RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 TTC21BQ7Z4L5 1316 aa19.89■□□□□ 0.77
CIT-219ENST00000612548 DCCP43146 1447 aa19.89■□□□□ 0.77
CIT-219ENST00000612548 ESCO1Q5FWF5 840 aa19.88■□□□□ 0.77
CIT-219ENST00000612548 SSH2Q76I76 1423 aa19.87■□□□□ 0.77
CIT-219ENST00000612548 MSH6P52701 1360 aa19.87■□□□□ 0.77
CIT-219ENST00000612548 ATF3P18847 181 aa19.87■□□□□ 0.77
CIT-219ENST00000612548 C1orf167Q5SNV9 1468 aa19.86■□□□□ 0.77
CIT-219ENST00000612548 ZRANB1Q9UGI0 708 aa19.86■□□□□ 0.77
CIT-219ENST00000612548 CENPBP07199 599 aaPredicted RBP19.85■□□□□ 0.77
CIT-219ENST00000612548 ORAI2Q96SN7 254 aa19.85■□□□□ 0.77
CIT-219ENST00000612548 MST1RQ04912 1400 aa19.85■□□□□ 0.77
CIT-219ENST00000612548 COG3Q96JB2 828 aa19.84■□□□□ 0.77
CIT-219ENST00000612548 HNRNPUQ00839 825 aaKnown RBP eCLIP19.83■□□□□ 0.77
CIT-219ENST00000612548 TTC21AQ8NDW8 1320 aa19.83■□□□□ 0.77
CIT-219ENST00000612548 KIF1AQ12756 1690 aa19.83■□□□□ 0.76
CIT-219ENST00000612548 MTHFSP49914 203 aa19.83■□□□□ 0.76
CIT-219ENST00000612548 CADPS2Q86UW7 1296 aa19.83■□□□□ 0.76
CIT-219ENST00000612548 PIK3C2AO00443 1686 aa19.82■□□□□ 0.76
CIT-219ENST00000612548 OVOS2A0A0J9YW53 1432 aa19.81■□□□□ 0.76
CIT-219ENST00000612548 OVOS2Q6IE36 1432 aa19.81■□□□□ 0.76
CIT-219ENST00000612548 MAP2P11137 1827 aaKnown RBP19.79■□□□□ 0.76
CIT-219ENST00000612548 SCAF1Q9H7N4 1312 aaKnown RBP19.79■□□□□ 0.76
CIT-219ENST00000612548 PAK3O75914 559 aaPredicted RBP19.78■□□□□ 0.76
CIT-219ENST00000612548 FBLN1P23142 703 aa19.78■□□□□ 0.76
CIT-219ENST00000612548 PSME1Q06323 249 aa19.78■□□□□ 0.76
CIT-219ENST00000612548 WDR43Q15061 677 aaKnown RBP eCLIP19.78■□□□□ 0.76
CIT-219ENST00000612548 SHPRHQ149N8 1683 aa19.78■□□□□ 0.76
CIT-219ENST00000612548 FOXO3O43524 673 aa19.78■□□□□ 0.76
CIT-219ENST00000612548 CFAP53Q96M91 514 aa19.78■□□□□ 0.76
CIT-219ENST00000612548 XPCQ01831 940 aaPredicted RBP19.75■□□□□ 0.75
CIT-219ENST00000612548 ADAMTS8Q9UP79 889 aa19.75■□□□□ 0.75
CIT-219ENST00000612548 MARF1Q9Y4F3 1742 aaKnown RBP19.75■□□□□ 0.75
CIT-219ENST00000612548 AATKQ6ZMQ8 1374 aa19.75■□□□□ 0.75
CIT-219ENST00000612548 USP31Q70CQ4 1352 aa19.75■□□□□ 0.75
CIT-219ENST00000612548 USP54Q70EL1 1684 aa19.74■□□□□ 0.75
CIT-219ENST00000612548 ABTB2Q8N961 1025 aa19.74■□□□□ 0.75
CIT-219ENST00000612548 POLKQ9UBT6 870 aa19.74■□□□□ 0.75
CIT-219ENST00000612548 BLMP54132 1417 aaPredicted RBP19.74■□□□□ 0.75
CIT-219ENST00000612548 TRPM3Q9HCF6 1732 aaPredicted RBP19.73■□□□□ 0.75
CIT-219ENST00000612548 COL3A1P02461 1466 aaPredicted RBP19.73■□□□□ 0.75
CIT-219ENST00000612548 NLRP6P59044 892 aa19.73■□□□□ 0.75
CIT-219ENST00000612548 NUTM2GQ5VZR2 741 aa19.73■□□□□ 0.75
CIT-219ENST00000612548 LTBP4Q8N2S1 1624 aa19.73■□□□□ 0.75
CIT-219ENST00000612548 PPM1GO15355 546 aaPredicted RBP19.72■□□□□ 0.75
CIT-219ENST00000612548 EMILIN1Q9Y6C2 1016 aa19.72■□□□□ 0.75
CIT-219ENST00000612548 INSRP06213 1382 aa19.72■□□□□ 0.75
CIT-219ENST00000612548 SMG6Q86US8 1419 aaKnown RBP19.72■□□□□ 0.75
CIT-219ENST00000612548 SENP3-EIF4A1A0A087X0R7 540 aa19.72■□□□□ 0.75
CIT-219ENST00000612548 SOX12O15370 315 aa19.72■□□□□ 0.75
CIT-219ENST00000612548 RRS1Q15050 365 aaKnown RBP19.72■□□□□ 0.75
CIT-219ENST00000612548 AEBP2Q6ZN18 517 aaPredicted RBP19.71■□□□□ 0.75
CIT-219ENST00000612548 KRT28Q7Z3Y7 464 aa19.71■□□□□ 0.75
CIT-219ENST00000612548 DDX17Q92841 729 aaKnown RBP19.7■□□□□ 0.74
CIT-219ENST00000612548 CDK12Q9NYV4 1490 aaPredicted RBP19.7■□□□□ 0.74
CIT-219ENST00000612548 ZBED9Q6R2W3 1325 aa19.69■□□□□ 0.74
CIT-219ENST00000612548 PNPLA6Q8IY17 1366 aa19.69■□□□□ 0.74
CIT-219ENST00000612548 SLAIN2Q9P270 581 aa19.69■□□□□ 0.74
CIT-219ENST00000612548 BRINP3Q76B58 766 aa19.68■□□□□ 0.74
CIT-219ENST00000612548 NPHP3Q7Z494 1330 aa19.68■□□□□ 0.74
CIT-219ENST00000612548 PEAK1Q9H792 1746 aa19.67■□□□□ 0.74
CIT-219ENST00000612548 LMOD2Q6P5Q4 547 aa19.66■□□□□ 0.74
CIT-219ENST00000612548 CCDC146Q8IYE0 955 aa19.66■□□□□ 0.74
CIT-219ENST00000612548 ALS2Q96Q42 1657 aa19.66■□□□□ 0.74
CIT-219ENST00000612548 DIAPH1O60610 1272 aaKnown RBP19.65■□□□□ 0.74
CIT-219ENST00000612548 NUDCQ9Y266 331 aa19.65■□□□□ 0.74
CIT-219ENST00000612548 U2SURPO15042 1029 aaKnown RBP19.65■□□□□ 0.74
CIT-219ENST00000612548 PXDNQ92626 1479 aa19.65■□□□□ 0.74
CIT-219ENST00000612548 U2AF1L5P0DN76 240 aaPredicted RBP19.64■□□□□ 0.73
CIT-219ENST00000612548 U2AF1Q01081 240 aaKnown RBP eCLIP19.64■□□□□ 0.73
CIT-219ENST00000612548 MAP3K19Q56UN5 1328 aa19.64■□□□□ 0.73
CIT-219ENST00000612548 SALL2Q9Y467 1007 aaPredicted RBP19.62■□□□□ 0.73
CIT-219ENST00000612548 SBNO1A3KN83 1393 aa19.62■□□□□ 0.73
CIT-219ENST00000612548 NFAT5O94916 1531 aa19.61■□□□□ 0.73
CIT-219ENST00000612548 PLEKHG5O94827 1062 aa19.61■□□□□ 0.73
CIT-219ENST00000612548 TNS3Q68CZ2 1445 aa19.61■□□□□ 0.73
CIT-219ENST00000612548 LTN1O94822 1766 aa19.61■□□□□ 0.73
CIT-219ENST00000612548 SLIT3O75094 1523 aa19.6■□□□□ 0.73
CIT-219ENST00000612548 NHSL1Q5SYE7 1610 aa19.59■□□□□ 0.73
CIT-219ENST00000612548 FLT4P35916 1363 aa19.59■□□□□ 0.73
CIT-219ENST00000612548 IL13P35225 146 aa19.59■□□□□ 0.73
CIT-219ENST00000612548 AMPHP49418 695 aa19.59■□□□□ 0.73
CIT-219ENST00000612548 USP19O94966 1318 aa19.58■□□□□ 0.73
CIT-219ENST00000612548 HSP90AB2PQ58FF8 381 aa19.58■□□□□ 0.73
CIT-219ENST00000612548 KCNH5Q8NCM2 988 aa19.57■□□□□ 0.72
CIT-219ENST00000612548 SPATA31A3Q5VYP0 1347 aa19.57■□□□□ 0.72
CIT-219ENST00000612548 MED1Q15648 1581 aaPredicted RBP19.57■□□□□ 0.72
CIT-219ENST00000612548 APAF1O14727 1248 aa19.57■□□□□ 0.72
CIT-219ENST00000612548 ROBO1Q9Y6N7 1651 aa19.56■□□□□ 0.72
CIT-219ENST00000612548 EIF4A2Q14240 407 aaKnown RBP19.56■□□□□ 0.72
CIT-219ENST00000612548 RUNDC1Q96C34 613 aa19.56■□□□□ 0.72
CIT-219ENST00000612548 SOS2Q07890 1332 aaPredicted RBP19.55■□□□□ 0.72
CIT-219ENST00000612548 GCP02774 474 aa19.55■□□□□ 0.72
CIT-219ENST00000612548 PHRF1Q9P1Y6 1649 aaKnown RBP19.55■□□□□ 0.72
CIT-219ENST00000612548 KIF24Q5T7B8 1368 aa19.55■□□□□ 0.72
CIT-219ENST00000612548 IQSEC2Q5JU85 1478 aa19.55■□□□□ 0.72
CIT-219ENST00000612548 ARHGEF10O15013 1369 aa19.54■□□□□ 0.72
CIT-219ENST00000612548 ZBTB7CA1YPR0 619 aa19.54■□□□□ 0.72
CIT-219ENST00000612548 HOXC9P31274 260 aa19.54■□□□□ 0.72
CIT-219ENST00000612548 RTL1A6NKG5 1358 aa19.54■□□□□ 0.72
CIT-219ENST00000612548 HMOX1P09601 288 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms