RNA–Protein interactions for RNA: ENST00000614256.4

CHTOP-207, Transcript of chromatin target of PRMT1, humanhuman

TSL 3 BASIC

Gene CHTOP, Length 1,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-207ENST00000614256 NME9Q86XW9 330 aa25.45■■□□□ 1.66
CHTOP-207ENST00000614256 PIK3C2AO00443 1686 aa25.44■■□□□ 1.66
CHTOP-207ENST00000614256 CCDC184Q52MB2 194 aa25.44■■□□□ 1.66
CHTOP-207ENST00000614256 SLAIN2Q9P270 581 aa25.44■■□□□ 1.66
CHTOP-207ENST00000614256 FOXO3O43524 673 aa25.43■■□□□ 1.66
CHTOP-207ENST00000614256 ZRANB1Q9UGI0 708 aa25.43■■□□□ 1.66
CHTOP-207ENST00000614256 TRPM3Q9HCF6 1732 aaPredicted RBP25.43■■□□□ 1.66
CHTOP-207ENST00000614256 MYBBP1AQ9BQG0 1328 aaKnown RBP25.42■■□□□ 1.66
CHTOP-207ENST00000614256 CCER2I3L3R5 266 aa25.42■■□□□ 1.66
CHTOP-207ENST00000614256 MARF1Q9Y4F3 1742 aaKnown RBP25.41■■□□□ 1.66
CHTOP-207ENST00000614256 XPCQ01831 940 aaPredicted RBP25.4■■□□□ 1.66
CHTOP-207ENST00000614256 BRINP3Q76B58 766 aa25.4■■□□□ 1.66
CHTOP-207ENST00000614256 MORC1Q86VD1 984 aa25.4■■□□□ 1.66
CHTOP-207ENST00000614256 DDX17Q92841 729 aaKnown RBP25.4■■□□□ 1.66
CHTOP-207ENST00000614256 PSME1Q06323 249 aa25.39■■□□□ 1.65
CHTOP-207ENST00000614256 PPP2R1AP30153 589 aa25.37■■□□□ 1.65
CHTOP-207ENST00000614256 TNNT2P45379 298 aaPredicted RBP25.37■■□□□ 1.65
CHTOP-207ENST00000614256 TTC21AQ8NDW8 1320 aa25.37■■□□□ 1.65
CHTOP-207ENST00000614256 USP54Q70EL1 1684 aa25.36■■□□□ 1.65
CHTOP-207ENST00000614256 OVOS2A0A0J9YW53 1432 aa25.35■■□□□ 1.65
CHTOP-207ENST00000614256 OVOS2Q6IE36 1432 aa25.35■■□□□ 1.65
CHTOP-207ENST00000614256 MAP2P11137 1827 aaKnown RBP25.34■■□□□ 1.65
CHTOP-207ENST00000614256 ROBO1Q9Y6N7 1651 aa25.34■■□□□ 1.65
CHTOP-207ENST00000614256 PAK3O75914 559 aaPredicted RBP25.34■■□□□ 1.65
CHTOP-207ENST00000614256 KRT28Q7Z3Y7 464 aa25.34■■□□□ 1.65
CHTOP-207ENST00000614256 BRD4O60885 1362 aaPredicted RBP25.34■■□□□ 1.65
CHTOP-207ENST00000614256 NHSL1Q5SYE7 1610 aa25.34■■□□□ 1.65
CHTOP-207ENST00000614256 ALS2Q96Q42 1657 aa25.33■■□□□ 1.65
CHTOP-207ENST00000614256 PXDNQ92626 1479 aa25.33■■□□□ 1.65
CHTOP-207ENST00000614256 NLRP13Q86W25 1043 aa25.33■■□□□ 1.64
CHTOP-207ENST00000614256 MRS2Q9HD23 443 aa25.32■■□□□ 1.64
CHTOP-207ENST00000614256 COG3Q96JB2 828 aa25.31■■□□□ 1.64
CHTOP-207ENST00000614256 FBLN1P23142 703 aa25.3■■□□□ 1.64
CHTOP-207ENST00000614256 NUTM2GQ5VZR2 741 aa25.3■■□□□ 1.64
CHTOP-207ENST00000614256 NPHP3Q7Z494 1330 aa25.3■■□□□ 1.64
CHTOP-207ENST00000614256 USP31Q70CQ4 1352 aa25.3■■□□□ 1.64
CHTOP-207ENST00000614256 ABTB2Q8N961 1025 aa25.29■■□□□ 1.64
CHTOP-207ENST00000614256 NLRP6P59044 892 aa25.27■■□□□ 1.64
CHTOP-207ENST00000614256 IQSEC2Q5JU85 1478 aa25.26■■□□□ 1.63
CHTOP-207ENST00000614256 SCAF1Q9H7N4 1312 aaKnown RBP25.25■■□□□ 1.63
CHTOP-207ENST00000614256 SBNO1A3KN83 1393 aa25.24■■□□□ 1.63
CHTOP-207ENST00000614256 MTHFSP49914 203 aa25.23■■□□□ 1.63
CHTOP-207ENST00000614256 CERKQ8TCT0 537 aa25.23■■□□□ 1.63
CHTOP-207ENST00000614256 SOS2Q07890 1332 aaPredicted RBP25.23■■□□□ 1.63
CHTOP-207ENST00000614256 TNS3Q68CZ2 1445 aa25.22■■□□□ 1.63
CHTOP-207ENST00000614256 LMOD2Q6P5Q4 547 aa25.21■■□□□ 1.63
CHTOP-207ENST00000614256 AATKQ6ZMQ8 1374 aa25.21■■□□□ 1.63
CHTOP-207ENST00000614256 SOX12O15370 315 aa25.21■■□□□ 1.63
CHTOP-207ENST00000614256 AHDC1Q5TGY3 1603 aaPredicted RBP25.2■■□□□ 1.63
CHTOP-207ENST00000614256 TOM1O60784 492 aa25.2■■□□□ 1.62
CHTOP-207ENST00000614256 POLKQ9UBT6 870 aa25.2■■□□□ 1.62
CHTOP-207ENST00000614256 CRYBG1Q9Y4K1 1723 aa25.2■■□□□ 1.62
CHTOP-207ENST00000614256 SPATA31A3Q5VYP0 1347 aa25.2■■□□□ 1.62
CHTOP-207ENST00000614256 MED1Q15648 1581 aaPredicted RBP25.2■■□□□ 1.62
CHTOP-207ENST00000614256 PEAK1Q9H792 1746 aa25.19■■□□□ 1.62
CHTOP-207ENST00000614256 SHPRHQ149N8 1683 aa25.19■■□□□ 1.62
CHTOP-207ENST00000614256 UBAP1LF5GYI3 381 aa25.19■■□□□ 1.62
CHTOP-207ENST00000614256 RRS1Q15050 365 aaKnown RBP25.19■■□□□ 1.62
CHTOP-207ENST00000614256 EMILIN1Q9Y6C2 1016 aa25.19■■□□□ 1.62
CHTOP-207ENST00000614256 LTN1O94822 1766 aa25.18■■□□□ 1.62
CHTOP-207ENST00000614256 SLIT3O75094 1523 aa25.18■■□□□ 1.62
CHTOP-207ENST00000614256 SMG6Q86US8 1419 aaKnown RBP25.18■■□□□ 1.62
CHTOP-207ENST00000614256 PNISRQ8TF01 805 aaKnown RBP25.18■■□□□ 1.62
CHTOP-207ENST00000614256 NFAT5O94916 1531 aa25.17■■□□□ 1.62
CHTOP-207ENST00000614256 PIP4K2BP78356 416 aa25.17■■□□□ 1.62
CHTOP-207ENST00000614256 PHRF1Q9P1Y6 1649 aaKnown RBP25.17■■□□□ 1.62
CHTOP-207ENST00000614256 PLEKHG5O94827 1062 aa25.16■■□□□ 1.62
CHTOP-207ENST00000614256 FAM9BQ8IZU0 186 aa25.16■■□□□ 1.62
CHTOP-207ENST00000614256 COL3A1P02461 1466 aaPredicted RBP25.16■■□□□ 1.62
CHTOP-207ENST00000614256 PHLPP1O60346 1717 aa25.16■■□□□ 1.62
CHTOP-207ENST00000614256 USP19O94966 1318 aa25.16■■□□□ 1.62
CHTOP-207ENST00000614256 PPM1GO15355 546 aaPredicted RBP25.13■■□□□ 1.61
CHTOP-207ENST00000614256 ARHGEF10O15013 1369 aa25.12■■□□□ 1.61
CHTOP-207ENST00000614256 PNPLA6Q8IY17 1366 aa25.12■■□□□ 1.61
CHTOP-207ENST00000614256 CDK12Q9NYV4 1490 aaPredicted RBP25.12■■□□□ 1.61
CHTOP-207ENST00000614256 COL16A1Q07092 1604 aaPredicted RBP25.12■■□□□ 1.61
CHTOP-207ENST00000614256 ABCA3Q99758 1704 aa25.12■■□□□ 1.61
CHTOP-207ENST00000614256 MAP3K19Q56UN5 1328 aa25.12■■□□□ 1.61
CHTOP-207ENST00000614256 YTHDC1Q96MU7 727 aaKnown RBP25.11■■□□□ 1.61
CHTOP-207ENST00000614256 CABLES1Q8TDN4 633 aa25.09■■□□□ 1.61
CHTOP-207ENST00000614256 GCP02774 474 aa25.09■■□□□ 1.61
CHTOP-207ENST00000614256 CFAP53Q96M91 514 aa25.09■■□□□ 1.61
CHTOP-207ENST00000614256 INSRP06213 1382 aa25.08■■□□□ 1.61
CHTOP-207ENST00000614256 KCNH5Q8NCM2 988 aa25.07■■□□□ 1.6
CHTOP-207ENST00000614256 ADAMTS8Q9UP79 889 aa25.05■■□□□ 1.6
CHTOP-207ENST00000614256 RGPD5Q99666 1765 aa25.04■■□□□ 1.6
CHTOP-207ENST00000614256 COL22A1Q8NFW1 1626 aaPredicted RBP25.03■■□□□ 1.6
CHTOP-207ENST00000614256 HSP90AB2PQ58FF8 381 aa25.03■■□□□ 1.6
CHTOP-207ENST00000614256 LRRC59Q96AG4 307 aaKnown RBP25.03■■□□□ 1.6
CHTOP-207ENST00000614256 FLT4P35916 1363 aa25.03■■□□□ 1.6
CHTOP-207ENST00000614256 WDR43Q15061 677 aaKnown RBP eCLIP25.02■■□□□ 1.67e-6■■■■■ 27.3
CHTOP-207ENST00000614256 DIAPH1O60610 1272 aaKnown RBP25.01■■□□□ 1.59
CHTOP-207ENST00000614256 AMPHP49418 695 aa25.01■■□□□ 1.59
CHTOP-207ENST00000614256 ARHGEF25Q86VW2 580 aa25.01■■□□□ 1.59
CHTOP-207ENST00000614256 HOXC9P31274 260 aa25■■□□□ 1.59
CHTOP-207ENST00000614256 ZC3H6P61129 1189 aaKnown RBP25■■□□□ 1.59
CHTOP-207ENST00000614256 COL18A1P39060 1754 aa25■■□□□ 1.59
CHTOP-207ENST00000614256 ZBTB7CA1YPR0 619 aa25■■□□□ 1.59
CHTOP-207ENST00000614256 KIF24Q5T7B8 1368 aa24.99■■□□□ 1.59
CHTOP-207ENST00000614256 IL13P35225 146 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms