RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 TNS1Q9HBL0 1735 aaKnown RBP23.1■■□□□ 1.29
SNHG28-203ENST00000621242 CRYBG1Q9Y4K1 1723 aa23.1■■□□□ 1.29
SNHG28-203ENST00000621242 R3HDM1Q15032 1099 aaKnown RBP23.09■■□□□ 1.29
SNHG28-203ENST00000621242 PRR36Q9H6K5 1346 aa23.08■■□□□ 1.29
SNHG28-203ENST00000621242 ACIN1Q9UKV3 1341 aaKnown RBP23.08■■□□□ 1.29
SNHG28-203ENST00000621242 TRAK1Q9UPV9 953 aa23.08■■□□□ 1.29
SNHG28-203ENST00000621242 THSD7AQ9UPZ6 1657 aa23.08■■□□□ 1.29
SNHG28-203ENST00000621242 MINK1Q8N4C8 1332 aaPredicted RBP23.07■■□□□ 1.28
SNHG28-203ENST00000621242 ADGRB1O14514 1584 aa23.06■■□□□ 1.28
SNHG28-203ENST00000621242 TULP4Q9NRJ4 1543 aa23.04■■□□□ 1.28
SNHG28-203ENST00000621242 PAK3O75914 559 aaPredicted RBP23.04■■□□□ 1.28
SNHG28-203ENST00000621242 EZH2Q15910 746 aaKnown RBP23.04■■□□□ 1.28
SNHG28-203ENST00000621242 PRDM11Q9NQV5 511 aa23.04■■□□□ 1.28
SNHG28-203ENST00000621242 DISP2A7MBM2 1401 aa23.04■■□□□ 1.28
SNHG28-203ENST00000621242 EIF3AQ14152 1382 aaKnown RBP23.03■■□□□ 1.28
SNHG28-203ENST00000621242 NGDNQ8NEJ9 315 aaKnown RBP23.03■■□□□ 1.28
SNHG28-203ENST00000621242 WASLO00401 505 aaPredicted RBP23.02■■□□□ 1.28
SNHG28-203ENST00000621242 SPATA31A1Q5TZJ5 1347 aa23■■□□□ 1.27
SNHG28-203ENST00000621242 TRIM37O94972 964 aa22.99■■□□□ 1.27
SNHG28-203ENST00000621242 CAMKK2Q96RR4 588 aa22.99■■□□□ 1.27
SNHG28-203ENST00000621242 KIAA0232Q92628 1395 aa22.99■■□□□ 1.27
SNHG28-203ENST00000621242 CHRNA2Q15822 529 aa22.98■■□□□ 1.27
SNHG28-203ENST00000621242 STRN4Q9NRL3 753 aa22.98■■□□□ 1.27
SNHG28-203ENST00000621242 ITSN1Q15811 1721 aa22.98■■□□□ 1.27
SNHG28-203ENST00000621242 PHRF1Q9P1Y6 1649 aaKnown RBP22.97■■□□□ 1.27
SNHG28-203ENST00000621242 FAM196AQ6ZSG2 479 aa22.97■■□□□ 1.27
SNHG28-203ENST00000621242 KDM2AQ9Y2K7 1162 aa22.97■■□□□ 1.27
SNHG28-203ENST00000621242 APBA3O96018 575 aa22.95■■□□□ 1.26
SNHG28-203ENST00000621242 ZC3H6P61129 1189 aaKnown RBP22.94■■□□□ 1.26
SNHG28-203ENST00000621242 DCAF11Q8TEB1 546 aa22.93■■□□□ 1.26
SNHG28-203ENST00000621242 NUDT16Q96DE0 195 aaKnown RBP22.93■■□□□ 1.26
SNHG28-203ENST00000621242 USP35Q9P2H5 1018 aa22.93■■□□□ 1.26
SNHG28-203ENST00000621242 ARHGEF28Q8N1W1 1705 aaKnown RBP22.93■■□□□ 1.26
SNHG28-203ENST00000621242 ATP7BP35670 1465 aa22.92■■□□□ 1.26
SNHG28-203ENST00000621242 NUTM2GQ5VZR2 741 aa22.92■■□□□ 1.26
SNHG28-203ENST00000621242 RREB1Q92766 1687 aa22.92■■□□□ 1.26
SNHG28-203ENST00000621242 PARD3Q8TEW0 1356 aa22.9■■□□□ 1.26
SNHG28-203ENST00000621242 NUP188Q5SRE5 1749 aa22.9■■□□□ 1.26
SNHG28-203ENST00000621242 EVA1CP58658 441 aa22.89■■□□□ 1.25
SNHG28-203ENST00000621242 PDE3BQ13370 1112 aa22.88■■□□□ 1.25
SNHG28-203ENST00000621242 BARGINQ6ZT62 677 aa22.87■■□□□ 1.25
SNHG28-203ENST00000621242 SSH2Q76I76 1423 aa22.87■■□□□ 1.25
SNHG28-203ENST00000621242 RAB3GAP2Q9H2M9 1393 aa22.87■■□□□ 1.25
SNHG28-203ENST00000621242 CDK19Q9BWU1 502 aa22.86■■□□□ 1.25
SNHG28-203ENST00000621242 CAMTA1Q9Y6Y1 1673 aa22.85■■□□□ 1.25
SNHG28-203ENST00000621242 LARP1Q6PKG0 1096 aaKnown RBP22.85■■□□□ 1.25
SNHG28-203ENST00000621242 ACEP12821 1306 aa22.84■■□□□ 1.25
SNHG28-203ENST00000621242 TOPAZ1Q8N9V7 1692 aa22.84■■□□□ 1.25
SNHG28-203ENST00000621242 NBPF8Q3BBV2 869 aa22.84■■□□□ 1.25
SNHG28-203ENST00000621242 NBPF14Q5TI25 921 aa22.84■■□□□ 1.25
SNHG28-203ENST00000621242 NRKQ7Z2Y5 1582 aa22.84■■□□□ 1.25
SNHG28-203ENST00000621242 STAC3Q96MF2 364 aa22.83■■□□□ 1.25
SNHG28-203ENST00000621242 POLR3AO14802 1390 aaPredicted RBP22.83■■□□□ 1.25
SNHG28-203ENST00000621242 LMO7Q8WWI1 1683 aa22.82■■□□□ 1.24
SNHG28-203ENST00000621242 TCP11L2Q8N4U5 519 aa22.82■■□□□ 1.24
SNHG28-203ENST00000621242 YY1P25490 414 aa22.81■■□□□ 1.24
SNHG28-203ENST00000621242 ABTB2Q8N961 1025 aa22.81■■□□□ 1.24
SNHG28-203ENST00000621242 CCDC61Q9Y6R9 512 aa22.8■■□□□ 1.24
SNHG28-203ENST00000621242 PLEKHG3A1L390 1219 aa22.79■■□□□ 1.24
SNHG28-203ENST00000621242 PARP4Q9UKK3 1724 aaKnown RBP22.79■■□□□ 1.24
SNHG28-203ENST00000621242 CPDO75976 1380 aa22.78■■□□□ 1.24
SNHG28-203ENST00000621242 PPP1R1BQ9UD71 204 aaPredicted RBP22.77■■□□□ 1.24
SNHG28-203ENST00000621242 THRAP3Q9Y2W1 955 aaKnown RBP22.77■■□□□ 1.24
SNHG28-203ENST00000621242 SPON1Q9HCB6 807 aa22.76■■□□□ 1.23
SNHG28-203ENST00000621242 USP19O94966 1318 aa22.76■■□□□ 1.23
SNHG28-203ENST00000621242 SBF2Q86WG5 1849 aa22.75■■□□□ 1.23
SNHG28-203ENST00000621242 KCNQ2O43526 872 aa22.75■■□□□ 1.23
SNHG28-203ENST00000621242 GCP02774 474 aa22.74■■□□□ 1.23
SNHG28-203ENST00000621242 NLRP13Q86W25 1043 aa22.74■■□□□ 1.23
SNHG28-203ENST00000621242 COL5A2P05997 1499 aaPredicted RBP22.73■■□□□ 1.23
SNHG28-203ENST00000621242 PEAK1Q9H792 1746 aa22.72■■□□□ 1.23
SNHG28-203ENST00000621242 KIAA1210Q9ULL0 1709 aa22.71■■□□□ 1.23
SNHG28-203ENST00000621242 CRB1P82279 1406 aa22.7■■□□□ 1.22
SNHG28-203ENST00000621242 RGPD3A6NKT7 1758 aaPredicted RBP22.7■■□□□ 1.22
SNHG28-203ENST00000621242 RGPD4Q7Z3J3 1758 aa22.7■■□□□ 1.22
SNHG28-203ENST00000621242 OVOS2A0A0G2JMS6 1433 aa22.69■■□□□ 1.22
SNHG28-203ENST00000621242 OVOS2A0A0J9YW53 1432 aa22.69■■□□□ 1.22
SNHG28-203ENST00000621242 OVOS2Q6IE36 1432 aa22.69■■□□□ 1.22
SNHG28-203ENST00000621242 PPIP5K1Q6PFW1 1433 aa22.69■■□□□ 1.22
SNHG28-203ENST00000621242 ZBTB7CA1YPR0 619 aa22.69■■□□□ 1.22
SNHG28-203ENST00000621242 DCAF8L1A6NGE4 600 aa22.69■■□□□ 1.22
SNHG28-203ENST00000621242 C11orf95C9JLR9 678 aaPredicted RBP22.69■■□□□ 1.22
SNHG28-203ENST00000621242 NINLQ9Y2I6 1382 aa22.68■■□□□ 1.22
SNHG28-203ENST00000621242 SRPK2P78362 688 aaKnown RBP22.68■■□□□ 1.22
SNHG28-203ENST00000621242 LRRC37A3O60309 1634 aa22.68■■□□□ 1.22
SNHG28-203ENST00000621242 PLSCR1O15162 318 aa22.67■■□□□ 1.22
SNHG28-203ENST00000621242 NBPF1Q3BBV0 1214 aa22.66■■□□□ 1.22
SNHG28-203ENST00000621242 CABP2Q9NPB3 220 aa22.66■■□□□ 1.22
SNHG28-203ENST00000621242 CASZ1Q86V15 1759 aa22.66■■□□□ 1.22
SNHG28-203ENST00000621242 DDB1Q16531 1140 aa22.65■■□□□ 1.22
SNHG28-203ENST00000621242 PTF1AQ7RTS3 328 aa22.65■■□□□ 1.22
SNHG28-203ENST00000621242 ANO8Q9HCE9 1232 aaPredicted RBP22.65■■□□□ 1.22
SNHG28-203ENST00000621242 NLRP6P59044 892 aa22.64■■□□□ 1.21
SNHG28-203ENST00000621242 WNK3Q9BYP7 1800 aa22.64■■□□□ 1.21
SNHG28-203ENST00000621242 AATKQ6ZMQ8 1374 aa22.63■■□□□ 1.21
SNHG28-203ENST00000621242 COL18A1P39060 1754 aa22.63■■□□□ 1.21
SNHG28-203ENST00000621242 TOM1L2Q6ZVM7 507 aa22.63■■□□□ 1.21
SNHG28-203ENST00000621242 BCL11BQ9C0K0 894 aaPredicted RBP22.62■■□□□ 1.21
SNHG28-203ENST00000621242 PDGFDQ9GZP0 370 aaPredicted RBP22.62■■□□□ 1.21
SNHG28-203ENST00000621242 AKAP12Q02952 1782 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms