM49B-202ENST00000622138 PLCD3Q8N3E9 789 aa9.33□□□□□ -0.92
TRIM49B-202ENST00000622138 POLR3AO14802 1390 aaPredicted RBP9.32□□□□□ -0.92
TRIM49B-202ENST00000622138 PANK1Q8TE04 598 aa9.32□□□□□ -0.92
TRIM49B-202ENST00000622138 DNAJC2Q99543 621 aaKnown RBP9.32□□□□□ -0.92
TRIM49B-202ENST00000622138 RRP7AQ9Y3A4 280 aaKnown RBP9.32□□□□□ -0.92
TRIM49B-202ENST00000622138 ADGRB1O14514 1584 aa9.32□□□□□ -0.92
TRIM49B-202ENST00000622138 LMTK2Q8IWU2 1503 aa9.32□□□□□ -0.92
TRIM49B-202ENST00000622138 SBNO2Q9Y2G9 1366 aa9.32□□□□□ -0.92
TRIM49B-202ENST00000622138 NINLQ9Y2I6 1382 aa9.32□□□□□ -0.92
TRIM49B-202ENST00000622138 WWC1Q8IX03 1113 aa9.31□□□□□ -0.92
TRIM49B-202ENST00000622138 MYRIPQ8NFW9 859 aa9.31□□□□□ -0.92
TRIM49B-202ENST00000622138 GBP4Q96PP9 640 aa9.31□□□□□ -0.92
TRIM49B-202ENST00000622138 TNNQ9UQP3 1299 aa9.31□□□□□ -0.92
TRIM49B-202ENST00000622138 ZKSCAN5Q9Y2L8 839 aa9.31□□□□□ -0.92
TRIM49B-202ENST00000622138 PPLO60437 1756 aa9.31□□□□□ -0.92
TRIM49B-202ENST00000622138 FRMPD1Q5SYB0 1578 aa9.31□□□□□ -0.92
TRIM49B-202ENST00000622138 SETBP1Q9Y6X0 1596 aa9.31□□□□□ -0.92
TRIM49B-202ENST00000622138 ARHGAP31Q2M1Z3 1444 aa9.31□□□□□ -0.92
TRIM49B-202ENST00000622138 PDLIM2Q96JY6 352 aa9.31□□□□□ -0.92
TRIM49B-202ENST00000622138 ARID3AQ99856 593 aa9.31□□□□□ -0.92
TRIM49B-202ENST00000622138 CIZ1Q9ULV3 898 aaPredicted RBP9.31□□□□□ -0.92
TRIM49B-202ENST00000622138 GTF2F1P35269 517 aaKnown RBP eCLIP9.3□□□□□ -0.92
TRIM49B-202ENST00000622138 RBM25P49756 843 aaKnown RBP9.3□□□□□ -0.92
TRIM49B-202ENST00000622138 RGS22Q8NE09 1264 aa9.3□□□□□ -0.92
TRIM49B-202ENST00000622138 SLC12A5Q9H2X9 1139 aa9.3□□□□□ -0.92
TRIM49B-202ENST00000622138 TRAK1Q9UPV9 953 aa9.3□□□□□ -0.92
TRIM49B-202ENST00000622138 COG6Q9Y2V7 657 aa9.3□□□□□ -0.92
TRIM49B-202ENST00000622138 NPATQ14207 1427 aa9.3□□□□□ -0.92
TRIM49B-202ENST00000622138 ASXL2Q76L83 1435 aa9.3□□□□□ -0.92
TRIM49B-202ENST00000622138 CFAP65Q6ZU64 1925 aaKnown RBP9.3□□□□□ -0.92
TRIM49B-202ENST00000622138 SECISBP2LQ93073 1101 aaKnown RBP9.3□□□□□ -0.92
TRIM49B-202ENST00000622138 PRIMPOLQ96LW4 560 aa9.3□□□□□ -0.92
TRIM49B-202ENST00000622138 HSP90AB1P08238 724 aaKnown RBP9.29□□□□□ -0.92
TRIM49B-202ENST00000622138 CHGAP10645 457 aaKnown RBP9.29□□□□□ -0.92
TRIM49B-202ENST00000622138 NEUROD2Q15784 382 aa9.29□□□□□ -0.92
TRIM49B-202ENST00000622138 ZNF692Q9BU19 519 aaPredicted RBP9.29□□□□□ -0.92
TRIM49B-202ENST00000622138 CGNQ9P2M7 1197 aaKnown RBP9.29□□□□□ -0.92
TRIM49B-202ENST00000622138 ZNF518AQ6AHZ1 1483 aa9.29□□□□□ -0.92
TRIM49B-202ENST00000622138 USP32Q8NFA0 1604 aa9.29□□□□□ -0.92
TRIM49B-202ENST00000622138 SEC24BO95487 1268 aa9.29□□□□□ -0.92
TRIM49B-202ENST00000622138 RLBP1P12271 317 aa9.29□□□□□ -0.92
TRIM49B-202ENST00000622138 HMGN5P82970 282 aaKnown RBP9.29□□□□□ -0.92
TRIM49B-202ENST00000622138 XPCQ01831 940 aaPredicted RBP9.29□□□□□ -0.92
TRIM49B-202ENST00000622138 TMEM132EQ6IEE7 984 aa9.29□□□□□ -0.92
TRIM49B-202ENST00000622138 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.29□□□□□ -0.92
TRIM49B-202ENST00000622138 CBX1P83916 185 aa9.28□□□□□ -0.92
TRIM49B-202ENST00000622138 MORC1Q86VD1 984 aa9.28□□□□□ -0.92
TRIM49B-202ENST00000622138 CLUAP1Q96AJ1 413 aa9.28□□□□□ -0.92
TRIM49B-202ENST00000622138 RNF216Q9NWF9 866 aaPredicted RBP9.28□□□□□ -0.92
TRIM49B-202ENST00000622138 CGNL1Q0VF96 1302 aa9.28□□□□□ -0.92
TRIM49B-202ENST00000622138 TULP4Q9NRJ4 1543 aa9.28□□□□□ -0.92
TRIM49B-202ENST00000622138 CCDC66A2RUB6 948 aa9.27□□□□□ -0.92
TRIM49B-202ENST00000622138 DDIT3P35638 169 aa9.27□□□□□ -0.92
TRIM49B-202ENST00000622138 IRX5P78411 483 aaPredicted RBP9.27□□□□□ -0.92
TRIM49B-202ENST00000622138 GABPB1Q06547 395 aaPredicted RBP9.27□□□□□ -0.92
TRIM49B-202ENST00000622138 PDE3AQ14432 1141 aa9.27□□□□□ -0.92
TRIM49B-202ENST00000622138 TSPYL1Q9H0U9 437 aa9.27□□□□□ -0.92
TRIM49B-202ENST00000622138 HECW2Q9P2P5 1572 aa9.27□□□□□ -0.93
TRIM49B-202ENST00000622138 RARSP54136 660 aaKnown RBP9.27□□□□□ -0.93
TRIM49B-202ENST00000622138 TCP11L2Q8N4U5 519 aa9.27□□□□□ -0.93
TRIM49B-202ENST00000622138 BCL2L13Q9BXK5 485 aa9.27□□□□□ -0.93
TRIM49B-202ENST00000622138 SIGLEC1Q9BZZ2 1709 aa9.27□□□□□ -0.93
TRIM49B-202ENST00000622138 C14orf93Q9H972 538 aaKnown RBP9.27□□□□□ -0.93
TRIM49B-202ENST00000622138 CCDC39Q9UFE4 941 aa9.27□□□□□ -0.93
TRIM49B-202ENST00000622138 GLI2P10070 1586 aa9.26□□□□□ -0.93
TRIM49B-202ENST00000622138 ZNF445P59923 1031 aa9.26□□□□□ -0.93
TRIM49B-202ENST00000622138 BCCIPQ9P287 314 aaKnown RBP eCLIP9.26□□□□□ -0.93
TRIM49B-202ENST00000622138 ARHGEF28Q8N1W1 1705 aaKnown RBP9.26□□□□□ -0.93
TRIM49B-202ENST00000622138 NUTM2DQ5VT03 806 aaPredicted RBP9.26□□□□□ -0.93
TRIM49B-202ENST00000622138 HSCBQ8IWL3 235 aa9.26□□□□□ -0.93
TRIM49B-202ENST00000622138 ZNF710Q8N1W2 664 aa9.26□□□□□ -0.93
TRIM49B-202ENST00000622138 RUNDC1Q96C34 613 aa9.26□□□□□ -0.93
TRIM49B-202ENST00000622138 YY1AP1Q9H869 796 aa9.26□□□□□ -0.93
TRIM49B-202ENST00000622138 PCDHB15Q9Y5E8 787 aa9.26□□□□□ -0.93
TRIM49B-202ENST00000622138 ABCC3O15438 1527 aa9.25□□□□□ -0.93
TRIM49B-202ENST00000622138 MTHFSP49914 203 aa9.25□□□□□ -0.93
TRIM49B-202ENST00000622138 MMP14P50281 582 aa9.25□□□□□ -0.93
TRIM49B-202ENST00000622138 ATP2B3Q16720 1220 aa9.25□□□□□ -0.93
TRIM49B-202ENST00000622138 NGEFQ8N5V2 710 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms