RNA–Protein interactions for RNA: ENST00000610289.2

PRAMEF28P-201, Transcript of PRAME family member 28, pseudogene, humanhuman

BASIC

Gene PRAMEF28P, Length 1,450 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF28P-201ENST00000610289 STAC3Q96MF2 364 aa15.8■□□□□ 0.12
PRAMEF28P-201ENST00000610289 TULP4Q9NRJ4 1543 aa15.79■□□□□ 0.12
PRAMEF28P-201ENST00000610289 SPATA31A5Q5VU36 1347 aa15.79■□□□□ 0.12
PRAMEF28P-201ENST00000610289 SPATA31A7Q8IWB4 1347 aa15.79■□□□□ 0.12
PRAMEF28P-201ENST00000610289 FAM182BQ5T319 152 aa15.78■□□□□ 0.12
PRAMEF28P-201ENST00000610289 ALS2Q96Q42 1657 aa15.78■□□□□ 0.12
PRAMEF28P-201ENST00000610289 NUDT16Q96DE0 195 aaKnown RBP15.78■□□□□ 0.12
PRAMEF28P-201ENST00000610289 NRAPQ86VF7 1730 aa15.77■□□□□ 0.11
PRAMEF28P-201ENST00000610289 BAG6P46379 1132 aa15.77■□□□□ 0.11
PRAMEF28P-201ENST00000610289 PRDM11Q9NQV5 511 aa15.77■□□□□ 0.11
PRAMEF28P-201ENST00000610289 PSDA5PKW4 1024 aaPredicted RBP15.76■□□□□ 0.11
PRAMEF28P-201ENST00000610289 COL14A1Q05707 1796 aaKnown RBP15.75■□□□□ 0.11
PRAMEF28P-201ENST00000610289 HRCP23327 699 aa15.75■□□□□ 0.11
PRAMEF28P-201ENST00000610289 EN1Q05925 392 aaPredicted RBP15.75■□□□□ 0.11
PRAMEF28P-201ENST00000610289 CHRNA2Q15822 529 aa15.75■□□□□ 0.11
PRAMEF28P-201ENST00000610289 CDK19Q9BWU1 502 aa15.75■□□□□ 0.11
PRAMEF28P-201ENST00000610289 KIAA0232Q92628 1395 aa15.74■□□□□ 0.11
PRAMEF28P-201ENST00000610289 NUTM2GQ5VZR2 741 aa15.73■□□□□ 0.11
PRAMEF28P-201ENST00000610289 ATP7BP35670 1465 aa15.73■□□□□ 0.11
PRAMEF28P-201ENST00000610289 ZC3H6P61129 1189 aaKnown RBP15.72■□□□□ 0.11
PRAMEF28P-201ENST00000610289 SPATA31A1Q5TZJ5 1347 aa15.72■□□□□ 0.11
PRAMEF28P-201ENST00000610289 NBPF8Q3BBV2 869 aa15.71■□□□□ 0.11
PRAMEF28P-201ENST00000610289 STRN4Q9NRL3 753 aa15.71■□□□□ 0.11
PRAMEF28P-201ENST00000610289 CCDC61Q9Y6R9 512 aa15.71■□□□□ 0.1
PRAMEF28P-201ENST00000610289 CRYBG1Q9Y4K1 1723 aa15.7■□□□□ 0.1
PRAMEF28P-201ENST00000610289 ACEP12821 1306 aa15.7■□□□□ 0.1
PRAMEF28P-201ENST00000610289 PLEKHG3A1L390 1219 aa15.7■□□□□ 0.1
PRAMEF28P-201ENST00000610289 POLR3AO14802 1390 aaPredicted RBP15.69■□□□□ 0.1
PRAMEF28P-201ENST00000610289 ARHGEF28Q8N1W1 1705 aaKnown RBP15.69■□□□□ 0.1
PRAMEF28P-201ENST00000610289 THSD7AQ9UPZ6 1657 aa15.69■□□□□ 0.1
PRAMEF28P-201ENST00000610289 EZH2Q15910 746 aaKnown RBP15.68■□□□□ 0.1
PRAMEF28P-201ENST00000610289 NBPF1Q3BBV0 1214 aa15.68■□□□□ 0.1
PRAMEF28P-201ENST00000610289 USP35Q9P2H5 1018 aa15.68■□□□□ 0.1
PRAMEF28P-201ENST00000610289 TRIM37O94972 964 aa15.67■□□□□ 0.1
PRAMEF28P-201ENST00000610289 EVA1CP58658 441 aa15.67■□□□□ 0.1
PRAMEF28P-201ENST00000610289 R3HDM1Q15032 1099 aaKnown RBP15.67■□□□□ 0.1
PRAMEF28P-201ENST00000610289 FAM196AQ6ZSG2 479 aa15.67■□□□□ 0.1
PRAMEF28P-201ENST00000610289 ABTB2Q8N961 1025 aa15.67■□□□□ 0.1
PRAMEF28P-201ENST00000610289 LRP5O75197 1615 aa15.67■□□□□ 0.1
PRAMEF28P-201ENST00000610289 CAMKK2Q96RR4 588 aa15.66■□□□□ 0.1
PRAMEF28P-201ENST00000610289 DISP2A7MBM2 1401 aa15.66■□□□□ 0.1
PRAMEF28P-201ENST00000610289 LARP1Q6PKG0 1096 aaKnown RBP15.65■□□□□ 0.1
PRAMEF28P-201ENST00000610289 BARGINQ6ZT62 677 aa15.65■□□□□ 0.1
PRAMEF28P-201ENST00000610289 ITSN1Q15811 1721 aa15.65■□□□□ 0.1
PRAMEF28P-201ENST00000610289 RGPD1P0DJD0 1748 aa15.64■□□□□ 0.09
PRAMEF28P-201ENST00000610289 SSH2Q76I76 1423 aa15.64■□□□□ 0.09
PRAMEF28P-201ENST00000610289 APBA3O96018 575 aa15.64■□□□□ 0.09
PRAMEF28P-201ENST00000610289 CAMTA1Q9Y6Y1 1673 aa15.63■□□□□ 0.09
PRAMEF28P-201ENST00000610289 PHRF1Q9P1Y6 1649 aaKnown RBP15.63■□□□□ 0.09
PRAMEF28P-201ENST00000610289 USP19O94966 1318 aa15.63■□□□□ 0.09
PRAMEF28P-201ENST00000610289 PDE3BQ13370 1112 aa15.63■□□□□ 0.09
PRAMEF28P-201ENST00000610289 CPDO75976 1380 aa15.62■□□□□ 0.09
PRAMEF28P-201ENST00000610289 GCP02774 474 aa15.62■□□□□ 0.09
PRAMEF28P-201ENST00000610289 SRPK2P78362 688 aaKnown RBP15.62■□□□□ 0.09
PRAMEF28P-201ENST00000610289 TCP11L2Q8N4U5 519 aa15.62■□□□□ 0.09
PRAMEF28P-201ENST00000610289 CABP2Q9NPB3 220 aa15.62■□□□□ 0.09
PRAMEF28P-201ENST00000610289 TOPAZ1Q8N9V7 1692 aa15.61■□□□□ 0.09
PRAMEF28P-201ENST00000610289 NLRP13Q86W25 1043 aa15.61■□□□□ 0.09
PRAMEF28P-201ENST00000610289 TNS1Q9HBL0 1735 aaKnown RBP15.61■□□□□ 0.09
PRAMEF28P-201ENST00000610289 CENPJQ9HC77 1338 aaPredicted RBP15.6■□□□□ 0.09
PRAMEF28P-201ENST00000610289 PPIP5K1Q6PFW1 1433 aa15.6■□□□□ 0.09
PRAMEF28P-201ENST00000610289 NRKQ7Z2Y5 1582 aa15.59■□□□□ 0.09
PRAMEF28P-201ENST00000610289 KIAA1210Q9ULL0 1709 aa15.59■□□□□ 0.09
PRAMEF28P-201ENST00000610289 CABP1Q9NZU7 370 aa15.59■□□□□ 0.09
PRAMEF28P-201ENST00000610289 THRAP3Q9Y2W1 955 aaKnown RBP15.59■□□□□ 0.09
PRAMEF28P-201ENST00000610289 PARD3Q8TEW0 1356 aa15.58■□□□□ 0.08
PRAMEF28P-201ENST00000610289 LMO7Q8WWI1 1683 aa15.57■□□□□ 0.08
PRAMEF28P-201ENST00000610289 NLRP6P59044 892 aa15.56■□□□□ 0.08
PRAMEF28P-201ENST00000610289 BRD4O60885 1362 aaPredicted RBP15.55■□□□□ 0.08
PRAMEF28P-201ENST00000610289 COL5A2P05997 1499 aaPredicted RBP15.55■□□□□ 0.08
PRAMEF28P-201ENST00000610289 ZBTB7CA1YPR0 619 aa15.54■□□□□ 0.08
PRAMEF28P-201ENST00000610289 L3MBTL2Q969R5 705 aa15.54■□□□□ 0.08
PRAMEF28P-201ENST00000610289 USP6P35125 1406 aa15.54■□□□□ 0.08
PRAMEF28P-201ENST00000610289 AATKQ6ZMQ8 1374 aa15.53■□□□□ 0.08
PRAMEF28P-201ENST00000610289 NBPF14Q5TI25 921 aa15.53■□□□□ 0.08
PRAMEF28P-201ENST00000610289 CRB1P82279 1406 aa15.53■□□□□ 0.08
PRAMEF28P-201ENST00000610289 AXIN2Q9Y2T1 843 aa15.52■□□□□ 0.07
PRAMEF28P-201ENST00000610289 C11orf95C9JLR9 678 aaPredicted RBP15.5■□□□□ 0.07
PRAMEF28P-201ENST00000610289 TOM1L2Q6ZVM7 507 aa15.5■□□□□ 0.07
PRAMEF28P-201ENST00000610289 EVC2Q86UK5 1308 aa15.5■□□□□ 0.07
PRAMEF28P-201ENST00000610289 DDB1Q16531 1140 aa15.49■□□□□ 0.07
PRAMEF28P-201ENST00000610289 PTF1AQ7RTS3 328 aa15.49■□□□□ 0.07
PRAMEF28P-201ENST00000610289 SIN3AQ96ST3 1273 aa15.49■□□□□ 0.07
PRAMEF28P-201ENST00000610289 SLIT3O75094 1523 aa15.49■□□□□ 0.07
PRAMEF28P-201ENST00000610289 RREB1Q92766 1687 aa15.48■□□□□ 0.07
PRAMEF28P-201ENST00000610289 QRICH2Q9H0J4 1663 aa15.48■□□□□ 0.07
PRAMEF28P-201ENST00000610289 PARP4Q9UKK3 1724 aaKnown RBP15.48■□□□□ 0.07
PRAMEF28P-201ENST00000610289 OVOS2A0A0G2JMS6 1433 aa15.48■□□□□ 0.07
PRAMEF28P-201ENST00000610289 OVOS2A0A0J9YW53 1432 aa15.48■□□□□ 0.07
PRAMEF28P-201ENST00000610289 OVOS2Q6IE36 1432 aa15.48■□□□□ 0.07
PRAMEF28P-201ENST00000610289 NUP188Q5SRE5 1749 aa15.47■□□□□ 0.07
PRAMEF28P-201ENST00000610289 PLSCR1O15162 318 aa15.47■□□□□ 0.07
PRAMEF28P-201ENST00000610289 ARHGEF25Q86VW2 580 aa15.47■□□□□ 0.07
PRAMEF28P-201ENST00000610289 ZNF692Q9BU19 519 aaPredicted RBP15.47■□□□□ 0.07
PRAMEF28P-201ENST00000610289 TTC21BQ7Z4L5 1316 aa15.47■□□□□ 0.07
PRAMEF28P-201ENST00000610289 WDR17Q8IZU2 1322 aa15.47■□□□□ 0.07
PRAMEF28P-201ENST00000610289 MARCH10Q8NA82 808 aaPredicted RBP15.46■□□□□ 0.07
PRAMEF28P-201ENST00000610289 BCL11BQ9C0K0 894 aaPredicted RBP15.46■□□□□ 0.07
PRAMEF28P-201ENST00000610289 SPON1Q9HCB6 807 aa15.46■□□□□ 0.07
PRAMEF28P-201ENST00000610289 SOX12O15370 315 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms