RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 IFT172Q9UG01 1749 aa15.16■□□□□ 0.02
RABGAP1-213ENST00000616002 USP32Q8NFA0 1604 aa15.16■□□□□ 0.02
RABGAP1-213ENST00000616002 PIK3C2GO75747 1445 aa15.16■□□□□ 0.02
RABGAP1-213ENST00000616002 GLI3P10071 1580 aa15.16■□□□□ 0.02
RABGAP1-213ENST00000616002 PSME1Q06323 249 aa15.15■□□□□ 0.02
RABGAP1-213ENST00000616002 SF3B2Q13435 895 aaKnown RBP15.15■□□□□ 0.02
RABGAP1-213ENST00000616002 MPHOSPH9Q99550 1183 aa15.15■□□□□ 0.02
RABGAP1-213ENST00000616002 PHF8Q9UPP1 1060 aa15.15■□□□□ 0.02
RABGAP1-213ENST00000616002 PLEKHG5O94827 1062 aa15.14■□□□□ 0.01
RABGAP1-213ENST00000616002 TNS3Q68CZ2 1445 aa15.14■□□□□ 0.01
RABGAP1-213ENST00000616002 CCDC9Q9Y3X0 531 aaKnown RBP15.14■□□□□ 0.01
RABGAP1-213ENST00000616002 LMOD2Q6P5Q4 547 aa15.13■□□□□ 0.01
RABGAP1-213ENST00000616002 SEPT12Q8IYM1 358 aa15.13■□□□□ 0.01
RABGAP1-213ENST00000616002 CABLES1Q8TDN4 633 aa15.13■□□□□ 0.01
RABGAP1-213ENST00000616002 SIRT1Q96EB6 747 aa15.13■□□□□ 0.01
RABGAP1-213ENST00000616002 PODXL2Q9NZ53 605 aa15.13■□□□□ 0.01
RABGAP1-213ENST00000616002 VPS72Q15906 364 aa15.12■□□□□ 0.01
RABGAP1-213ENST00000616002 BRWD3Q6RI45 1802 aa15.12■□□□□ 0.01
RABGAP1-213ENST00000616002 DEFB132Q7Z7B7 95 aa15.11■□□□□ 0.01
RABGAP1-213ENST00000616002 C14orf93Q9H972 538 aaKnown RBP15.11■□□□□ 0.01
RABGAP1-213ENST00000616002 RGPD8O14715 1765 aaPredicted RBP15.11■□□□□ 0.01
RABGAP1-213ENST00000616002 ARHGEF10O15013 1369 aa15.1■□□□□ 0.01
RABGAP1-213ENST00000616002 SAFB2Q14151 953 aaKnown RBP eCLIP15.1■□□□□ 0.01
RABGAP1-213ENST00000616002 SBNO1A3KN83 1393 aa15.1■□□□□ 0.01
RABGAP1-213ENST00000616002 PLCH1Q4KWH8 1693 aa15.09■□□□□ 0.01
RABGAP1-213ENST00000616002 NWD2Q9ULI1 1742 aa15.09■□□□□ 0.01
RABGAP1-213ENST00000616002 KRT27Q7Z3Y8 459 aa15.09■□□□□ 0.01
RABGAP1-213ENST00000616002 PRAM1Q96QH2 718 aa15.09■□□□□ 0.01
RABGAP1-213ENST00000616002 NRXN1Q9ULB1 1477 aa15.09■□□□□ 0.01
RABGAP1-213ENST00000616002 A0A0G2JS52 829 aa15.08■□□□□ 0
RABGAP1-213ENST00000616002 ONECUT3O60422 494 aaPredicted RBP15.08■□□□□ 0
RABGAP1-213ENST00000616002 CFAP70Q5T0N1 1121 aa15.08■□□□□ 0
RABGAP1-213ENST00000616002 POGKQ9P215 609 aa15.07■□□□□ 0
RABGAP1-213ENST00000616002 ABCA3Q99758 1704 aa15.06■□□□□ 0
RABGAP1-213ENST00000616002 FAM83GA6ND36 823 aa15.06■□□□□ 0
RABGAP1-213ENST00000616002 PMFBP1Q8TBY8 1022 aa15.06■□□□□ 0
RABGAP1-213ENST00000616002 ANKARQ7Z5J8 1434 aa15.04■□□□□ -0
RABGAP1-213ENST00000616002 BAG6P46379 1132 aa15.04■□□□□ -0
RABGAP1-213ENST00000616002 PPP4R2Q9NY27 417 aa15.04■□□□□ -0
RABGAP1-213ENST00000616002 GPRASP1Q5JY77 1395 aa15.03■□□□□ -0
RABGAP1-213ENST00000616002 EIF4G2P78344 907 aaKnown RBP eCLIP15.02■□□□□ -0
RABGAP1-213ENST00000616002 FAM98CQ17RN3 349 aaKnown RBP15.02■□□□□ -0
RABGAP1-213ENST00000616002 BTG4Q9NY30 223 aa15.02■□□□□ -0
RABGAP1-213ENST00000616002 DLC1Q96QB1 1528 aa15.02□□□□□ -0.01
RABGAP1-213ENST00000616002 BCL11AQ9H165 835 aa15.02□□□□□ -0.01
RABGAP1-213ENST00000616002 WASHC2AQ641Q2 1341 aa15.01□□□□□ -0.01
RABGAP1-213ENST00000616002 LRP5O75197 1615 aa15.01□□□□□ -0.01
RABGAP1-213ENST00000616002 HIRIP3Q9BW71 556 aaPredicted RBP15.01□□□□□ -0.01
RABGAP1-213ENST00000616002 ADGRB2O60241 1585 aa15.01□□□□□ -0.01
RABGAP1-213ENST00000616002 PSDA5PKW4 1024 aaPredicted RBP15□□□□□ -0.01
RABGAP1-213ENST00000616002 HNRNPUQ00839 825 aaKnown RBP eCLIP15□□□□□ -0.01
RABGAP1-213ENST00000616002 EIF3AQ14152 1382 aaKnown RBP15□□□□□ -0.01
RABGAP1-213ENST00000616002 NRAPQ86VF7 1730 aa14.99□□□□□ -0.01
RABGAP1-213ENST00000616002 ATXN8OSP0DMR3 200 aa14.99□□□□□ -0.01
RABGAP1-213ENST00000616002 TRAK1Q9UPV9 953 aa14.99□□□□□ -0.01
RABGAP1-213ENST00000616002 TRPM3Q9HCF6 1732 aaPredicted RBP14.99□□□□□ -0.01
RABGAP1-213ENST00000616002 MINK1Q8N4C8 1332 aaPredicted RBP14.99□□□□□ -0.01
RABGAP1-213ENST00000616002 COL14A1Q05707 1796 aaKnown RBP14.99□□□□□ -0.01
RABGAP1-213ENST00000616002 HSPA5P11021 654 aaKnown RBP14.98□□□□□ -0.01
RABGAP1-213ENST00000616002 ZBED9Q6R2W3 1325 aa14.98□□□□□ -0.01
RABGAP1-213ENST00000616002 NGDNQ8NEJ9 315 aaKnown RBP14.98□□□□□ -0.01
RABGAP1-213ENST00000616002 ALS2Q96Q42 1657 aa14.97□□□□□ -0.01
RABGAP1-213ENST00000616002 PAK3O75914 559 aaPredicted RBP14.97□□□□□ -0.01
RABGAP1-213ENST00000616002 ADGRB1O14514 1584 aa14.97□□□□□ -0.01
RABGAP1-213ENST00000616002 SPATA31A5Q5VU36 1347 aa14.96□□□□□ -0.01
RABGAP1-213ENST00000616002 SPATA31A7Q8IWB4 1347 aa14.96□□□□□ -0.01
RABGAP1-213ENST00000616002 PRR36Q9H6K5 1346 aa14.96□□□□□ -0.01
RABGAP1-213ENST00000616002 CCDC7Q96M83 1385 aa14.96□□□□□ -0.01
RABGAP1-213ENST00000616002 EN1Q05925 392 aaPredicted RBP14.96□□□□□ -0.01
RABGAP1-213ENST00000616002 FAM182BQ5T319 152 aa14.96□□□□□ -0.01
RABGAP1-213ENST00000616002 PRDM11Q9NQV5 511 aa14.96□□□□□ -0.01
RABGAP1-213ENST00000616002 TULP4Q9NRJ4 1543 aa14.96□□□□□ -0.01
RABGAP1-213ENST00000616002 RGPD1P0DJD0 1748 aa14.95□□□□□ -0.02
RABGAP1-213ENST00000616002 WASLO00401 505 aaPredicted RBP14.95□□□□□ -0.02
RABGAP1-213ENST00000616002 PRKRIP1Q9H875 184 aaPredicted RBP14.94□□□□□ -0.02
RABGAP1-213ENST00000616002 R3HDM1Q15032 1099 aaKnown RBP14.93□□□□□ -0.02
RABGAP1-213ENST00000616002 DCAF11Q8TEB1 546 aa14.93□□□□□ -0.02
RABGAP1-213ENST00000616002 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.93□□□□□ -0.02
RABGAP1-213ENST00000616002 THSD7AQ9UPZ6 1657 aa14.92□□□□□ -0.02
RABGAP1-213ENST00000616002 DISP2A7MBM2 1401 aa14.91□□□□□ -0.02
RABGAP1-213ENST00000616002 CRYBG1Q9Y4K1 1723 aa14.91□□□□□ -0.02
RABGAP1-213ENST00000616002 STAC3Q96MF2 364 aa14.9□□□□□ -0.02
RABGAP1-213ENST00000616002 STRN4Q9NRL3 753 aa14.9□□□□□ -0.02
RABGAP1-213ENST00000616002 SPATA31A1Q5TZJ5 1347 aa14.9□□□□□ -0.02
RABGAP1-213ENST00000616002 KIAA0232Q92628 1395 aa14.9□□□□□ -0.02
RABGAP1-213ENST00000616002 CHRNA2Q15822 529 aa14.9□□□□□ -0.02
RABGAP1-213ENST00000616002 FAM196AQ6ZSG2 479 aa14.9□□□□□ -0.02
RABGAP1-213ENST00000616002 ITSN1Q15811 1721 aa14.89□□□□□ -0.03
RABGAP1-213ENST00000616002 TRIM37O94972 964 aa14.89□□□□□ -0.03
RABGAP1-213ENST00000616002 EZH2Q15910 746 aaKnown RBP14.89□□□□□ -0.03
RABGAP1-213ENST00000616002 NUDT16Q96DE0 195 aaKnown RBP14.89□□□□□ -0.03
RABGAP1-213ENST00000616002 TNS1Q9HBL0 1735 aaKnown RBP14.89□□□□□ -0.03
RABGAP1-213ENST00000616002 SMG6Q86US8 1419 aaKnown RBP14.88□□□□□ -0.03
RABGAP1-213ENST00000616002 ZC3H6P61129 1189 aaKnown RBP14.88□□□□□ -0.03
RABGAP1-213ENST00000616002 PAXIP1Q6ZW49 1069 aaPredicted RBP14.88□□□□□ -0.03
RABGAP1-213ENST00000616002 NUTM2GQ5VZR2 741 aa14.87□□□□□ -0.03
RABGAP1-213ENST00000616002 L3MBTL2Q969R5 705 aa14.87□□□□□ -0.03
RABGAP1-213ENST00000616002 USP35Q9P2H5 1018 aa14.87□□□□□ -0.03
RABGAP1-213ENST00000616002 RNF123Q5XPI4 1314 aa14.87□□□□□ -0.03
RABGAP1-213ENST00000616002 ATP7BP35670 1465 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms