RNA–Protein interactions for RNA: ENST00000610088.5

LINC01278-206, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 4 BASIC

Gene LINC01278, Length 554 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-206ENST00000610088 COL14A1Q05707 1796 aaKnown RBP19.15■□□□□ 0.66
LINC01278-206ENST00000610088 ZBTB7AO95365 584 aa19.15■□□□□ 0.66
LINC01278-206ENST00000610088 USP35Q9P2H5 1018 aa19.15■□□□□ 0.66
LINC01278-206ENST00000610088 SPATA31A1Q5TZJ5 1347 aa19.15■□□□□ 0.66
LINC01278-206ENST00000610088 RPGRIP1LQ68CZ1 1315 aa19.15■□□□□ 0.66
LINC01278-206ENST00000610088 PMFBP1Q8TBY8 1022 aa19.14■□□□□ 0.65
LINC01278-206ENST00000610088 STRN4Q9NRL3 753 aa19.14■□□□□ 0.65
LINC01278-206ENST00000610088 PPLO60437 1756 aa19.14■□□□□ 0.65
LINC01278-206ENST00000610088 PRDM11Q9NQV5 511 aa19.13■□□□□ 0.65
LINC01278-206ENST00000610088 TMEM132EQ6IEE7 984 aa19.12■□□□□ 0.65
LINC01278-206ENST00000610088 ATF5Q9Y2D1 282 aaPredicted RBP19.12■□□□□ 0.65
LINC01278-206ENST00000610088 NRXN1Q9ULB1 1477 aa19.11■□□□□ 0.65
LINC01278-206ENST00000610088 FHDC1Q9C0D6 1143 aaPredicted RBP19.11■□□□□ 0.65
LINC01278-206ENST00000610088 PDGFDQ9GZP0 370 aaPredicted RBP19.11■□□□□ 0.65
LINC01278-206ENST00000610088 TECPR2O15040 1411 aa19.1■□□□□ 0.65
LINC01278-206ENST00000610088 MPHOSPH9Q99550 1183 aa19.1■□□□□ 0.65
LINC01278-206ENST00000610088 SYT17Q9BSW7 474 aa19.1■□□□□ 0.65
LINC01278-206ENST00000610088 RGPD8O14715 1765 aaPredicted RBP19.09■□□□□ 0.65
LINC01278-206ENST00000610088 ANO8Q9HCE9 1232 aaPredicted RBP19.08■□□□□ 0.64
LINC01278-206ENST00000610088 MYOM1P52179 1685 aa19.08■□□□□ 0.64
LINC01278-206ENST00000610088 ABCC11Q96J66 1382 aa19.07■□□□□ 0.64
LINC01278-206ENST00000610088 ADGRF5Q8IZF2 1346 aa19.07■□□□□ 0.64
LINC01278-206ENST00000610088 PTGER2P43116 358 aa19.07■□□□□ 0.64
LINC01278-206ENST00000610088 CHRNA2Q15822 529 aa19.07■□□□□ 0.64
LINC01278-206ENST00000610088 CHD4Q14839 1912 aa19.07■□□□□ 0.64
LINC01278-206ENST00000610088 BCL11BQ9C0K0 894 aaPredicted RBP19.05■□□□□ 0.64
LINC01278-206ENST00000610088 EVA1CP58658 441 aa19.04■□□□□ 0.64
LINC01278-206ENST00000610088 SAFB2Q14151 953 aaKnown RBP eCLIP19.04■□□□□ 0.64
LINC01278-206ENST00000610088 RGL3Q3MIN7 710 aa19.04■□□□□ 0.64
LINC01278-206ENST00000610088 IFT172Q9UG01 1749 aa19.03■□□□□ 0.64
LINC01278-206ENST00000610088 PAK3O75914 559 aaPredicted RBP19.03■□□□□ 0.64
LINC01278-206ENST00000610088 GPRASP1Q5JY77 1395 aa19.03■□□□□ 0.64
LINC01278-206ENST00000610088 CASZ1Q86V15 1759 aa19.02■□□□□ 0.64
LINC01278-206ENST00000610088 BARGINQ6ZT62 677 aa19.02■□□□□ 0.64
LINC01278-206ENST00000610088 KIAA0232Q92628 1395 aa19.02■□□□□ 0.64
LINC01278-206ENST00000610088 GPR162Q16538 588 aa19.01■□□□□ 0.63
LINC01278-206ENST00000610088 RAB3GAP2Q9H2M9 1393 aa19.01■□□□□ 0.63
LINC01278-206ENST00000610088 YTHDC2Q9H6S0 1430 aaKnown RBP19■□□□□ 0.63
LINC01278-206ENST00000610088 ZC3H6P61129 1189 aaKnown RBP18.99■□□□□ 0.63
LINC01278-206ENST00000610088 KNDC1Q76NI1 1749 aa18.99■□□□□ 0.63
LINC01278-206ENST00000610088 TRPM3Q9HCF6 1732 aaPredicted RBP18.98■□□□□ 0.63
LINC01278-206ENST00000610088 TCP11L2Q8N4U5 519 aa18.98■□□□□ 0.63
LINC01278-206ENST00000610088 ANKRD30BQ9BXX2 1392 aa18.97■□□□□ 0.63
LINC01278-206ENST00000610088 DLC1Q96QB1 1528 aa18.97■□□□□ 0.63
LINC01278-206ENST00000610088 PLSCR1O15162 318 aa18.97■□□□□ 0.63
LINC01278-206ENST00000610088 LARP1Q6PKG0 1096 aaKnown RBP18.97■□□□□ 0.63
LINC01278-206ENST00000610088 ALS2Q96Q42 1657 aa18.97■□□□□ 0.63
LINC01278-206ENST00000610088 PELP1Q8IZL8 1130 aaKnown RBP18.96■□□□□ 0.63
LINC01278-206ENST00000610088 STK32BQ9NY57 414 aa18.96■□□□□ 0.63
LINC01278-206ENST00000610088 SSH2Q76I76 1423 aa18.95■□□□□ 0.62
LINC01278-206ENST00000610088 SIRT1Q96EB6 747 aa18.95■□□□□ 0.62
LINC01278-206ENST00000610088 PRAM1Q96QH2 718 aa18.95■□□□□ 0.62
LINC01278-206ENST00000610088 SPATA31E1Q6ZUB1 1445 aa18.94■□□□□ 0.62
LINC01278-206ENST00000610088 NGDNQ8NEJ9 315 aaKnown RBP18.94■□□□□ 0.62
LINC01278-206ENST00000610088 ARXQ96QS3 562 aa18.94■□□□□ 0.62
LINC01278-206ENST00000610088 MTFR1LQ9H019 292 aa18.94■□□□□ 0.62
LINC01278-206ENST00000610088 ANKARQ7Z5J8 1434 aa18.93■□□□□ 0.62
LINC01278-206ENST00000610088 C11orf95C9JLR9 678 aaPredicted RBP18.93■□□□□ 0.62
LINC01278-206ENST00000610088 NUTM2GQ5VZR2 741 aa18.92■□□□□ 0.62
LINC01278-206ENST00000610088 PTF1AQ7RTS3 328 aa18.92■□□□□ 0.62
LINC01278-206ENST00000610088 PROM2Q8N271 834 aa18.92■□□□□ 0.62
LINC01278-206ENST00000610088 POGKQ9P215 609 aa18.92■□□□□ 0.62
LINC01278-206ENST00000610088 KLHL34Q8N239 644 aa18.91■□□□□ 0.62
LINC01278-206ENST00000610088 GOLGB1Q14789 3259 aaKnown RBP18.91■□□□□ 0.62
LINC01278-206ENST00000610088 OVOS2A0A0G2JMS6 1433 aa18.91■□□□□ 0.62
LINC01278-206ENST00000610088 OVOS2A0A0J9YW53 1432 aa18.91■□□□□ 0.62
LINC01278-206ENST00000610088 OVOS2Q6IE36 1432 aa18.91■□□□□ 0.62
LINC01278-206ENST00000610088 SLC15A2Q16348 729 aa18.9■□□□□ 0.62
LINC01278-206ENST00000610088 SGIP1Q9BQI5 828 aa18.9■□□□□ 0.62
LINC01278-206ENST00000610088 HIRIP3Q9BW71 556 aaPredicted RBP18.9■□□□□ 0.62
LINC01278-206ENST00000610088 CRYBG1Q9Y4K1 1723 aa18.9■□□□□ 0.62
LINC01278-206ENST00000610088 THRAP3Q9Y2W1 955 aaKnown RBP18.88■□□□□ 0.61
LINC01278-206ENST00000610088 RGPD3A6NKT7 1758 aaPredicted RBP18.87■□□□□ 0.61
LINC01278-206ENST00000610088 PIK3C2GO75747 1445 aa18.87■□□□□ 0.61
LINC01278-206ENST00000610088 DHX57Q6P158 1386 aaKnown RBP18.87■□□□□ 0.61
LINC01278-206ENST00000610088 RGPD4Q7Z3J3 1758 aa18.87■□□□□ 0.61
LINC01278-206ENST00000610088 PRR36Q9H6K5 1346 aa18.86■□□□□ 0.61
LINC01278-206ENST00000610088 HSPA6P17066 643 aa18.86■□□□□ 0.61
LINC01278-206ENST00000610088 TXNRD1Q16881 649 aa18.86■□□□□ 0.61
LINC01278-206ENST00000610088 SHANK3Q9BYB0 1731 aa18.86■□□□□ 0.61
LINC01278-206ENST00000610088 MAP3K5Q99683 1374 aa18.83■□□□□ 0.61
LINC01278-206ENST00000610088 MINK1Q8N4C8 1332 aaPredicted RBP18.83■□□□□ 0.61
LINC01278-206ENST00000610088 DDB1Q16531 1140 aa18.83■□□□□ 0.6
LINC01278-206ENST00000610088 CFAP70Q5T0N1 1121 aa18.83■□□□□ 0.6
LINC01278-206ENST00000610088 C14orf93Q9H972 538 aaKnown RBP18.83■□□□□ 0.6
LINC01278-206ENST00000610088 CAPN15O75808 1086 aa18.82■□□□□ 0.6
LINC01278-206ENST00000610088 PARP4Q9UKK3 1724 aaKnown RBP18.82■□□□□ 0.6
LINC01278-206ENST00000610088 PHRF1Q9P1Y6 1649 aaKnown RBP18.82■□□□□ 0.6
LINC01278-206ENST00000610088 EIF3AQ14152 1382 aaKnown RBP18.81■□□□□ 0.6
LINC01278-206ENST00000610088 PEAK1Q9H792 1746 aa18.8■□□□□ 0.6
LINC01278-206ENST00000610088 SBF2Q86WG5 1849 aa18.79■□□□□ 0.6
LINC01278-206ENST00000610088 ZBTB7CA1YPR0 619 aa18.79■□□□□ 0.6
LINC01278-206ENST00000610088 GPBP1L1Q9HC44 474 aaPredicted RBP18.79■□□□□ 0.6
LINC01278-206ENST00000610088 KDM2AQ9Y2K7 1162 aa18.79■□□□□ 0.6
LINC01278-206ENST00000610088 ATP7BP35670 1465 aa18.78■□□□□ 0.6
LINC01278-206ENST00000610088 ATP10DQ9P241 1426 aa18.78■□□□□ 0.6
LINC01278-206ENST00000610088 DCAF11Q8TEB1 546 aa18.77■□□□□ 0.6
LINC01278-206ENST00000610088 ZNF526Q8TF50 670 aaPredicted RBP18.77■□□□□ 0.6
LINC01278-206ENST00000610088 TULP4Q9NRJ4 1543 aa18.77■□□□□ 0.6
LINC01278-206ENST00000610088 WASLO00401 505 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms