RNA–Protein interactions for RNA: ENST00000614259.1

BRCA2-207, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 2

Gene BRCA2, Length 7,950 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-207ENST00000614259 RBL2Q08999 1139 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 TRIM35Q9UPQ4 493 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 ATP6V1AP38606 617 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 EHHADHQ08426 723 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 ALG1LQ6GMV1 187 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 RGL4Q8IZJ4 473 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 SIX5Q8N196 739 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 PRKAB1Q9Y478 270 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 RCCD1A6NED2 376 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 ATMINO43313 823 aaPredicted RBP2.35□□□□□ -2.03
BRCA2-207ENST00000614259 IRF5Q13568 498 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 SRCIN1Q9C0H9 1055 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 NUTM2BA6NNL0 878 aaPredicted RBP2.35□□□□□ -2.03
BRCA2-207ENST00000614259 NUTM2EB1AL46 878 aaPredicted RBP2.35□□□□□ -2.03
BRCA2-207ENST00000614259 NUTM2DQ5VT03 806 aaPredicted RBP2.35□□□□□ -2.03
BRCA2-207ENST00000614259 NUTM2AQ8IVF1 878 aaPredicted RBP2.35□□□□□ -2.03
BRCA2-207ENST00000614259 SOWAHDA6NJG2 315 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 SCAMP3O14828 347 aaKnown RBP2.35□□□□□ -2.03
BRCA2-207ENST00000614259 ACTN4O43707 911 aaKnown RBP2.35□□□□□ -2.03
BRCA2-207ENST00000614259 MSS51Q4VC12 460 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 ZC3H12BQ5HYM0 836 aaKnown RBP2.35□□□□□ -2.03
BRCA2-207ENST00000614259 ZNF669Q96BR6 464 aaPredicted RBP2.35□□□□□ -2.03
BRCA2-207ENST00000614259 GJD4Q96KN9 370 aaPredicted RBP2.35□□□□□ -2.03
BRCA2-207ENST00000614259 PRKD2Q9BZL6 878 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 NOD1Q9Y239 953 aa2.35□□□□□ -2.03
BRCA2-207ENST00000614259 CDCA7LQ96GN5 454 aa2.34□□□□□ -2.03
BRCA2-207ENST00000614259 MS4A3Q96HJ5 214 aa2.34□□□□□ -2.03
BRCA2-207ENST00000614259 TRIM6-TRIM34B2RNG4 842 aa2.34□□□□□ -2.03
BRCA2-207ENST00000614259 FKBP4Q02790 459 aaKnown RBP eCLIP2.34□□□□□ -2.03
BRCA2-207ENST00000614259 FBXO41Q8TF61 875 aa2.34□□□□□ -2.03
BRCA2-207ENST00000614259 DNAJC25Q9H1X3 360 aa2.34□□□□□ -2.03
BRCA2-207ENST00000614259 DCTN4Q9UJW0 460 aa2.34□□□□□ -2.03
BRCA2-207ENST00000614259 AP1G2O75843 785 aa2.34□□□□□ -2.04
BRCA2-207ENST00000614259 PTPRNQ16849 979 aa2.34□□□□□ -2.04
BRCA2-207ENST00000614259 PHTF2Q8N3S3 785 aa2.34□□□□□ -2.04
BRCA2-207ENST00000614259 POTEIP0CG38 1075 aa2.34□□□□□ -2.04
BRCA2-207ENST00000614259 ANKMY2Q8IV38 441 aa2.34□□□□□ -2.04
BRCA2-207ENST00000614259 IVNS1ABPQ9Y6Y0 642 aa2.34□□□□□ -2.04
BRCA2-207ENST00000614259 KANK4Q5T7N3 995 aaPredicted RBP2.34□□□□□ -2.04
BRCA2-207ENST00000614259 TATDN2Q93075 761 aa2.34□□□□□ -2.04
BRCA2-207ENST00000614259 HOXA2O43364 376 aa2.33□□□□□ -2.04
BRCA2-207ENST00000614259 DNAJC14Q6Y2X3 702 aaPredicted RBP2.33□□□□□ -2.04
BRCA2-207ENST00000614259 ICMTO60725 284 aa2.33□□□□□ -2.04
BRCA2-207ENST00000614259 NR1I2O75469 434 aa2.33□□□□□ -2.04
BRCA2-207ENST00000614259 RABGEF1Q9UJ41 708 aa2.33□□□□□ -2.04
BRCA2-207ENST00000614259 TGIF2Q9GZN2 237 aa2.33□□□□□ -2.04
BRCA2-207ENST00000614259 SNRKQ9NRH2 765 aa2.33□□□□□ -2.04
BRCA2-207ENST00000614259 FKBPLQ9UIM3 349 aa2.33□□□□□ -2.04
BRCA2-207ENST00000614259 POTEMA6NI47 508 aa2.33□□□□□ -2.04
BRCA2-207ENST00000614259 RFX1P22670 979 aa2.33□□□□□ -2.04
BRCA2-207ENST00000614259 POTEGQ6S5H5 508 aa2.33□□□□□ -2.04
BRCA2-207ENST00000614259 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.33□□□□□ -2.04
BRCA2-207ENST00000614259 ABL2P42684 1182 aa2.33□□□□□ -2.04
BRCA2-207ENST00000614259 USP4Q13107 963 aa2.33□□□□□ -2.04
BRCA2-207ENST00000614259 IGFBP4P22692 258 aa2.33□□□□□ -2.04
BRCA2-207ENST00000614259 EML3Q32P44 896 aa2.33□□□□□ -2.04
BRCA2-207ENST00000614259 TRERF1Q96PN7 1200 aa2.33□□□□□ -2.04
BRCA2-207ENST00000614259 PTPN12Q05209 780 aaKnown RBP2.32□□□□□ -2.04
BRCA2-207ENST00000614259 NBPF15Q8N660 670 aa2.32□□□□□ -2.04
BRCA2-207ENST00000614259 CCDC163A0A0D9SF12 145 aa2.32□□□□□ -2.04
BRCA2-207ENST00000614259 PWP1Q13610 501 aa2.32□□□□□ -2.04
BRCA2-207ENST00000614259 ABTB2Q8N961 1025 aa2.32□□□□□ -2.04
BRCA2-207ENST00000614259 POLR3EQ9NVU0 708 aa2.32□□□□□ -2.04
BRCA2-207ENST00000614259 TRMT44Q8IYL2 757 aaKnown RBP2.32□□□□□ -2.04
BRCA2-207ENST00000614259 TMA7Q9Y2S6 64 aaKnown RBP2.32□□□□□ -2.04
BRCA2-207ENST00000614259 EIF3JO75822 258 aaKnown RBP2.32□□□□□ -2.04
BRCA2-207ENST00000614259 ATP2B2Q01814 1243 aa2.32□□□□□ -2.04
BRCA2-207ENST00000614259 ESCO1Q5FWF5 840 aa2.32□□□□□ -2.04
BRCA2-207ENST00000614259 ATP1B4Q9UN42 357 aaPredicted RBP2.32□□□□□ -2.04
BRCA2-207ENST00000614259 ROBO2Q9HCK4 1378 aa2.32□□□□□ -2.04
BRCA2-207ENST00000614259 SEC24BO95487 1268 aa2.32□□□□□ -2.04
BRCA2-207ENST00000614259 LMOD1P29536 600 aaPredicted RBP2.32□□□□□ -2.04
BRCA2-207ENST00000614259 SEC13P55735 322 aa2.32□□□□□ -2.04
BRCA2-207ENST00000614259 NFE2L2Q16236 605 aa2.32□□□□□ -2.04
BRCA2-207ENST00000614259 REPIN1Q9BWE0 567 aaKnown RBP2.32□□□□□ -2.04
BRCA2-207ENST00000614259 MYT1LQ9UL68 1186 aa2.32□□□□□ -2.04
BRCA2-207ENST00000614259 ST13P50502 369 aaKnown RBP2.32□□□□□ -2.04
BRCA2-207ENST00000614259 PADI6Q6TGC4 694 aa2.32□□□□□ -2.04
BRCA2-207ENST00000614259 TRIM34Q9BYJ4 488 aa2.32□□□□□ -2.04
BRCA2-207ENST00000614259 NBPF3Q9H094 633 aa2.32□□□□□ -2.04
BRCA2-207ENST00000614259 FAM98CQ17RN3 349 aaKnown RBP2.31□□□□□ -2.04
BRCA2-207ENST00000614259 PMEPA1Q969W9 287 aa2.31□□□□□ -2.04
BRCA2-207ENST00000614259 JUNDP17535 347 aa2.31□□□□□ -2.04
BRCA2-207ENST00000614259 HNRNPUQ00839 825 aaKnown RBP eCLIP2.31□□□□□ -2.04
BRCA2-207ENST00000614259 SEC16BQ96JE7 1060 aa2.31□□□□□ -2.04
BRCA2-207ENST00000614259 PPP4R2Q9NY27 417 aa2.31□□□□□ -2.04
BRCA2-207ENST00000614259 CCAR1Q8IX12 1150 aaKnown RBP2.31□□□□□ -2.04
BRCA2-207ENST00000614259 STK11IPQ8N1F8 1099 aa2.31□□□□□ -2.04
BRCA2-207ENST00000614259 PRPF40AO75400 957 aaKnown RBP2.31□□□□□ -2.04
BRCA2-207ENST00000614259 PCSK2P16519 638 aa2.31□□□□□ -2.04
BRCA2-207ENST00000614259 IBSPP21815 317 aaPredicted RBP2.31□□□□□ -2.04
BRCA2-207ENST00000614259 HIRAP54198 1017 aaPredicted RBP2.31□□□□□ -2.04
BRCA2-207ENST00000614259 DHX9Q08211 1270 aaKnown RBP2.31□□□□□ -2.04
BRCA2-207ENST00000614259 SLFNL1Q499Z3 407 aa2.31□□□□□ -2.04
BRCA2-207ENST00000614259 C1orf53Q5VUE5 145 aa2.31□□□□□ -2.04
BRCA2-207ENST00000614259 CHADLQ6NUI6 762 aa2.31□□□□□ -2.04
BRCA2-207ENST00000614259 FBXO33Q7Z6M2 555 aa2.31□□□□□ -2.04
BRCA2-207ENST00000614259 NPAS4Q8IUM7 802 aa2.31□□□□□ -2.04
BRCA2-207ENST00000614259 GDPD2Q9HCC8 539 aa2.31□□□□□ -2.04
BRCA2-207ENST00000614259 C21orf2O43822 256 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms