RNA–Protein interactions for RNA: ENST00000619151.4

BRF1-221, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5 BASIC

Gene BRF1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-221ENST00000619151 PLEKHG3A1L390 1219 aa37.29■■■■□ 3.56
BRF1-221ENST00000619151 RGPD8O14715 1765 aaPredicted RBP37.28■■■■□ 3.56
BRF1-221ENST00000619151 TOM1O60784 492 aa37.28■■■■□ 3.56
BRF1-221ENST00000619151 ZBED9Q6R2W3 1325 aa37.27■■■■□ 3.56
BRF1-221ENST00000619151 FYB1O15117 783 aa37.26■■■■□ 3.56
BRF1-221ENST00000619151 ESCO1Q5FWF5 840 aa37.25■■■■□ 3.55
BRF1-221ENST00000619151 ORAI2Q96SN7 254 aa37.25■■■■□ 3.55
BRF1-221ENST00000619151 POLR3AO14802 1390 aaPredicted RBP37.24■■■■□ 3.55
BRF1-221ENST00000619151 WDR43Q15061 677 aaKnown RBP eCLIP37.23■■■■□ 3.55
BRF1-221ENST00000619151 GGNBP2Q9H3C7 697 aa37.23■■■■□ 3.55
BRF1-221ENST00000619151 PHF8Q9UPP1 1060 aa37.22■■■■□ 3.55
BRF1-221ENST00000619151 TNNT2P45379 298 aaPredicted RBP37.19■■■■□ 3.54
BRF1-221ENST00000619151 BRINP3Q76B58 766 aa37.19■■■■□ 3.54
BRF1-221ENST00000619151 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.19■■■■□ 3.54
BRF1-221ENST00000619151 ACEP12821 1306 aa37.18■■■■□ 3.54
BRF1-221ENST00000619151 UBAP1LF5GYI3 381 aa37.18■■■■□ 3.54
BRF1-221ENST00000619151 PMFBP1Q8TBY8 1022 aa37.17■■■■□ 3.54
BRF1-221ENST00000619151 CFAP53Q96M91 514 aa37.17■■■■□ 3.54
BRF1-221ENST00000619151 BLMP54132 1417 aaPredicted RBP37.17■■■■□ 3.54
BRF1-221ENST00000619151 NRKQ7Z2Y5 1582 aa37.15■■■■□ 3.54
BRF1-221ENST00000619151 USP6P35125 1406 aa37.14■■■■□ 3.54
BRF1-221ENST00000619151 KIF1AQ12756 1690 aa37.14■■■■□ 3.54
BRF1-221ENST00000619151 NGDNQ8NEJ9 315 aaKnown RBP37.11■■■■□ 3.53
BRF1-221ENST00000619151 SCAF1Q9H7N4 1312 aaKnown RBP37.11■■■■□ 3.53
BRF1-221ENST00000619151 MTHFSP49914 203 aa37.1■■■■□ 3.53
BRF1-221ENST00000619151 FOXO3O43524 673 aa37.08■■■■□ 3.53
BRF1-221ENST00000619151 TTC21BQ7Z4L5 1316 aa37.07■■■■□ 3.53
BRF1-221ENST00000619151 ADAMTS8Q9UP79 889 aa37.07■■■■□ 3.53
BRF1-221ENST00000619151 COG3Q96JB2 828 aa37.06■■■■□ 3.52
BRF1-221ENST00000619151 TTC21AQ8NDW8 1320 aa37.06■■■■□ 3.52
BRF1-221ENST00000619151 NME9Q86XW9 330 aa37.05■■■■□ 3.52
BRF1-221ENST00000619151 ROBO1Q9Y6N7 1651 aa37.05■■■■□ 3.52
BRF1-221ENST00000619151 NPHP3Q7Z494 1330 aa37.05■■■■□ 3.52
BRF1-221ENST00000619151 PIP4K2BP78356 416 aa37.03■■■■□ 3.52
BRF1-221ENST00000619151 SSH2Q76I76 1423 aa37.02■■■■□ 3.52
BRF1-221ENST00000619151 PSME1Q06323 249 aa37.02■■■■□ 3.52
BRF1-221ENST00000619151 SHPRHQ149N8 1683 aa37■■■■□ 3.51
BRF1-221ENST00000619151 AATKQ6ZMQ8 1374 aa37■■■■□ 3.51
BRF1-221ENST00000619151 KRT28Q7Z3Y7 464 aa36.98■■■■□ 3.51
BRF1-221ENST00000619151 DDX17Q92841 729 aaKnown RBP36.98■■■■□ 3.51
BRF1-221ENST00000619151 NHSL1Q5SYE7 1610 aa36.97■■■■□ 3.51
BRF1-221ENST00000619151 SOS2Q07890 1332 aaPredicted RBP36.96■■■■□ 3.51
BRF1-221ENST00000619151 OVOS2A0A0J9YW53 1432 aa36.95■■■■□ 3.51
BRF1-221ENST00000619151 OVOS2Q6IE36 1432 aa36.95■■■■□ 3.51
BRF1-221ENST00000619151 AHDC1Q5TGY3 1603 aaPredicted RBP36.95■■■■□ 3.5
BRF1-221ENST00000619151 PXDNQ92626 1479 aa36.94■■■■□ 3.5
BRF1-221ENST00000619151 NUDCQ9Y266 331 aa36.93■■■■□ 3.5
BRF1-221ENST00000619151 GTF3C3Q9Y5Q9 886 aa36.93■■■■□ 3.5
BRF1-221ENST00000619151 SMG6Q86US8 1419 aaKnown RBP36.92■■■■□ 3.5
BRF1-221ENST00000619151 XPCQ01831 940 aaPredicted RBP36.91■■■■□ 3.5
BRF1-221ENST00000619151 PNPLA6Q8IY17 1366 aa36.91■■■■□ 3.5
BRF1-221ENST00000619151 COL3A1P02461 1466 aaPredicted RBP36.91■■■■□ 3.5
BRF1-221ENST00000619151 SBNO1A3KN83 1393 aa36.9■■■■□ 3.5
BRF1-221ENST00000619151 ZRANB1Q9UGI0 708 aa36.9■■■■□ 3.5
BRF1-221ENST00000619151 USP31Q70CQ4 1352 aa36.89■■■■□ 3.5
BRF1-221ENST00000619151 MAP2P11137 1827 aaKnown RBP36.89■■■■□ 3.5
BRF1-221ENST00000619151 POLKQ9UBT6 870 aa36.88■■■■□ 3.49
BRF1-221ENST00000619151 TRPM3Q9HCF6 1732 aaPredicted RBP36.87■■■■□ 3.49
BRF1-221ENST00000619151 PDE3BQ13370 1112 aa36.87■■■■□ 3.49
BRF1-221ENST00000619151 CDK12Q9NYV4 1490 aaPredicted RBP36.86■■■■□ 3.49
BRF1-221ENST00000619151 NGEFQ8N5V2 710 aa36.85■■■■□ 3.49
BRF1-221ENST00000619151 SPATA31A3Q5VYP0 1347 aa36.83■■■■□ 3.49
BRF1-221ENST00000619151 DIAPH1O60610 1272 aaKnown RBP36.83■■■■□ 3.49
BRF1-221ENST00000619151 PAK3O75914 559 aaPredicted RBP36.83■■■■□ 3.49
BRF1-221ENST00000619151 PIK3C2AO00443 1686 aa36.82■■■■□ 3.49
BRF1-221ENST00000619151 USP54Q70EL1 1684 aa36.81■■■■□ 3.48
BRF1-221ENST00000619151 TNS3Q68CZ2 1445 aa36.8■■■■□ 3.48
BRF1-221ENST00000619151 CCDC146Q8IYE0 955 aa36.8■■■■□ 3.48
BRF1-221ENST00000619151 LRRC59Q96AG4 307 aaKnown RBP36.8■■■■□ 3.48
BRF1-221ENST00000619151 PHLPP1O60346 1717 aa36.79■■■■□ 3.48
BRF1-221ENST00000619151 SENP3-EIF4A1A0A087X0R7 540 aa36.79■■■■□ 3.48
BRF1-221ENST00000619151 PPM1GO15355 546 aaPredicted RBP36.79■■■■□ 3.48
BRF1-221ENST00000619151 U2AF1L5P0DN76 240 aaPredicted RBP36.79■■■■□ 3.48
BRF1-221ENST00000619151 U2AF1Q01081 240 aaKnown RBP eCLIP36.79■■■■□ 3.48
BRF1-221ENST00000619151 RUNDC1Q96C34 613 aa36.79■■■■□ 3.48
BRF1-221ENST00000619151 SALL2Q9Y467 1007 aaPredicted RBP36.79■■■■□ 3.48
BRF1-221ENST00000619151 ABTB2Q8N961 1025 aa36.78■■■■□ 3.48
BRF1-221ENST00000619151 COL16A1Q07092 1604 aaPredicted RBP36.77■■■■□ 3.48
BRF1-221ENST00000619151 FBXO41Q8TF61 875 aa36.77■■■■□ 3.48
BRF1-221ENST00000619151 EMILIN1Q9Y6C2 1016 aa36.77■■■■□ 3.48
BRF1-221ENST00000619151 ALS2Q96Q42 1657 aa36.77■■■■□ 3.48
BRF1-221ENST00000619151 ARHGEF10O15013 1369 aa36.75■■■■□ 3.47
BRF1-221ENST00000619151 U2SURPO15042 1029 aaKnown RBP36.75■■■■□ 3.47
BRF1-221ENST00000619151 FBLN1P23142 703 aa36.74■■■■□ 3.47
BRF1-221ENST00000619151 PNNQ9H307 717 aaKnown RBP36.74■■■■□ 3.47
BRF1-221ENST00000619151 NLRP6P59044 892 aa36.73■■■■□ 3.47
BRF1-221ENST00000619151 APAF1O14727 1248 aa36.72■■■■□ 3.47
BRF1-221ENST00000619151 RRS1Q15050 365 aaKnown RBP36.72■■■■□ 3.47
BRF1-221ENST00000619151 HSPA1LP34931 641 aa36.69■■■■□ 3.46
BRF1-221ENST00000619151 LMOD2Q6P5Q4 547 aa36.69■■■■□ 3.46
BRF1-221ENST00000619151 NEFLP07196 543 aa36.67■■■■□ 3.46
BRF1-221ENST00000619151 NCBP3Q53F19 620 aaKnown RBP36.66■■■■□ 3.46
BRF1-221ENST00000619151 NUTM2GQ5VZR2 741 aa36.65■■■■□ 3.46
BRF1-221ENST00000619151 MARF1Q9Y4F3 1742 aaKnown RBP36.65■■■■□ 3.46
BRF1-221ENST00000619151 ZNF521Q96K83 1311 aa36.65■■■■□ 3.46
BRF1-221ENST00000619151 USP19O94966 1318 aa36.64■■■■□ 3.46
BRF1-221ENST00000619151 KIF24Q5T7B8 1368 aa36.62■■■■□ 3.45
BRF1-221ENST00000619151 IL13P35225 146 aa36.62■■■■□ 3.45
BRF1-221ENST00000619151 MAPK8IP3Q9UPT6 1336 aa36.61■■■■□ 3.45
BRF1-221ENST00000619151 FCHSD2O94868 740 aa36.61■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms