RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 CLSPNQ9HAW4 1339 aa17.98■□□□□ 0.47
CSTF1-208ENST00000613138 ARHGEF10O15013 1369 aa17.97■□□□□ 0.47
CSTF1-208ENST00000613138 QTRT2Q9H974 415 aaKnown RBP17.97■□□□□ 0.47
CSTF1-208ENST00000613138 PHRF1Q9P1Y6 1649 aaKnown RBP17.97■□□□□ 0.47
CSTF1-208ENST00000613138 HAP1P54257 671 aaPredicted RBP17.96■□□□□ 0.47
CSTF1-208ENST00000613138 USP21Q9UK80 565 aa17.96■□□□□ 0.47
CSTF1-208ENST00000613138 BCL9LQ86UU0 1499 aa17.95■□□□□ 0.46
CSTF1-208ENST00000613138 TESK2Q96S53 571 aa17.95■□□□□ 0.46
CSTF1-208ENST00000613138 SBNO2Q9Y2G9 1366 aa17.94■□□□□ 0.46
CSTF1-208ENST00000613138 FNBP4Q8N3X1 1017 aaPredicted RBP17.94■□□□□ 0.46
CSTF1-208ENST00000613138 USP47Q96K76 1375 aa17.93■□□□□ 0.46
CSTF1-208ENST00000613138 SLIT2O94813 1529 aa17.93■□□□□ 0.46
CSTF1-208ENST00000613138 ATRNO75882 1429 aa17.92■□□□□ 0.46
CSTF1-208ENST00000613138 USP6P35125 1406 aa17.92■□□□□ 0.46
CSTF1-208ENST00000613138 FAM83GA6ND36 823 aa17.92■□□□□ 0.46
CSTF1-208ENST00000613138 RXRBP28702 533 aa17.92■□□□□ 0.46
CSTF1-208ENST00000613138 PIK3C2AO00443 1686 aa17.92■□□□□ 0.46
CSTF1-208ENST00000613138 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.92■□□□□ 0.46
CSTF1-208ENST00000613138 MON2Q7Z3U7 1717 aa17.91■□□□□ 0.46
CSTF1-208ENST00000613138 NRKQ7Z2Y5 1582 aa17.91■□□□□ 0.46
CSTF1-208ENST00000613138 RGS12O14924 1447 aa17.9■□□□□ 0.46
CSTF1-208ENST00000613138 CD163L1Q9NR16 1453 aa17.9■□□□□ 0.46
CSTF1-208ENST00000613138 NRAPQ86VF7 1730 aa17.9■□□□□ 0.46
CSTF1-208ENST00000613138 ABTB2Q8N961 1025 aa17.9■□□□□ 0.46
CSTF1-208ENST00000613138 SSH2Q76I76 1423 aa17.89■□□□□ 0.46
CSTF1-208ENST00000613138 CHRNA2Q15822 529 aa17.89■□□□□ 0.45
CSTF1-208ENST00000613138 SLC12A5Q9H2X9 1139 aa17.89■□□□□ 0.45
CSTF1-208ENST00000613138 ATAD2Q6PL18 1390 aa17.89■□□□□ 0.45
CSTF1-208ENST00000613138 NWD2Q9ULI1 1742 aa17.89■□□□□ 0.45
CSTF1-208ENST00000613138 GLI3P10071 1580 aa17.88■□□□□ 0.45
CSTF1-208ENST00000613138 ZC3H6P61129 1189 aaKnown RBP17.88■□□□□ 0.45
CSTF1-208ENST00000613138 TMC1Q8TDI8 760 aa17.88■□□□□ 0.45
CSTF1-208ENST00000613138 TIMELESSQ9UNS1 1208 aa17.88■□□□□ 0.45
CSTF1-208ENST00000613138 CPSF1Q10570 1443 aaKnown RBP17.88■□□□□ 0.45
CSTF1-208ENST00000613138 COL14A1Q05707 1796 aaKnown RBP17.87■□□□□ 0.45
CSTF1-208ENST00000613138 RBM6P78332 1123 aaKnown RBP17.87■□□□□ 0.45
CSTF1-208ENST00000613138 ZRANB1Q9UGI0 708 aa17.87■□□□□ 0.45
CSTF1-208ENST00000613138 TRPC5Q9UL62 973 aaPredicted RBP17.87■□□□□ 0.45
CSTF1-208ENST00000613138 KIAA0232Q92628 1395 aa17.87■□□□□ 0.45
CSTF1-208ENST00000613138 UNC5CLQ8IV45 518 aa17.86■□□□□ 0.45
CSTF1-208ENST00000613138 USP19O94966 1318 aa17.85■□□□□ 0.45
CSTF1-208ENST00000613138 TTC21BQ7Z4L5 1316 aa17.85■□□□□ 0.45
CSTF1-208ENST00000613138 KTN1Q86UP2 1357 aaKnown RBP17.85■□□□□ 0.45
CSTF1-208ENST00000613138 BRWD3Q6RI45 1802 aa17.84■□□□□ 0.45
CSTF1-208ENST00000613138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.84■□□□□ 0.45
CSTF1-208ENST00000613138 BTG4Q9NY30 223 aa17.84■□□□□ 0.45
CSTF1-208ENST00000613138 NLRP6P59044 892 aa17.83■□□□□ 0.44
CSTF1-208ENST00000613138 PRDM11Q9NQV5 511 aa17.83■□□□□ 0.44
CSTF1-208ENST00000613138 CDK12Q9NYV4 1490 aaPredicted RBP17.82■□□□□ 0.44
CSTF1-208ENST00000613138 A0A1W2PP64 1363 aa17.82■□□□□ 0.44
CSTF1-208ENST00000613138 RGPD5Q99666 1765 aa17.82■□□□□ 0.44
CSTF1-208ENST00000613138 ZBTB7CA1YPR0 619 aa17.82■□□□□ 0.44
CSTF1-208ENST00000613138 SOX12O15370 315 aa17.82■□□□□ 0.44
CSTF1-208ENST00000613138 GJD4Q96KN9 370 aaPredicted RBP17.82■□□□□ 0.44
CSTF1-208ENST00000613138 MYOM1P52179 1685 aa17.81■□□□□ 0.44
CSTF1-208ENST00000613138 NME9Q86XW9 330 aa17.81■□□□□ 0.44
CSTF1-208ENST00000613138 SLIT3O75094 1523 aa17.81■□□□□ 0.44
CSTF1-208ENST00000613138 GCP02774 474 aa17.8■□□□□ 0.44
CSTF1-208ENST00000613138 NLRP13Q86W25 1043 aa17.8■□□□□ 0.44
CSTF1-208ENST00000613138 CCDC9Q9Y3X0 531 aaKnown RBP17.8■□□□□ 0.44
CSTF1-208ENST00000613138 LMO7Q8WWI1 1683 aa17.8■□□□□ 0.44
CSTF1-208ENST00000613138 CAMTA1Q9Y6Y1 1673 aa17.8■□□□□ 0.44
CSTF1-208ENST00000613138 VPS72Q15906 364 aa17.79■□□□□ 0.44
CSTF1-208ENST00000613138 ZNF692Q9BU19 519 aaPredicted RBP17.79■□□□□ 0.44
CSTF1-208ENST00000613138 COL18A1P39060 1754 aa17.79■□□□□ 0.44
CSTF1-208ENST00000613138 HSPA5P11021 654 aaKnown RBP17.78■□□□□ 0.44
CSTF1-208ENST00000613138 STRN4Q9NRL3 753 aa17.78■□□□□ 0.44
CSTF1-208ENST00000613138 BRD4O60885 1362 aaPredicted RBP17.78■□□□□ 0.44
CSTF1-208ENST00000613138 TMF1P82094 1093 aa17.77■□□□□ 0.44
CSTF1-208ENST00000613138 HDGFL2Q7Z4V5 671 aaPredicted RBP17.76■□□□□ 0.43
CSTF1-208ENST00000613138 NFAT5O94916 1531 aa17.76■□□□□ 0.43
CSTF1-208ENST00000613138 TTC21AQ8NDW8 1320 aa17.75■□□□□ 0.43
CSTF1-208ENST00000613138 EP400Q96L91 3159 aa17.75■□□□□ 0.43
CSTF1-208ENST00000613138 USP54Q70EL1 1684 aa17.75■□□□□ 0.43
CSTF1-208ENST00000613138 PUS7Q96PZ0 661 aaKnown RBP17.75■□□□□ 0.43
CSTF1-208ENST00000613138 CPDO75976 1380 aa17.75■□□□□ 0.43
CSTF1-208ENST00000613138 EDC4Q6P2E9 1401 aaKnown RBP17.74■□□□□ 0.43
CSTF1-208ENST00000613138 UPF1Q92900 1129 aaKnown RBP eCLIP17.74■□□□□ 0.43
CSTF1-208ENST00000613138 LTN1O94822 1766 aa17.74■□□□□ 0.43
CSTF1-208ENST00000613138 FAM98CQ17RN3 349 aaKnown RBP17.73■□□□□ 0.43
CSTF1-208ENST00000613138 SEPT12Q8IYM1 358 aa17.73■□□□□ 0.43
CSTF1-208ENST00000613138 POLR3GLQ9BT43 218 aa17.73■□□□□ 0.43
CSTF1-208ENST00000613138 TERF2IPQ9NYB0 399 aa17.73■□□□□ 0.43
CSTF1-208ENST00000613138 SPATA31A5Q5VU36 1347 aa17.72■□□□□ 0.43
CSTF1-208ENST00000613138 SPATA31A7Q8IWB4 1347 aa17.72■□□□□ 0.43
CSTF1-208ENST00000613138 FBLN1P23142 703 aa17.72■□□□□ 0.43
CSTF1-208ENST00000613138 LARP1Q6PKG0 1096 aaKnown RBP17.72■□□□□ 0.43
CSTF1-208ENST00000613138 USP35Q9P2H5 1018 aa17.72■□□□□ 0.43
CSTF1-208ENST00000613138 AXIN2Q9Y2T1 843 aa17.72■□□□□ 0.43
CSTF1-208ENST00000613138 C11orf95C9JLR9 678 aaPredicted RBP17.71■□□□□ 0.43
CSTF1-208ENST00000613138 EIF4G2P78344 907 aaKnown RBP eCLIP17.71■□□□□ 0.43
CSTF1-208ENST00000613138 COL5A2P05997 1499 aaPredicted RBP17.7■□□□□ 0.42
CSTF1-208ENST00000613138 USP31Q70CQ4 1352 aa17.7■□□□□ 0.42
CSTF1-208ENST00000613138 ANKRD36BQ8N2N9 1353 aa17.7■□□□□ 0.42
CSTF1-208ENST00000613138 OVOS2A0A0J9YW53 1432 aa17.7■□□□□ 0.42
CSTF1-208ENST00000613138 OVOS2Q6IE36 1432 aa17.7■□□□□ 0.42
CSTF1-208ENST00000613138 KIF20BQ96Q89 1820 aa17.7■□□□□ 0.42
CSTF1-208ENST00000613138 NINLQ9Y2I6 1382 aa17.69■□□□□ 0.42
CSTF1-208ENST00000613138 THSD7AQ9UPZ6 1657 aa17.69■□□□□ 0.42
CSTF1-208ENST00000613138 A0A0G2JS52 829 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms