RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 GOLGA6L7A0A1B0GV03 622 aa3.71□□□□□ -1.82
NEB-220ENST00000618972 HDGFP51858 240 aaKnown RBP3.71□□□□□ -1.82
NEB-220ENST00000618972 NUTM1Q86Y26 1132 aa3.71□□□□□ -1.82
NEB-220ENST00000618972 GRPEL1Q9HAV7 217 aa3.71□□□□□ -1.82
NEB-220ENST00000618972 SCRIBQ14160 1630 aa3.71□□□□□ -1.82
NEB-220ENST00000618972 TBC1D32Q96NH3 1257 aa3.71□□□□□ -1.82
NEB-220ENST00000618972 FTSJ3Q8IY81 847 aaKnown RBP3.71□□□□□ -1.82
NEB-220ENST00000618972 TTC12Q9H892 705 aaPredicted RBP3.7□□□□□ -1.82
NEB-220ENST00000618972 ST18O60284 1047 aa3.7□□□□□ -1.82
NEB-220ENST00000618972 TBC1D9Q6ZT07 1266 aa3.7□□□□□ -1.82
NEB-220ENST00000618972 VAMP4O75379 141 aa3.7□□□□□ -1.82
NEB-220ENST00000618972 BAG4O95429 457 aaKnown RBP3.7□□□□□ -1.82
NEB-220ENST00000618972 SLFNL1Q499Z3 407 aa3.7□□□□□ -1.82
NEB-220ENST00000618972 CERS3Q8IU89 383 aa3.7□□□□□ -1.82
NEB-220ENST00000618972 TXLNBQ8N3L3 684 aa3.7□□□□□ -1.82
NEB-220ENST00000618972 TMPOP42166 694 aaKnown RBP3.7□□□□□ -1.82
NEB-220ENST00000618972 CCDC191Q8NCU4 936 aa3.7□□□□□ -1.82
NEB-220ENST00000618972 STK31Q9BXU1 1019 aa3.7□□□□□ -1.82
NEB-220ENST00000618972 ZBTB7BO15156 539 aaPredicted RBP3.7□□□□□ -1.82
NEB-220ENST00000618972 FAM184AQ8NB25 1140 aa3.7□□□□□ -1.82
NEB-220ENST00000618972 KCNQ3O43525 872 aa3.7□□□□□ -1.82
NEB-220ENST00000618972 ANXA1P04083 346 aa3.7□□□□□ -1.82
NEB-220ENST00000618972 PLCD3Q8N3E9 789 aa3.7□□□□□ -1.82
NEB-220ENST00000618972 RUNDC1Q96C34 613 aa3.7□□□□□ -1.82
NEB-220ENST00000618972 ZBTB40Q9NUA8 1239 aa3.7□□□□□ -1.82
NEB-220ENST00000618972 PPARDQ03181 441 aa3.7□□□□□ -1.82
NEB-220ENST00000618972 EIF2S2P20042 333 aaKnown RBP3.7□□□□□ -1.82
NEB-220ENST00000618972 ZKSCAN2Q63HK3 967 aa3.7□□□□□ -1.82
NEB-220ENST00000618972 SRPK2P78362 688 aaKnown RBP3.7□□□□□ -1.82
NEB-220ENST00000618972 ZNF692Q9BU19 519 aaPredicted RBP3.7□□□□□ -1.82
NEB-220ENST00000618972 USP26Q9BXU7 913 aa3.7□□□□□ -1.82
NEB-220ENST00000618972 UPF3BQ9BZI7 483 aaKnown RBP3.7□□□□□ -1.82
NEB-220ENST00000618972 LRRFIP1Q32MZ4 808 aaKnown RBP3.7□□□□□ -1.82
NEB-220ENST00000618972 DYNC1I1O14576 645 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 RRS1Q15050 365 aaKnown RBP3.69□□□□□ -1.82
NEB-220ENST00000618972 MRPL50Q8N5N7 158 aaKnown RBP3.69□□□□□ -1.82
NEB-220ENST00000618972 RILPL2Q969X0 211 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 NEK4P51957 841 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 TMX1Q9H3N1 280 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 MYO6Q9UM54 1294 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 KIF2CQ99661 725 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 INCENPQ9NQS7 918 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 TRIM27P14373 513 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 USP48Q86UV5 1035 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 TMX4Q9H1E5 349 aaPredicted RBP3.69□□□□□ -1.82
NEB-220ENST00000618972 MCM10Q7L590 875 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.69□□□□□ -1.82
NEB-220ENST00000618972 TTLL5Q6EMB2 1281 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 RSPH4AQ5TD94 716 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 C10orf67Q8IYJ2 551 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 TIGD1Q96MW7 591 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 NUCB1Q02818 461 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 ARID5BQ14865 1188 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 GIMAP6Q6P9H5 292 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 KCNA4P22459 653 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 ZBTB22O15209 634 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 PLCD4Q9BRC7 762 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 BMS1Q14692 1282 aaKnown RBP3.69□□□□□ -1.82
NEB-220ENST00000618972 IL1RAPL2Q9NP60 686 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 ERLIN2O94905 339 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 LEKR1Q6ZMV7 388 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 RABEP1Q15276 862 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 KIAA1328Q86T90 577 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 ARAP1Q96P48 1450 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 PTPN21Q16825 1174 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 CAMK4Q16566 473 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 ANKRD20A12PQ8NF67 263 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 LMBRD1Q9NUN5 540 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 GON4LQ3T8J9 2241 aa3.69□□□□□ -1.82
NEB-220ENST00000618972 TXNDC2Q86VQ3 553 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.68□□□□□ -1.82
NEB-220ENST00000618972 H0YHG0 523 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 CHD1LQ86WJ1 897 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 NEMFO60524 1076 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 SKIDA1Q1XH10 827 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 CCDC91Q7Z6B0 441 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 CEBPZQ03701 1054 aaKnown RBP3.68□□□□□ -1.82
NEB-220ENST00000618972 PLEKHM2Q8IWE5 1019 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 ISM2Q6H9L7 571 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 TACO1Q9BSH4 297 aaKnown RBP3.68□□□□□ -1.82
NEB-220ENST00000618972 BECN2A8MW95 431 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 BBXQ8WY36 941 aaPredicted RBP3.68□□□□□ -1.82
NEB-220ENST00000618972 USP16Q9Y5T5 823 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 UVSSAQ2YD98 709 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 NRBP1Q9UHY1 535 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 USP47Q96K76 1375 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 MICALCLQ6ZW33 695 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 TCEANC2Q96MN5 208 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 SHTN1A0MZ66 631 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 DNAJC21Q5F1R6 531 aaKnown RBP3.68□□□□□ -1.82
NEB-220ENST00000618972 GPT2Q8TD30 523 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 CEP89Q96ST8 783 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 CDK19Q9BWU1 502 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 FYB1O15117 783 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 REC8O95072 547 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 IPO7O95373 1038 aaKnown RBP3.68□□□□□ -1.82
NEB-220ENST00000618972 SLC4A2P04920 1241 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 PDE3AQ14432 1141 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 HINFPQ9BQA5 517 aa3.68□□□□□ -1.82
NEB-220ENST00000618972 PRIMPOLQ96LW4 560 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms