RNA–Protein interactions for RNA: ENST00000618596.1

GPC5-204, Transcript of glypican 5, humanhuman

TSL 5 BASIC

Gene GPC5, Length 960 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-204ENST00000618596 PMFBP1Q8TBY8 1022 aa13.13□□□□□ -0.31
GPC5-204ENST00000618596 POLR3AO14802 1390 aaPredicted RBP13.12□□□□□ -0.31
GPC5-204ENST00000618596 PPP2R1AP30153 589 aa13.12□□□□□ -0.31
GPC5-204ENST00000618596 MORC1Q86VD1 984 aa13.12□□□□□ -0.31
GPC5-204ENST00000618596 NLRP13Q86W25 1043 aa13.12□□□□□ -0.31
GPC5-204ENST00000618596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.12□□□□□ -0.31
GPC5-204ENST00000618596 C19orf44Q9H6X5 657 aa13.12□□□□□ -0.31
GPC5-204ENST00000618596 USP6P35125 1406 aa13.12□□□□□ -0.31
GPC5-204ENST00000618596 DCCP43146 1447 aa13.12□□□□□ -0.31
GPC5-204ENST00000618596 GGNBP2Q9H3C7 697 aa13.11□□□□□ -0.31
GPC5-204ENST00000618596 C1orf167Q5SNV9 1468 aa13.1□□□□□ -0.31
GPC5-204ENST00000618596 MSH6P52701 1360 aa13.1□□□□□ -0.31
GPC5-204ENST00000618596 FYB1O15117 783 aa13.1□□□□□ -0.31
GPC5-204ENST00000618596 NGDNQ8NEJ9 315 aaKnown RBP13.1□□□□□ -0.31
GPC5-204ENST00000618596 ZNF692Q9BU19 519 aaPredicted RBP13.1□□□□□ -0.31
GPC5-204ENST00000618596 PHF8Q9UPP1 1060 aa13.1□□□□□ -0.31
GPC5-204ENST00000618596 MST1RQ04912 1400 aa13.1□□□□□ -0.31
GPC5-204ENST00000618596 SSH2Q76I76 1423 aa13.09□□□□□ -0.31
GPC5-204ENST00000618596 NME9Q86XW9 330 aa13.09□□□□□ -0.31
GPC5-204ENST00000618596 TTC21BQ7Z4L5 1316 aa13.09□□□□□ -0.31
GPC5-204ENST00000618596 KIF1AQ12756 1690 aa13.08□□□□□ -0.31
GPC5-204ENST00000618596 ATF3P18847 181 aa13.08□□□□□ -0.32
GPC5-204ENST00000618596 TNNT2P45379 298 aaPredicted RBP13.08□□□□□ -0.32
GPC5-204ENST00000618596 ESCO1Q5FWF5 840 aa13.08□□□□□ -0.32
GPC5-204ENST00000618596 ORAI2Q96SN7 254 aa13.07□□□□□ -0.32
GPC5-204ENST00000618596 ZRANB1Q9UGI0 708 aa13.07□□□□□ -0.32
GPC5-204ENST00000618596 CADPS2Q86UW7 1296 aa13.06□□□□□ -0.32
GPC5-204ENST00000618596 FAM9BQ8IZU0 186 aa13.06□□□□□ -0.32
GPC5-204ENST00000618596 PIK3C2AO00443 1686 aa13.05□□□□□ -0.32
GPC5-204ENST00000618596 PNISRQ8TF01 805 aaKnown RBP13.05□□□□□ -0.32
GPC5-204ENST00000618596 TTC21AQ8NDW8 1320 aa13.05□□□□□ -0.32
GPC5-204ENST00000618596 LTBP4Q8N2S1 1624 aa13.05□□□□□ -0.32
GPC5-204ENST00000618596 OVOS2A0A0J9YW53 1432 aa13.05□□□□□ -0.32
GPC5-204ENST00000618596 OVOS2Q6IE36 1432 aa13.05□□□□□ -0.32
GPC5-204ENST00000618596 COG3Q96JB2 828 aa13.03□□□□□ -0.32
GPC5-204ENST00000618596 TRPM3Q9HCF6 1732 aaPredicted RBP13.02□□□□□ -0.32
GPC5-204ENST00000618596 MARF1Q9Y4F3 1742 aaKnown RBP13.02□□□□□ -0.32
GPC5-204ENST00000618596 USP54Q70EL1 1684 aa13.02□□□□□ -0.33
GPC5-204ENST00000618596 FOXO3O43524 673 aa13.01□□□□□ -0.33
GPC5-204ENST00000618596 MTHFSP49914 203 aa13.01□□□□□ -0.33
GPC5-204ENST00000618596 XPCQ01831 940 aaPredicted RBP13.01□□□□□ -0.33
GPC5-204ENST00000618596 PSME1Q06323 249 aa13.01□□□□□ -0.33
GPC5-204ENST00000618596 USP31Q70CQ4 1352 aa13.01□□□□□ -0.33
GPC5-204ENST00000618596 SHPRHQ149N8 1683 aa13.01□□□□□ -0.33
GPC5-204ENST00000618596 PAK3O75914 559 aaPredicted RBP13□□□□□ -0.33
GPC5-204ENST00000618596 FBLN1P23142 703 aa13□□□□□ -0.33
GPC5-204ENST00000618596 COL3A1P02461 1466 aaPredicted RBP12.99□□□□□ -0.33
GPC5-204ENST00000618596 SMG6Q86US8 1419 aaKnown RBP12.99□□□□□ -0.33
GPC5-204ENST00000618596 AATKQ6ZMQ8 1374 aa12.99□□□□□ -0.33
GPC5-204ENST00000618596 MAP2P11137 1827 aaKnown RBP12.99□□□□□ -0.33
GPC5-204ENST00000618596 HNRNPUQ00839 825 aaKnown RBP eCLIP12.98□□□□□ -0.33
GPC5-204ENST00000618596 NUTM2GQ5VZR2 741 aa12.98□□□□□ -0.33
GPC5-204ENST00000618596 BRINP3Q76B58 766 aa12.98□□□□□ -0.33
GPC5-204ENST00000618596 DDX17Q92841 729 aaKnown RBP12.98□□□□□ -0.33
GPC5-204ENST00000618596 CFAP53Q96M91 514 aa12.98□□□□□ -0.33
GPC5-204ENST00000618596 BLMP54132 1417 aaPredicted RBP12.97□□□□□ -0.33
GPC5-204ENST00000618596 NLRP6P59044 892 aa12.97□□□□□ -0.33
GPC5-204ENST00000618596 WDR43Q15061 677 aaKnown RBP eCLIP12.97□□□□□ -0.33
GPC5-204ENST00000618596 KRT28Q7Z3Y7 464 aa12.97□□□□□ -0.33
GPC5-204ENST00000618596 ABTB2Q8N961 1025 aa12.97□□□□□ -0.33
GPC5-204ENST00000618596 SLAIN2Q9P270 581 aa12.97□□□□□ -0.33
GPC5-204ENST00000618596 POLKQ9UBT6 870 aa12.97□□□□□ -0.33
GPC5-204ENST00000618596 PXDNQ92626 1479 aa12.97□□□□□ -0.33
GPC5-204ENST00000618596 CDK12Q9NYV4 1490 aaPredicted RBP12.97□□□□□ -0.33
GPC5-204ENST00000618596 ALS2Q96Q42 1657 aa12.96□□□□□ -0.33
GPC5-204ENST00000618596 SOX12O15370 315 aa12.96□□□□□ -0.33
GPC5-204ENST00000618596 DSG3P32926 999 aa12.96□□□□□ -0.33
GPC5-204ENST00000618596 EMILIN1Q9Y6C2 1016 aa12.96□□□□□ -0.33
GPC5-204ENST00000618596 PEAK1Q9H792 1746 aa12.96□□□□□ -0.34
GPC5-204ENST00000618596 NPHP3Q7Z494 1330 aa12.95□□□□□ -0.34
GPC5-204ENST00000618596 RRS1Q15050 365 aaKnown RBP12.95□□□□□ -0.34
GPC5-204ENST00000618596 ADAMTS8Q9UP79 889 aa12.95□□□□□ -0.34
GPC5-204ENST00000618596 INSRP06213 1382 aa12.94□□□□□ -0.34
GPC5-204ENST00000618596 PNPLA6Q8IY17 1366 aa12.94□□□□□ -0.34
GPC5-204ENST00000618596 PPM1GO15355 546 aaPredicted RBP12.94□□□□□ -0.34
GPC5-204ENST00000618596 CENPBP07199 599 aaPredicted RBP12.94□□□□□ -0.34
GPC5-204ENST00000618596 SBNO1A3KN83 1393 aa12.94□□□□□ -0.34
GPC5-204ENST00000618596 SLIT3O75094 1523 aa12.93□□□□□ -0.34
GPC5-204ENST00000618596 NFAT5O94916 1531 aa12.93□□□□□ -0.34
GPC5-204ENST00000618596 NHSL1Q5SYE7 1610 aa12.93□□□□□ -0.34
GPC5-204ENST00000618596 SENP3-EIF4A1A0A087X0R7 540 aa12.93□□□□□ -0.34
GPC5-204ENST00000618596 TNS3Q68CZ2 1445 aa12.93□□□□□ -0.34
GPC5-204ENST00000618596 LMOD2Q6P5Q4 547 aa12.92□□□□□ -0.34
GPC5-204ENST00000618596 USP19O94966 1318 aa12.91□□□□□ -0.34
GPC5-204ENST00000618596 MAP3K19Q56UN5 1328 aa12.91□□□□□ -0.34
GPC5-204ENST00000618596 ROBO1Q9Y6N7 1651 aa12.91□□□□□ -0.34
GPC5-204ENST00000618596 MED1Q15648 1581 aaPredicted RBP12.9□□□□□ -0.34
GPC5-204ENST00000618596 LTN1O94822 1766 aa12.9□□□□□ -0.34
GPC5-204ENST00000618596 DIAPH1O60610 1272 aaKnown RBP12.9□□□□□ -0.34
GPC5-204ENST00000618596 PLEKHG5O94827 1062 aa12.9□□□□□ -0.34
GPC5-204ENST00000618596 SPATA31A3Q5VYP0 1347 aa12.89□□□□□ -0.35
GPC5-204ENST00000618596 ZBED9Q6R2W3 1325 aa12.89□□□□□ -0.35
GPC5-204ENST00000618596 PHRF1Q9P1Y6 1649 aaKnown RBP12.89□□□□□ -0.35
GPC5-204ENST00000618596 U2SURPO15042 1029 aaKnown RBP12.89□□□□□ -0.35
GPC5-204ENST00000618596 U2AF1L5P0DN76 240 aaPredicted RBP12.89□□□□□ -0.35
GPC5-204ENST00000618596 U2AF1Q01081 240 aaKnown RBP eCLIP12.89□□□□□ -0.35
GPC5-204ENST00000618596 CCDC146Q8IYE0 955 aa12.89□□□□□ -0.35
GPC5-204ENST00000618596 NUDCQ9Y266 331 aa12.89□□□□□ -0.35
GPC5-204ENST00000618596 SOS2Q07890 1332 aaPredicted RBP12.88□□□□□ -0.35
GPC5-204ENST00000618596 CRYBG1Q9Y4K1 1723 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms