RNA–Protein interactions for RNA: ENST00000617848.4

CNTNAP3B-213, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 290 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-213ENST00000617848 ADGRB2O60241 1585 aa11.71□□□□□ -0.54
CNTNAP3B-213ENST00000617848 INSRP06213 1382 aa11.7□□□□□ -0.54
CNTNAP3B-213ENST00000617848 XRN1Q8IZH2 1706 aaKnown RBP11.7□□□□□ -0.54
CNTNAP3B-213ENST00000617848 FYB1O15117 783 aa11.7□□□□□ -0.54
CNTNAP3B-213ENST00000617848 CPSF1Q10570 1443 aaKnown RBP11.69□□□□□ -0.54
CNTNAP3B-213ENST00000617848 GGNBP2Q9H3C7 697 aa11.69□□□□□ -0.54
CNTNAP3B-213ENST00000617848 ZBED9Q6R2W3 1325 aa11.68□□□□□ -0.54
CNTNAP3B-213ENST00000617848 PITPNM1O00562 1244 aa11.68□□□□□ -0.54
CNTNAP3B-213ENST00000617848 WDR43Q15061 677 aaKnown RBP eCLIP11.68□□□□□ -0.54
CNTNAP3B-213ENST00000617848 CHD2O14647 1828 aaKnown RBP11.67□□□□□ -0.54
CNTNAP3B-213ENST00000617848 TNNT2P45379 298 aaPredicted RBP11.67□□□□□ -0.54
CNTNAP3B-213ENST00000617848 SSUH2Q9Y2M2 353 aa11.67□□□□□ -0.54
CNTNAP3B-213ENST00000617848 EDC4Q6P2E9 1401 aaKnown RBP11.67□□□□□ -0.54
CNTNAP3B-213ENST00000617848 POLR3AO14802 1390 aaPredicted RBP11.67□□□□□ -0.54
CNTNAP3B-213ENST00000617848 NUTM2FA1L443 756 aa11.66□□□□□ -0.54
CNTNAP3B-213ENST00000617848 HSPA2P54652 639 aa11.66□□□□□ -0.54
CNTNAP3B-213ENST00000617848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.66□□□□□ -0.54
CNTNAP3B-213ENST00000617848 CFAP53Q96M91 514 aa11.66□□□□□ -0.54
CNTNAP3B-213ENST00000617848 CDC42BPGQ6DT37 1551 aa11.66□□□□□ -0.54
CNTNAP3B-213ENST00000617848 ACEP12821 1306 aa11.65□□□□□ -0.54
CNTNAP3B-213ENST00000617848 MTHFSP49914 203 aa11.65□□□□□ -0.54
CNTNAP3B-213ENST00000617848 PROSER2Q86WR7 435 aaPredicted RBP11.65□□□□□ -0.54
CNTNAP3B-213ENST00000617848 ADAMTS8Q9UP79 889 aa11.65□□□□□ -0.54
CNTNAP3B-213ENST00000617848 ANKARQ7Z5J8 1434 aa11.65□□□□□ -0.54
CNTNAP3B-213ENST00000617848 TTC21BQ7Z4L5 1316 aa11.63□□□□□ -0.55
CNTNAP3B-213ENST00000617848 NGDNQ8NEJ9 315 aaKnown RBP11.63□□□□□ -0.55
CNTNAP3B-213ENST00000617848 SPDYE1Q8NFV5 336 aaPredicted RBP11.63□□□□□ -0.55
CNTNAP3B-213ENST00000617848 PMFBP1Q8TBY8 1022 aa11.63□□□□□ -0.55
CNTNAP3B-213ENST00000617848 GTF3C3Q9Y5Q9 886 aa11.63□□□□□ -0.55
CNTNAP3B-213ENST00000617848 C14orf37Q86TY3 774 aa11.62□□□□□ -0.55
CNTNAP3B-213ENST00000617848 NME9Q86XW9 330 aa11.62□□□□□ -0.55
CNTNAP3B-213ENST00000617848 COG3Q96JB2 828 aa11.62□□□□□ -0.55
CNTNAP3B-213ENST00000617848 NWD1Q149M9 1564 aa11.62□□□□□ -0.55
CNTNAP3B-213ENST00000617848 BLMP54132 1417 aaPredicted RBP11.61□□□□□ -0.55
CNTNAP3B-213ENST00000617848 ADGRL3Q9HAR2 1447 aa11.61□□□□□ -0.55
CNTNAP3B-213ENST00000617848 RBM33Q96EV2 1170 aaKnown RBP11.61□□□□□ -0.55
CNTNAP3B-213ENST00000617848 TTC21AQ8NDW8 1320 aa11.6□□□□□ -0.55
CNTNAP3B-213ENST00000617848 USP6P35125 1406 aa11.6□□□□□ -0.55
CNTNAP3B-213ENST00000617848 TOPAZ1Q8N9V7 1692 aa11.6□□□□□ -0.55
CNTNAP3B-213ENST00000617848 PDE3BQ13370 1112 aa11.6□□□□□ -0.55
CNTNAP3B-213ENST00000617848 PHF8Q9UPP1 1060 aa11.6□□□□□ -0.55
CNTNAP3B-213ENST00000617848 NUDCQ9Y266 331 aa11.6□□□□□ -0.55
CNTNAP3B-213ENST00000617848 AKAP12Q02952 1782 aa11.59□□□□□ -0.55
CNTNAP3B-213ENST00000617848 NKTRP30414 1462 aaKnown RBP11.59□□□□□ -0.55
CNTNAP3B-213ENST00000617848 LMTK3Q96Q04 1460 aa11.59□□□□□ -0.55
CNTNAP3B-213ENST00000617848 C19orf44Q9H6X5 657 aa11.59□□□□□ -0.55
CNTNAP3B-213ENST00000617848 ZRANB1Q9UGI0 708 aa11.59□□□□□ -0.55
CNTNAP3B-213ENST00000617848 FMN2Q9NZ56 1722 aa11.59□□□□□ -0.55
CNTNAP3B-213ENST00000617848 SSH2Q76I76 1423 aa11.59□□□□□ -0.55
CNTNAP3B-213ENST00000617848 NCOA3Q9Y6Q9 1424 aa11.59□□□□□ -0.55
CNTNAP3B-213ENST00000617848 KIF20BQ96Q89 1820 aa11.58□□□□□ -0.56
CNTNAP3B-213ENST00000617848 ITSN1Q15811 1721 aa11.58□□□□□ -0.56
CNTNAP3B-213ENST00000617848 MON2Q7Z3U7 1717 aa11.58□□□□□ -0.56
CNTNAP3B-213ENST00000617848 ANKRD26Q9UPS8 1709 aa11.58□□□□□ -0.56
CNTNAP3B-213ENST00000617848 AATKQ6ZMQ8 1374 aa11.58□□□□□ -0.56
CNTNAP3B-213ENST00000617848 POLKQ9UBT6 870 aa11.58□□□□□ -0.56
CNTNAP3B-213ENST00000617848 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
CNTNAP3B-213ENST00000617848 NGEFQ8N5V2 710 aa11.57□□□□□ -0.56
CNTNAP3B-213ENST00000617848 SALL2Q9Y467 1007 aaPredicted RBP11.57□□□□□ -0.56
CNTNAP3B-213ENST00000617848 PNPLA6Q8IY17 1366 aa11.56□□□□□ -0.56
CNTNAP3B-213ENST00000617848 SENP3-EIF4A1A0A087X0R7 540 aa11.56□□□□□ -0.56
CNTNAP3B-213ENST00000617848 DIAPH1O60610 1272 aaKnown RBP11.56□□□□□ -0.56
CNTNAP3B-213ENST00000617848 ESCO1Q5FWF5 840 aa11.56□□□□□ -0.56
CNTNAP3B-213ENST00000617848 CCDC146Q8IYE0 955 aa11.56□□□□□ -0.56
CNTNAP3B-213ENST00000617848 CLEC11AQ9Y240 323 aa11.56□□□□□ -0.56
CNTNAP3B-213ENST00000617848 TMEM94Q12767 1356 aa11.55□□□□□ -0.56
CNTNAP3B-213ENST00000617848 USP31Q70CQ4 1352 aa11.55□□□□□ -0.56
CNTNAP3B-213ENST00000617848 NALCNQ8IZF0 1738 aa11.55□□□□□ -0.56
CNTNAP3B-213ENST00000617848 SMG6Q86US8 1419 aaKnown RBP11.55□□□□□ -0.56
CNTNAP3B-213ENST00000617848 FBLN1P23142 703 aa11.55□□□□□ -0.56
CNTNAP3B-213ENST00000617848 RUNDC1Q96C34 613 aa11.55□□□□□ -0.56
CNTNAP3B-213ENST00000617848 APAF1O14727 1248 aa11.54□□□□□ -0.56
CNTNAP3B-213ENST00000617848 U2AF1L5P0DN76 240 aaPredicted RBP11.54□□□□□ -0.56
CNTNAP3B-213ENST00000617848 ATF3P18847 181 aa11.54□□□□□ -0.56
CNTNAP3B-213ENST00000617848 U2AF1Q01081 240 aaKnown RBP eCLIP11.54□□□□□ -0.56
CNTNAP3B-213ENST00000617848 PSME1Q06323 249 aa11.54□□□□□ -0.56
CNTNAP3B-213ENST00000617848 PNNQ9H307 717 aaKnown RBP11.54□□□□□ -0.56
CNTNAP3B-213ENST00000617848 OVOS2A0A0J9YW53 1432 aa11.53□□□□□ -0.56
CNTNAP3B-213ENST00000617848 OVOS2Q6IE36 1432 aa11.53□□□□□ -0.56
CNTNAP3B-213ENST00000617848 U2SURPO15042 1029 aaKnown RBP11.53□□□□□ -0.56
CNTNAP3B-213ENST00000617848 PPM1GO15355 546 aaPredicted RBP11.53□□□□□ -0.56
CNTNAP3B-213ENST00000617848 FXR2P51116 673 aaKnown RBP eCLIP11.53□□□□□ -0.56
CNTNAP3B-213ENST00000617848 EMILIN1Q9Y6C2 1016 aa11.53□□□□□ -0.56
CNTNAP3B-213ENST00000617848 RGPD8O14715 1765 aaPredicted RBP11.53□□□□□ -0.56
CNTNAP3B-213ENST00000617848 COL3A1P02461 1466 aaPredicted RBP11.52□□□□□ -0.56
CNTNAP3B-213ENST00000617848 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.57
CNTNAP3B-213ENST00000617848 NEFLP07196 543 aa11.52□□□□□ -0.57
CNTNAP3B-213ENST00000617848 NLRP6P59044 892 aa11.52□□□□□ -0.57
CNTNAP3B-213ENST00000617848 RRS1Q15050 365 aaKnown RBP11.52□□□□□ -0.57
CNTNAP3B-213ENST00000617848 ORAI2Q96SN7 254 aa11.52□□□□□ -0.57
CNTNAP3B-213ENST00000617848 SUPT16HQ9Y5B9 1047 aaKnown RBP11.52□□□□□ -0.57
CNTNAP3B-213ENST00000617848 NRKQ7Z2Y5 1582 aa11.52□□□□□ -0.57
CNTNAP3B-213ENST00000617848 CADPS2Q86UW7 1296 aa11.51□□□□□ -0.57
CNTNAP3B-213ENST00000617848 ABTB2Q8N961 1025 aa11.51□□□□□ -0.57
CNTNAP3B-213ENST00000617848 SHPRHQ149N8 1683 aa11.51□□□□□ -0.57
CNTNAP3B-213ENST00000617848 STRCQ7RTU9 1775 aa11.51□□□□□ -0.57
CNTNAP3B-213ENST00000617848 DCCP43146 1447 aa11.51□□□□□ -0.57
CNTNAP3B-213ENST00000617848 C1orf167Q5SNV9 1468 aa11.51□□□□□ -0.57
CNTNAP3B-213ENST00000617848 FCHSD2O94868 740 aa11.5□□□□□ -0.57
CNTNAP3B-213ENST00000617848 IL13P35225 146 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms