RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 TMEM132EQ6IEE7 984 aa12.78□□□□□ -0.36
TNFAIP3-208ENST00000615468 TRAK1Q9UPV9 953 aa12.78□□□□□ -0.36
TNFAIP3-208ENST00000615468 PREX2Q70Z35 1606 aa12.77□□□□□ -0.36
TNFAIP3-208ENST00000615468 GAS2L2Q8NHY3 880 aa12.77□□□□□ -0.36
TNFAIP3-208ENST00000615468 ZNF830Q96NB3 372 aaPredicted RBP12.77□□□□□ -0.37
TNFAIP3-208ENST00000615468 SHROOM2Q13796 1616 aa12.77□□□□□ -0.37
TNFAIP3-208ENST00000615468 ADGBQ8N7X0 1667 aa12.77□□□□□ -0.37
TNFAIP3-208ENST00000615468 ZBTB22O15209 634 aa12.77□□□□□ -0.37
TNFAIP3-208ENST00000615468 TRMT2AQ8IZ69 625 aaKnown RBP12.77□□□□□ -0.37
TNFAIP3-208ENST00000615468 SNX21Q969T3 373 aa12.77□□□□□ -0.37
TNFAIP3-208ENST00000615468 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.77□□□□□ -0.37
TNFAIP3-208ENST00000615468 KIF3AQ9Y496 699 aa12.77□□□□□ -0.37
TNFAIP3-208ENST00000615468 MCM5P33992 734 aa12.76□□□□□ -0.37
TNFAIP3-208ENST00000615468 WWC1Q8IX03 1113 aa12.76□□□□□ -0.37
TNFAIP3-208ENST00000615468 PDCL2Q8N4E4 241 aa12.76□□□□□ -0.37
TNFAIP3-208ENST00000615468 INSRP06213 1382 aa12.76□□□□□ -0.37
TNFAIP3-208ENST00000615468 CD2BP2O95400 341 aaKnown RBP12.76□□□□□ -0.37
TNFAIP3-208ENST00000615468 HMGN5P82970 282 aaKnown RBP12.76□□□□□ -0.37
TNFAIP3-208ENST00000615468 ATP2B3Q16720 1220 aa12.76□□□□□ -0.37
TNFAIP3-208ENST00000615468 DZIP1LQ8IYY4 767 aaKnown RBP12.75□□□□□ -0.37
TNFAIP3-208ENST00000615468 MYRIPQ8NFW9 859 aa12.75□□□□□ -0.37
TNFAIP3-208ENST00000615468 NINLQ9Y2I6 1382 aa12.75□□□□□ -0.37
TNFAIP3-208ENST00000615468 ZKSCAN2Q63HK3 967 aa12.75□□□□□ -0.37
TNFAIP3-208ENST00000615468 ZNF445P59923 1031 aa12.74□□□□□ -0.37
TNFAIP3-208ENST00000615468 CHAF1AQ13111 956 aaPredicted RBP12.74□□□□□ -0.37
TNFAIP3-208ENST00000615468 MYO5CQ9NQX4 1742 aa12.74□□□□□ -0.37
TNFAIP3-208ENST00000615468 MVPQ14764 893 aaKnown RBP12.74□□□□□ -0.37
TNFAIP3-208ENST00000615468 FOXD4L6Q3SYB3 417 aaPredicted RBP12.74□□□□□ -0.37
TNFAIP3-208ENST00000615468 FOXD4L3Q6VB84 417 aaPredicted RBP12.74□□□□□ -0.37
TNFAIP3-208ENST00000615468 C17orf53Q8N3J3 647 aaPredicted RBP12.74□□□□□ -0.37
TNFAIP3-208ENST00000615468 TESK2Q96S53 571 aa12.74□□□□□ -0.37
TNFAIP3-208ENST00000615468 SMC4Q9NTJ3 1288 aa12.74□□□□□ -0.37
TNFAIP3-208ENST00000615468 UHRF1BP1Q6BDS2 1440 aa12.74□□□□□ -0.37
TNFAIP3-208ENST00000615468 NUCB2P80303 420 aa12.73□□□□□ -0.37
TNFAIP3-208ENST00000615468 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.73□□□□□ -0.37
TNFAIP3-208ENST00000615468 PAXIP1Q6ZW49 1069 aaPredicted RBP12.73□□□□□ -0.37
TNFAIP3-208ENST00000615468 ADGRF5Q8IZF2 1346 aa12.72□□□□□ -0.37
TNFAIP3-208ENST00000615468 DDIT3P35638 169 aa12.72□□□□□ -0.37
TNFAIP3-208ENST00000615468 ESF1Q9H501 851 aaKnown RBP12.72□□□□□ -0.37
TNFAIP3-208ENST00000615468 ERBINQ96RT1 1412 aa12.72□□□□□ -0.37
TNFAIP3-208ENST00000615468 ARHGEF5Q12774 1597 aa12.72□□□□□ -0.37
TNFAIP3-208ENST00000615468 UHRF1BP1LA0JNW5 1464 aa12.72□□□□□ -0.37
TNFAIP3-208ENST00000615468 PLA2R1Q13018 1463 aa12.72□□□□□ -0.37
TNFAIP3-208ENST00000615468 RBM25P49756 843 aaKnown RBP12.72□□□□□ -0.37
TNFAIP3-208ENST00000615468 PDLIM2Q96JY6 352 aa12.72□□□□□ -0.37
TNFAIP3-208ENST00000615468 TMEM51Q9NW97 253 aa12.72□□□□□ -0.37
TNFAIP3-208ENST00000615468 U2AF2P26368 475 aaKnown RBP eCLIP12.72□□□□□ -0.372e-16■■■■□ 24.9
TNFAIP3-208ENST00000615468 ANKRD45Q5TZF3 282 aa12.72□□□□□ -0.37
TNFAIP3-208ENST00000615468 IPO4Q8TEX9 1081 aaKnown RBP12.72□□□□□ -0.37
TNFAIP3-208ENST00000615468 KCNJ4P48050 445 aa12.71□□□□□ -0.37
TNFAIP3-208ENST00000615468 CHMP4AQ9BY43 222 aa12.71□□□□□ -0.37
TNFAIP3-208ENST00000615468 CROCC2H7BZ55 1655 aa12.71□□□□□ -0.37
TNFAIP3-208ENST00000615468 KIF16BQ96L93 1317 aa12.71□□□□□ -0.37
TNFAIP3-208ENST00000615468 DUOX2Q9NRD8 1548 aa12.71□□□□□ -0.37
TNFAIP3-208ENST00000615468 AEBP2Q6ZN18 517 aaPredicted RBP12.71□□□□□ -0.37
TNFAIP3-208ENST00000615468 CHAMP1Q96JM3 812 aa12.71□□□□□ -0.38
TNFAIP3-208ENST00000615468 PRIMPOLQ96LW4 560 aa12.71□□□□□ -0.38
TNFAIP3-208ENST00000615468 TRHP20396 242 aaPredicted RBP12.7□□□□□ -0.38
TNFAIP3-208ENST00000615468 NOLC1Q14978 699 aaKnown RBP eCLIP12.7□□□□□ -0.38
TNFAIP3-208ENST00000615468 TTC12Q9H892 705 aaPredicted RBP12.7□□□□□ -0.38
TNFAIP3-208ENST00000615468 CDCA8Q53HL2 280 aa12.7□□□□□ -0.38
TNFAIP3-208ENST00000615468 TAF3Q5VWG9 929 aa12.7□□□□□ -0.38
TNFAIP3-208ENST00000615468 ZNF710Q8N1W2 664 aa12.7□□□□□ -0.38
TNFAIP3-208ENST00000615468 LMBRD1Q9NUN5 540 aa12.7□□□□□ -0.38
TNFAIP3-208ENST00000615468 FBXO31Q5XUX0 539 aaPredicted RBP12.69□□□□□ -0.38
TNFAIP3-208ENST00000615468 TCP11L2Q8N4U5 519 aa12.69□□□□□ -0.38
TNFAIP3-208ENST00000615468 PKP1Q13835 747 aa12.69□□□□□ -0.38
TNFAIP3-208ENST00000615468 LRSAM1Q6UWE0 723 aa12.69□□□□□ -0.38
TNFAIP3-208ENST00000615468 TAF7LQ5H9L4 462 aa12.69□□□□□ -0.38
TNFAIP3-208ENST00000615468 BCL2L12Q9HB09 334 aa12.69□□□□□ -0.38
TNFAIP3-208ENST00000615468 A2MP01023 1474 aa12.69□□□□□ -0.38
TNFAIP3-208ENST00000615468 ABCC1P33527 1531 aa12.69□□□□□ -0.38
TNFAIP3-208ENST00000615468 CFAP65Q6ZU64 1925 aaKnown RBP12.68□□□□□ -0.38
TNFAIP3-208ENST00000615468 VIRMAQ69YN4 1812 aaKnown RBP12.68□□□□□ -0.38
TNFAIP3-208ENST00000615468 IBTKQ9P2D0 1353 aaPredicted RBP12.68□□□□□ -0.38
TNFAIP3-208ENST00000615468 DDX19BQ9UMR2 479 aa12.68□□□□□ -0.38
TNFAIP3-208ENST00000615468 TSPY26PQ9H489 355 aa12.67□□□□□ -0.38
TNFAIP3-208ENST00000615468 TMEM63CQ9P1W3 806 aa12.67□□□□□ -0.38
TNFAIP3-208ENST00000615468 PRAG1Q86YV5 1406 aa12.67□□□□□ -0.38
TNFAIP3-208ENST00000615468 RTEL1-TNFRSF6BF6WH68 1400 aa12.67□□□□□ -0.38
TNFAIP3-208ENST00000615468 NGEFQ8N5V2 710 aa12.67□□□□□ -0.38
TNFAIP3-208ENST00000615468 USP25Q9UHP3 1055 aa12.66□□□□□ -0.38
TNFAIP3-208ENST00000615468 GPT2Q8TD30 523 aa12.66□□□□□ -0.38
TNFAIP3-208ENST00000615468 TRERF1Q96PN7 1200 aa12.66□□□□□ -0.38
TNFAIP3-208ENST00000615468 UGGT1Q9NYU2 1555 aa12.66□□□□□ -0.38
TNFAIP3-208ENST00000615468 ZMYM3Q14202 1370 aa12.66□□□□□ -0.38
TNFAIP3-208ENST00000615468 TSR2Q969E8 191 aaKnown RBP12.66□□□□□ -0.38
TNFAIP3-208ENST00000615468 CHD1LQ86WJ1 897 aa12.65□□□□□ -0.38
TNFAIP3-208ENST00000615468 NCOA3Q9Y6Q9 1424 aa12.65□□□□□ -0.38
TNFAIP3-208ENST00000615468 ERICH4A6NGS2 130 aa12.65□□□□□ -0.38
TNFAIP3-208ENST00000615468 TBC1D9Q6ZT07 1266 aa12.65□□□□□ -0.38
TNFAIP3-208ENST00000615468 DIAPH3Q9NSV4 1193 aa12.65□□□□□ -0.38
TNFAIP3-208ENST00000615468 ATP7AQ04656 1500 aa12.65□□□□□ -0.38
TNFAIP3-208ENST00000615468 NOL8Q76FK4 1167 aaKnown RBP12.65□□□□□ -0.38
TNFAIP3-208ENST00000615468 COL17A1Q9UMD9 1497 aaPredicted RBP12.65□□□□□ -0.38
TNFAIP3-208ENST00000615468 SYAP1Q96A49 352 aaPredicted RBP12.64□□□□□ -0.39
TNFAIP3-208ENST00000615468 AEBP1Q8IUX7 1158 aa12.63□□□□□ -0.39
TNFAIP3-208ENST00000615468 ZGPATQ8N5A5 531 aaKnown RBP12.63□□□□□ -0.39
TNFAIP3-208ENST00000615468 RUNDC1Q96C34 613 aa12.63□□□□□ -0.39
TNFAIP3-208ENST00000615468 NSFL1CQ9UNZ2 370 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms