RNA–Protein interactions for RNA: ENST00000611829.4

LINC00635-223, long intergenic non-protein coding RNA 635, human

TSL 5

Gene LINC00635, Length 290 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00635-223	ENST00000611829	IRF5	Q13568	498 aa		9.45	□□□□□ -0.9
LINC00635-223	ENST00000611829	DOK7	Q18PE1	504 aa		9.45	□□□□□ -0.9
LINC00635-223	ENST00000611829	KCNH8	Q96L42	1107 aa		9.45	□□□□□ -0.9
LINC00635-223	ENST00000611829	HFM1	A2PYH4	1435 aa		9.45	□□□□□ -0.9
LINC00635-223	ENST00000611829	USP17L8	P0C7I0	530 aa		9.44	□□□□□ -0.9
LINC00635-223	ENST00000611829	RDH13	Q8NBN7	331 aa		9.44	□□□□□ -0.9
LINC00635-223	ENST00000611829	GLMN	Q92990	594 aa		9.44	□□□□□ -0.9
LINC00635-223	ENST00000611829	TMEM134	Q9H6X4	195 aa		9.44	□□□□□ -0.9
LINC00635-223	ENST00000611829	AKNA	Q7Z591	1439 aa		9.44	□□□□□ -0.9
LINC00635-223	ENST00000611829	MAGI3	Q5TCQ9	1506 aa		9.44	□□□□□ -0.9
LINC00635-223	ENST00000611829	GPATCH8	Q9UKJ3	1502 aa	Known RBP	9.44	□□□□□ -0.9
LINC00635-223	ENST00000611829	PTPN23	Q9H3S7	1636 aa		9.44	□□□□□ -0.9
LINC00635-223	ENST00000611829	POTEJ	P0CG39	1038 aa		9.43	□□□□□ -0.9
LINC00635-223	ENST00000611829	WWC1	Q8IX03	1113 aa		9.43	□□□□□ -0.9
LINC00635-223	ENST00000611829	BCL2L12	Q9HB09	334 aa		9.43	□□□□□ -0.9
LINC00635-223	ENST00000611829	CHIC2	Q9UKJ5	165 aa		9.43	□□□□□ -0.9
LINC00635-223	ENST00000611829	KIF14	Q15058	1648 aa		9.42	□□□□□ -0.9
LINC00635-223	ENST00000611829	KDM5B	Q9UGL1	1544 aa		9.42	□□□□□ -0.9
LINC00635-223	ENST00000611829	DHX57	Q6P158	1386 aa	Known RBP	9.42	□□□□□ -0.9
LINC00635-223	ENST00000611829	ANKRD30A	Q9BXX3	1397 aa		9.42	□□□□□ -0.9
LINC00635-223	ENST00000611829	PPP4R3B	Q5MIZ7	849 aa		9.42	□□□□□ -0.9
LINC00635-223	ENST00000611829	PLEKHH2	Q8IVE3	1493 aa		9.41	□□□□□ -0.9
LINC00635-223	ENST00000611829	TRIM6-TRIM34	B2RNG4	842 aa		9.41	□□□□□ -0.9
LINC00635-223	ENST00000611829	NBPF26	B4DH59	902 aa		9.41	□□□□□ -0.9
LINC00635-223	ENST00000611829	PPP1R3G	B7ZBB8	358 aa		9.41	□□□□□ -0.9
LINC00635-223	ENST00000611829	HLA-C	Q95604	372 aa		9.41	□□□□□ -0.9
LINC00635-223	ENST00000611829	TRIM52	Q96A61	297 aa		9.41	□□□□□ -0.9
LINC00635-223	ENST00000611829	PRM3	Q9NNZ6	103 aa		9.41	□□□□□ -0.9
LINC00635-223	ENST00000611829	RRP7BP	Q9NSQ0	103 aa		9.41	□□□□□ -0.9
LINC00635-223	ENST00000611829	ZNF644	Q9H582	1327 aa	Predicted RBP	9.4	□□□□□ -0.9
LINC00635-223	ENST00000611829	KDM4A	O75164	1064 aa		9.4	□□□□□ -0.9
LINC00635-223	ENST00000611829	PTPRE	P23469	700 aa		9.4	□□□□□ -0.9
LINC00635-223	ENST00000611829	GJA5	P36382	358 aa		9.4	□□□□□ -0.9
LINC00635-223	ENST00000611829	GUCA2A	Q02747	115 aa		9.4	□□□□□ -0.9
LINC00635-223	ENST00000611829	PROX2	Q3B8N5	592 aa		9.4	□□□□□ -0.9
LINC00635-223	ENST00000611829	HDGFL1	Q5TGJ6	251 aa		9.4	□□□□□ -0.9
LINC00635-223	ENST00000611829	PACS2	Q86VP3	889 aa		9.4	□□□□□ -0.9
LINC00635-223	ENST00000611829	GJD4	Q96KN9	370 aa	Predicted RBP	9.4	□□□□□ -0.9
LINC00635-223	ENST00000611829	DAPK1	P53355	1430 aa		9.39	□□□□□ -0.91
LINC00635-223	ENST00000611829	NAIP	Q13075	1403 aa		9.39	□□□□□ -0.91
LINC00635-223	ENST00000611829	LRRIQ1	Q96JM4	1722 aa		9.39	□□□□□ -0.91
LINC00635-223	ENST00000611829	RIMBP2	O15034	1052 aa		9.39	□□□□□ -0.91
LINC00635-223	ENST00000611829	ADAMTS19	Q8TE59	1207 aa		9.39	□□□□□ -0.91
LINC00635-223	ENST00000611829	PCDHGC3	Q9UN70	934 aa		9.39	□□□□□ -0.91
LINC00635-223	ENST00000611829	ABCC10	Q5T3U5	1492 aa		9.39	□□□□□ -0.91
LINC00635-223	ENST00000611829	ABCC5	O15440	1437 aa		9.39	□□□□□ -0.91
LINC00635-223	ENST00000611829	KIAA1107	Q9UPP5	1409 aa		9.39	□□□□□ -0.91
LINC00635-223	ENST00000611829	ADCY10	Q96PN6	1610 aa		9.38	□□□□□ -0.91
LINC00635-223	ENST00000611829	RFX1	P22670	979 aa		9.38	□□□□□ -0.91
LINC00635-223	ENST00000611829	CTDSPL2	Q05D32	466 aa		9.38	□□□□□ -0.91
LINC00635-223	ENST00000611829	ZSWIM6	Q9HCJ5	1215 aa		9.38	□□□□□ -0.91
LINC00635-223	ENST00000611829	HMX1	Q9NP08	348 aa	Predicted RBP	9.38	□□□□□ -0.91
LINC00635-223	ENST00000611829	ITSN2	Q9NZM3	1697 aa		9.38	□□□□□ -0.91
LINC00635-223	ENST00000611829	ERCC6L2	Q5T890	1561 aa		9.37	□□□□□ -0.91
LINC00635-223	ENST00000611829	PPP1R15A	O75807	674 aa	Predicted RBP	9.37	□□□□□ -0.91
LINC00635-223	ENST00000611829	FDX1	P10109	184 aa		9.37	□□□□□ -0.91
LINC00635-223	ENST00000611829	GZF1	Q9H116	711 aa	Predicted RBP	9.37	□□□□□ -0.91
LINC00635-223	ENST00000611829	ZBTB3	Q9H5J0	574 aa		9.37	□□□□□ -0.91
LINC00635-223	ENST00000611829	PLCH2	O75038	1416 aa		9.37	□□□□□ -0.91
LINC00635-223	ENST00000611829	PTPRK	Q15262	1439 aa		9.37	□□□□□ -0.91
LINC00635-223	ENST00000611829	CAMSAP2	Q08AD1	1489 aa		9.36	□□□□□ -0.91
LINC00635-223	ENST00000611829	SOCS7	O14512	581 aa		9.36	□□□□□ -0.91
LINC00635-223	ENST00000611829	HOXA2	O43364	376 aa		9.36	□□□□□ -0.91
LINC00635-223	ENST00000611829	GCGR	P47871	477 aa		9.36	□□□□□ -0.91
LINC00635-223	ENST00000611829	HNRNPM	P52272	730 aa	Known RBP eCLIP	9.36	□□□□□ -0.91
LINC00635-223	ENST00000611829	PRPF38B	Q5VTL8	546 aa	Known RBP	9.36	□□□□□ -0.91
LINC00635-223	ENST00000611829	WDR7	Q9Y4E6	1490 aa		9.35	□□□□□ -0.91
LINC00635-223	ENST00000611829	SLC10A3	P09131	477 aa		9.35	□□□□□ -0.91
LINC00635-223	ENST00000611829	NCOA1	Q15788	1441 aa		9.35	□□□□□ -0.91
LINC00635-223	ENST00000611829	MPHOSPH9	Q99550	1183 aa		9.35	□□□□□ -0.91
LINC00635-223	ENST00000611829	NDUFB9	Q9Y6M9	179 aa		9.35	□□□□□ -0.91
LINC00635-223	ENST00000611829	SHANK2	Q9UPX8	1470 aa		9.34	□□□□□ -0.91
LINC00635-223	ENST00000611829	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	9.34	□□□□□ -0.91
LINC00635-223	ENST00000611829	GPR37L1	O60883	481 aa		9.34	□□□□□ -0.91
LINC00635-223	ENST00000611829	CYB5RL	Q6IPT4	315 aa		9.34	□□□□□ -0.91
LINC00635-223	ENST00000611829	LRRN4	Q8WUT4	740 aa		9.34	□□□□□ -0.91
LINC00635-223	ENST00000611829	TSC1	Q92574	1164 aa		9.34	□□□□□ -0.91
LINC00635-223	ENST00000611829	KCNK17	Q96T54	332 aa		9.34	□□□□□ -0.91
LINC00635-223	ENST00000611829	TRIM34	Q9BYJ4	488 aa		9.34	□□□□□ -0.91
LINC00635-223	ENST00000611829	ARHGAP5	Q13017	1502 aa		9.34	□□□□□ -0.91
LINC00635-223	ENST00000611829	CARNS1	A5YM72	827 aa		9.33	□□□□□ -0.92
LINC00635-223	ENST00000611829	POTEB2	H3BUK9	544 aa		9.33	□□□□□ -0.92
LINC00635-223	ENST00000611829	VAC14	Q08AM6	782 aa		9.33	□□□□□ -0.92
LINC00635-223	ENST00000611829	KIAA1468	Q9P260	1216 aa		9.33	□□□□□ -0.92
LINC00635-223	ENST00000611829	C9orf84	Q5VXU9	1444 aa		9.32	□□□□□ -0.92
LINC00635-223	ENST00000611829	ASXL2	Q76L83	1435 aa		9.32	□□□□□ -0.92
LINC00635-223	ENST00000611829	ARAP3	Q8WWN8	1544 aa		9.32	□□□□□ -0.92
LINC00635-223	ENST00000611829	PSD	A5PKW4	1024 aa	Predicted RBP	9.32	□□□□□ -0.92
LINC00635-223	ENST00000611829	USP46	P62068	366 aa		9.32	□□□□□ -0.92
LINC00635-223	ENST00000611829	NEUROD1	Q13562	356 aa		9.32	□□□□□ -0.92
LINC00635-223	ENST00000611829	SWT1	Q5T5J6	900 aa	Known RBP	9.32	□□□□□ -0.92
LINC00635-223	ENST00000611829	EPS8L1	Q8TE68	723 aa		9.32	□□□□□ -0.92
LINC00635-223	ENST00000611829	ADGRL2	O95490	1459 aa		9.32	□□□□□ -0.92
LINC00635-223	ENST00000611829	CCDC141	Q6ZP82	1450 aa		9.32	□□□□□ -0.92
LINC00635-223	ENST00000611829	ANKRD50	Q9ULJ7	1429 aa		9.31	□□□□□ -0.92
LINC00635-223	ENST00000611829	DNMT1	P26358	1616 aa	Known RBP	9.31	□□□□□ -0.92
LINC00635-223	ENST00000611829	CFAP70	Q5T0N1	1121 aa		9.31	□□□□□ -0.92
LINC00635-223	ENST00000611829	ZCCHC11	Q5TAX3	1644 aa	Known RBP	9.31	□□□□□ -0.92
LINC00635-223	ENST00000611829	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	9.31	□□□□□ -0.92
LINC00635-223	ENST00000611829	SPAG9	O60271	1321 aa	Known RBP	9.31	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms