RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 ARHGEF28Q8N1W1 1705 aaKnown RBP32.24■■■□□ 2.75
SRRT-218ENST00000620394 THSD7AQ9UPZ6 1657 aa32.24■■■□□ 2.75
SRRT-218ENST00000620394 FAM98CQ17RN3 349 aaKnown RBP32.22■■■□□ 2.75
SRRT-218ENST00000620394 BTG4Q9NY30 223 aa32.22■■■□□ 2.75
SRRT-218ENST00000620394 TNS1Q9HBL0 1735 aaKnown RBP32.21■■■□□ 2.75
SRRT-218ENST00000620394 ITSN1Q15811 1721 aa32.2■■■□□ 2.75
SRRT-218ENST00000620394 KIAA1210Q9ULL0 1709 aa32.2■■■□□ 2.75
SRRT-218ENST00000620394 KDM2AQ9Y2K7 1162 aa32.2■■■□□ 2.75
SRRT-218ENST00000620394 DISP2A7MBM2 1401 aa32.17■■■□□ 2.74
SRRT-218ENST00000620394 TRAK1Q9UPV9 953 aa32.16■■■□□ 2.74
SRRT-218ENST00000620394 PSDA5PKW4 1024 aaPredicted RBP32.15■■■□□ 2.74
SRRT-218ENST00000620394 PRR36Q9H6K5 1346 aa32.15■■■□□ 2.74
SRRT-218ENST00000620394 SPATA31A5Q5VU36 1347 aa32.14■■■□□ 2.74
SRRT-218ENST00000620394 SPATA31A7Q8IWB4 1347 aa32.14■■■□□ 2.74
SRRT-218ENST00000620394 HIRIP3Q9BW71 556 aaPredicted RBP32.13■■■□□ 2.73
SRRT-218ENST00000620394 PHRF1Q9P1Y6 1649 aaKnown RBP32.13■■■□□ 2.73
SRRT-218ENST00000620394 MINK1Q8N4C8 1332 aaPredicted RBP32.11■■■□□ 2.73
SRRT-218ENST00000620394 WASLO00401 505 aaPredicted RBP32.08■■■□□ 2.73
SRRT-218ENST00000620394 EN1Q05925 392 aaPredicted RBP32.08■■■□□ 2.73
SRRT-218ENST00000620394 PRDM11Q9NQV5 511 aa32.08■■■□□ 2.73
SRRT-218ENST00000620394 ATP7BP35670 1465 aa32.07■■■□□ 2.72
SRRT-218ENST00000620394 NGDNQ8NEJ9 315 aaKnown RBP32.06■■■□□ 2.72
SRRT-218ENST00000620394 PAK3O75914 559 aaPredicted RBP32.03■■■□□ 2.72
SRRT-218ENST00000620394 FAM182BQ5T319 152 aa32.03■■■□□ 2.72
SRRT-218ENST00000620394 TOPAZ1Q8N9V7 1692 aa32.02■■■□□ 2.72
SRRT-218ENST00000620394 SPATA31A1Q5TZJ5 1347 aa32■■■□□ 2.71
SRRT-218ENST00000620394 KIAA0232Q92628 1395 aa32■■■□□ 2.71
SRRT-218ENST00000620394 R3HDM1Q15032 1099 aaKnown RBP31.99■■■□□ 2.71
SRRT-218ENST00000620394 RREB1Q92766 1687 aa31.99■■■□□ 2.71
SRRT-218ENST00000620394 PARD3Q8TEW0 1356 aa31.97■■■□□ 2.71
SRRT-218ENST00000620394 NRKQ7Z2Y5 1582 aa31.96■■■□□ 2.71
SRRT-218ENST00000620394 FAM196AQ6ZSG2 479 aa31.95■■■□□ 2.71
SRRT-218ENST00000620394 EZH2Q15910 746 aaKnown RBP31.94■■■□□ 2.7
SRRT-218ENST00000620394 NUDT16Q96DE0 195 aaKnown RBP31.92■■■□□ 2.7
SRRT-218ENST00000620394 NUP188Q5SRE5 1749 aa31.92■■■□□ 2.7
SRRT-218ENST00000620394 SSH2Q76I76 1423 aa31.92■■■□□ 2.7
SRRT-218ENST00000620394 STRN4Q9NRL3 753 aa31.91■■■□□ 2.7
SRRT-218ENST00000620394 POLR3AO14802 1390 aaPredicted RBP31.91■■■□□ 2.7
SRRT-218ENST00000620394 LMO7Q8WWI1 1683 aa31.9■■■□□ 2.7
SRRT-218ENST00000620394 TRIM37O94972 964 aa31.9■■■□□ 2.7
SRRT-218ENST00000620394 CHRNA2Q15822 529 aa31.9■■■□□ 2.7
SRRT-218ENST00000620394 CAMKK2Q96RR4 588 aa31.9■■■□□ 2.7
SRRT-218ENST00000620394 NBPF1Q3BBV0 1214 aa31.88■■■□□ 2.69
SRRT-218ENST00000620394 TRPM1Q7Z4N2 1603 aa31.87■■■□□ 2.69
SRRT-218ENST00000620394 QRICH2Q9H0J4 1663 aa31.86■■■□□ 2.69
SRRT-218ENST00000620394 BARGINQ6ZT62 677 aa31.86■■■□□ 2.69
SRRT-218ENST00000620394 ZC3H6P61129 1189 aaKnown RBP31.85■■■□□ 2.69
SRRT-218ENST00000620394 PARP4Q9UKK3 1724 aaKnown RBP31.83■■■□□ 2.69
SRRT-218ENST00000620394 CAMTA1Q9Y6Y1 1673 aa31.83■■■□□ 2.69
SRRT-218ENST00000620394 APBA3O96018 575 aa31.83■■■□□ 2.69
SRRT-218ENST00000620394 CDK19Q9BWU1 502 aa31.83■■■□□ 2.69
SRRT-218ENST00000620394 CPDO75976 1380 aa31.82■■■□□ 2.69
SRRT-218ENST00000620394 NUTM2GQ5VZR2 741 aa31.82■■■□□ 2.68
SRRT-218ENST00000620394 USP35Q9P2H5 1018 aa31.82■■■□□ 2.68
SRRT-218ENST00000620394 ACEP12821 1306 aa31.81■■■□□ 2.68
SRRT-218ENST00000620394 PDE3BQ13370 1112 aa31.81■■■□□ 2.68
SRRT-218ENST00000620394 L3MBTL2Q969R5 705 aa31.81■■■□□ 2.68
SRRT-218ENST00000620394 EVA1CP58658 441 aa31.8■■■□□ 2.68
SRRT-218ENST00000620394 CCDC61Q9Y6R9 512 aa31.79■■■□□ 2.68
SRRT-218ENST00000620394 USP19O94966 1318 aa31.78■■■□□ 2.68
SRRT-218ENST00000620394 CENPJQ9HC77 1338 aaPredicted RBP31.78■■■□□ 2.68
SRRT-218ENST00000620394 RGPD3A6NKT7 1758 aaPredicted RBP31.77■■■□□ 2.68
SRRT-218ENST00000620394 RGPD4Q7Z3J3 1758 aa31.77■■■□□ 2.68
SRRT-218ENST00000620394 NBPF8Q3BBV2 869 aa31.77■■■□□ 2.68
SRRT-218ENST00000620394 TCP11L2Q8N4U5 519 aa31.77■■■□□ 2.68
SRRT-218ENST00000620394 PLEKHG3A1L390 1219 aa31.76■■■□□ 2.67
SRRT-218ENST00000620394 LARP1Q6PKG0 1096 aaKnown RBP31.75■■■□□ 2.67
SRRT-218ENST00000620394 ABTB2Q8N961 1025 aa31.75■■■□□ 2.67
SRRT-218ENST00000620394 COL5A2P05997 1499 aaPredicted RBP31.74■■■□□ 2.67
SRRT-218ENST00000620394 SIN3AQ96ST3 1273 aa31.74■■■□□ 2.67
SRRT-218ENST00000620394 THRAP3Q9Y2W1 955 aaKnown RBP31.74■■■□□ 2.67
SRRT-218ENST00000620394 NBPF14Q5TI25 921 aa31.73■■■□□ 2.67
SRRT-218ENST00000620394 PEAK1Q9H792 1746 aa31.71■■■□□ 2.67
SRRT-218ENST00000620394 LRRC37A3O60309 1634 aa31.71■■■□□ 2.67
SRRT-218ENST00000620394 C11orf95C9JLR9 678 aaPredicted RBP31.7■■■□□ 2.67
SRRT-218ENST00000620394 PPIP5K1Q6PFW1 1433 aa31.69■■■□□ 2.66
SRRT-218ENST00000620394 BRD4O60885 1362 aaPredicted RBP31.68■■■□□ 2.66
SRRT-218ENST00000620394 CRB1P82279 1406 aa31.68■■■□□ 2.66
SRRT-218ENST00000620394 NLRP13Q86W25 1043 aa31.68■■■□□ 2.66
SRRT-218ENST00000620394 WNK3Q9BYP7 1800 aa31.68■■■□□ 2.66
SRRT-218ENST00000620394 OVOS2A0A0G2JMS6 1433 aa31.67■■■□□ 2.66
SRRT-218ENST00000620394 OVOS2A0A0J9YW53 1432 aa31.67■■■□□ 2.66
SRRT-218ENST00000620394 OVOS2Q6IE36 1432 aa31.67■■■□□ 2.66
SRRT-218ENST00000620394 SBF2Q86WG5 1849 aa31.66■■■□□ 2.66
SRRT-218ENST00000620394 SLIT3O75094 1523 aa31.65■■■□□ 2.66
SRRT-218ENST00000620394 GCP02774 474 aa31.64■■■□□ 2.66
SRRT-218ENST00000620394 SRPK2P78362 688 aaKnown RBP31.64■■■□□ 2.66
SRRT-218ENST00000620394 ROCK2O75116 1388 aaKnown RBP31.64■■■□□ 2.66
SRRT-218ENST00000620394 NEUROD1Q13562 356 aa31.62■■■□□ 2.65
SRRT-218ENST00000620394 NINLQ9Y2I6 1382 aa31.61■■■□□ 2.65
SRRT-218ENST00000620394 SPON1Q9HCB6 807 aa31.61■■■□□ 2.65
SRRT-218ENST00000620394 CABP2Q9NPB3 220 aa31.61■■■□□ 2.65
SRRT-218ENST00000620394 USP6P35125 1406 aa31.59■■■□□ 2.65
SRRT-218ENST00000620394 PPP1R1BQ9UD71 204 aaPredicted RBP31.59■■■□□ 2.65
SRRT-218ENST00000620394 AKAP12Q02952 1782 aa31.58■■■□□ 2.65
SRRT-218ENST00000620394 AATKQ6ZMQ8 1374 aa31.58■■■□□ 2.65
SRRT-218ENST00000620394 YY1P25490 414 aa31.58■■■□□ 2.65
SRRT-218ENST00000620394 CASZ1Q86V15 1759 aa31.58■■■□□ 2.65
SRRT-218ENST00000620394 PIK3C2AO00443 1686 aa31.57■■■□□ 2.65
SRRT-218ENST00000620394 COL18A1P39060 1754 aa31.56■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms