RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 PRKRIP1Q9H875 184 aaPredicted RBP13.33□□□□□ -0.28
CCDC144B-208ENST00000618081 ZNF396Q96N95 335 aaPredicted RBP13.33□□□□□ -0.28
CCDC144B-208ENST00000618081 CDC45O75419 566 aa13.33□□□□□ -0.28
CCDC144B-208ENST00000618081 MCM2P49736 904 aa13.33□□□□□ -0.28
CCDC144B-208ENST00000618081 TRIM21P19474 475 aaKnown RBP13.32□□□□□ -0.28
CCDC144B-208ENST00000618081 EXOC6Q8TAG9 804 aa13.32□□□□□ -0.28
CCDC144B-208ENST00000618081 C22orf23Q9BZE7 217 aa13.32□□□□□ -0.28
CCDC144B-208ENST00000618081 CNNM1Q9NRU3 951 aa13.32□□□□□ -0.28
CCDC144B-208ENST00000618081 SCAPERQ9BY12 1400 aa13.32□□□□□ -0.28
CCDC144B-208ENST00000618081 GNAI3P08754 354 aa13.32□□□□□ -0.28
CCDC144B-208ENST00000618081 DESP17661 470 aa13.32□□□□□ -0.28
CCDC144B-208ENST00000618081 TTC39AQ5SRH9 613 aa13.32□□□□□ -0.28
CCDC144B-208ENST00000618081 ZNHIT6Q9NWK9 470 aaKnown RBP13.32□□□□□ -0.28
CCDC144B-208ENST00000618081 PLEKHO1Q53GL0 409 aaPredicted RBP13.32□□□□□ -0.28
CCDC144B-208ENST00000618081 PPP1R1BQ9UD71 204 aaPredicted RBP13.32□□□□□ -0.28
CCDC144B-208ENST00000618081 CCDC158Q5M9N0 1113 aa13.32□□□□□ -0.28
CCDC144B-208ENST00000618081 JMYQ8N9B5 988 aa13.32□□□□□ -0.28
CCDC144B-208ENST00000618081 LNPKQ9C0E8 428 aa13.32□□□□□ -0.28
CCDC144B-208ENST00000618081 DHX8Q14562 1220 aaKnown RBP13.31□□□□□ -0.28
CCDC144B-208ENST00000618081 SEPT7Q16181 437 aaKnown RBP13.31□□□□□ -0.28
CCDC144B-208ENST00000618081 CCDC39Q9UFE4 941 aa13.31□□□□□ -0.28
CCDC144B-208ENST00000618081 CNTLNQ9NXG0 1405 aa13.31□□□□□ -0.28
CCDC144B-208ENST00000618081 NLRP6P59044 892 aa13.31□□□□□ -0.28
CCDC144B-208ENST00000618081 ATP2B2Q01814 1243 aa13.31□□□□□ -0.28
CCDC144B-208ENST00000618081 GOLGA6L10A6NI86 522 aa13.3□□□□□ -0.28
CCDC144B-208ENST00000618081 H0YHG0 523 aa13.3□□□□□ -0.28
CCDC144B-208ENST00000618081 NEFHP12036 1026 aa13.3□□□□□ -0.28
CCDC144B-208ENST00000618081 SLC4A3P48751 1232 aa13.3□□□□□ -0.28
CCDC144B-208ENST00000618081 TTLL5Q6EMB2 1281 aa13.3□□□□□ -0.28
CCDC144B-208ENST00000618081 NACAP1Q9BZK3 213 aa13.3□□□□□ -0.28
CCDC144B-208ENST00000618081 TSHZ2Q9NRE2 1034 aa13.3□□□□□ -0.28
CCDC144B-208ENST00000618081 SMC2O95347 1197 aa13.29□□□□□ -0.28
CCDC144B-208ENST00000618081 DNAJC2Q99543 621 aaKnown RBP13.29□□□□□ -0.28
CCDC144B-208ENST00000618081 NASPP49321 788 aaPredicted RBP13.29□□□□□ -0.28
CCDC144B-208ENST00000618081 NUTM2GQ5VZR2 741 aa13.29□□□□□ -0.28
CCDC144B-208ENST00000618081 TRIM22Q8IYM9 498 aa13.29□□□□□ -0.28
CCDC144B-208ENST00000618081 ANKRD1Q15327 319 aa13.29□□□□□ -0.28
CCDC144B-208ENST00000618081 FAM13BQ9NYF5 915 aa13.29□□□□□ -0.28
CCDC144B-208ENST00000618081 FAM43AQ8N2R8 423 aa13.29□□□□□ -0.28
CCDC144B-208ENST00000618081 DACH1Q9UI36 760 aa13.28□□□□□ -0.28
CCDC144B-208ENST00000618081 MTERF4Q7Z6M4 381 aaKnown RBP13.28□□□□□ -0.28
CCDC144B-208ENST00000618081 ESCO1Q5FWF5 840 aa13.28□□□□□ -0.28
CCDC144B-208ENST00000618081 TRIM5Q9C035 493 aa13.28□□□□□ -0.28
CCDC144B-208ENST00000618081 DNAI2Q9GZS0 605 aa13.27□□□□□ -0.28
CCDC144B-208ENST00000618081 ZSCAN25Q6NSZ9 544 aa13.27□□□□□ -0.29
CCDC144B-208ENST00000618081 RBM42Q9BTD8 480 aaKnown RBP13.27□□□□□ -0.29
CCDC144B-208ENST00000618081 PDCL3Q9H2J4 239 aa13.27□□□□□ -0.29
CCDC144B-208ENST00000618081 TATP17735 454 aaPredicted RBP13.27□□□□□ -0.29
CCDC144B-208ENST00000618081 GNAI2P04899 355 aa13.27□□□□□ -0.29
CCDC144B-208ENST00000618081 MBD3O95983 291 aa13.26□□□□□ -0.29
CCDC144B-208ENST00000618081 STRN4Q9NRL3 753 aa13.26□□□□□ -0.29
CCDC144B-208ENST00000618081 HECW1Q76N89 1606 aa13.26□□□□□ -0.29
CCDC144B-208ENST00000618081 CCDC69A6NI79 296 aa13.26□□□□□ -0.29
CCDC144B-208ENST00000618081 SURF6O75683 361 aaKnown RBP13.26□□□□□ -0.29
CCDC144B-208ENST00000618081 RBM5P52756 815 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCDC144B-208ENST00000618081 BRPF1P55201 1214 aaPredicted RBP13.26□□□□□ -0.29
CCDC144B-208ENST00000618081 FAM177BA6PVY3 158 aa13.26□□□□□ -0.29
CCDC144B-208ENST00000618081 MPHOSPH8Q99549 860 aa13.25□□□□□ -0.29
CCDC144B-208ENST00000618081 GBP2P32456 591 aaPredicted RBP13.25□□□□□ -0.29
CCDC144B-208ENST00000618081 DEF6Q9H4E7 631 aa13.25□□□□□ -0.29
CCDC144B-208ENST00000618081 CABP2Q9NPB3 220 aa13.25□□□□□ -0.29
CCDC144B-208ENST00000618081 CABP4P57796 275 aa13.24□□□□□ -0.29
CCDC144B-208ENST00000618081 MPHOSPH10O00566 681 aaKnown RBP13.24□□□□□ -0.29
CCDC144B-208ENST00000618081 SYNJ2O15056 1496 aa13.24□□□□□ -0.29
CCDC144B-208ENST00000618081 FGD5Q6ZNL6 1462 aa13.24□□□□□ -0.29
CCDC144B-208ENST00000618081 CDKL5O76039 1030 aa13.24□□□□□ -0.29
CCDC144B-208ENST00000618081 SOGA3Q5TF21 947 aa13.24□□□□□ -0.29
CCDC144B-208ENST00000618081 STK38Q15208 465 aa13.24□□□□□ -0.29
CCDC144B-208ENST00000618081 CCDC57Q2TAC2 916 aa13.24□□□□□ -0.29
CCDC144B-208ENST00000618081 KDM4AO75164 1064 aa13.23□□□□□ -0.29
CCDC144B-208ENST00000618081 MATR3P43243 847 aaKnown RBP eCLIP13.23□□□□□ -0.29
CCDC144B-208ENST00000618081 IQCEQ6IPM2 695 aa13.23□□□□□ -0.29
CCDC144B-208ENST00000618081 ENOX2Q16206 610 aaKnown RBP13.23□□□□□ -0.29
CCDC144B-208ENST00000618081 EZRP15311 586 aaKnown RBP13.23□□□□□ -0.29
CCDC144B-208ENST00000618081 ATP2B1P20020 1258 aa13.23□□□□□ -0.29
CCDC144B-208ENST00000618081 PPFIBP1Q86W92 1011 aa13.23□□□□□ -0.29
CCDC144B-208ENST00000618081 SPG7Q9UQ90 795 aa13.23□□□□□ -0.29
CCDC144B-208ENST00000618081 RABEP1Q15276 862 aa13.23□□□□□ -0.29
CCDC144B-208ENST00000618081 ATAD2BQ9ULI0 1458 aa13.22□□□□□ -0.29
CCDC144B-208ENST00000618081 CCT4P50991 539 aaKnown RBP13.22□□□□□ -0.29
CCDC144B-208ENST00000618081 BRD4O60885 1362 aaPredicted RBP13.22□□□□□ -0.29
CCDC144B-208ENST00000618081 LEKR1Q6ZMV7 388 aa13.22□□□□□ -0.29
CCDC144B-208ENST00000618081 TSPY26PQ9H489 355 aa13.22□□□□□ -0.29
CCDC144B-208ENST00000618081 GOLGA6L7A0A1B0GV03 622 aa13.22□□□□□ -0.29
CCDC144B-208ENST00000618081 SKIDA1Q1XH10 827 aa13.22□□□□□ -0.29
CCDC144B-208ENST00000618081 AXDND1Q5T1B0 1012 aaPredicted RBP13.22□□□□□ -0.29
CCDC144B-208ENST00000618081 PNISRQ8TF01 805 aaKnown RBP13.22□□□□□ -0.29
CCDC144B-208ENST00000618081 ZHX3Q9H4I2 956 aa13.22□□□□□ -0.29
CCDC144B-208ENST00000618081 CCDC181Q5TID7 509 aa13.22□□□□□ -0.29
CCDC144B-208ENST00000618081 CCDC7Q96M83 1385 aa13.22□□□□□ -0.29
CCDC144B-208ENST00000618081 CFAP65Q6ZU64 1925 aaKnown RBP13.22□□□□□ -0.29
CCDC144B-208ENST00000618081 AEBP1Q8IUX7 1158 aa13.22□□□□□ -0.29
CCDC144B-208ENST00000618081 FGD6Q6ZV73 1430 aa13.22□□□□□ -0.29
CCDC144B-208ENST00000618081 CT47B1P0C2W7 299 aaPredicted RBP13.22□□□□□ -0.29
CCDC144B-208ENST00000618081 BMP2KQ9NSY1 1161 aaPredicted RBP13.22□□□□□ -0.29
CCDC144B-208ENST00000618081 NOL7Q9UMY1 257 aaKnown RBP13.22□□□□□ -0.29
CCDC144B-208ENST00000618081 ANKRD62A6NC57 917 aa13.21□□□□□ -0.29
CCDC144B-208ENST00000618081 SERPINC1P01008 464 aa13.21□□□□□ -0.29
CCDC144B-208ENST00000618081 PANK1Q8TE04 598 aa13.21□□□□□ -0.29
CCDC144B-208ENST00000618081 GGNBP2Q9H3C7 697 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms