RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 PANK2Q9BZ23 570 aa5.79□□□□□ -1.48
HDDC2-208ENST00000609021 PPP2R5AQ15172 486 aa5.78□□□□□ -1.48
HDDC2-208ENST00000609021 SASS6Q6UVJ0 657 aa5.78□□□□□ -1.48
HDDC2-208ENST00000609021 RASSF4Q9H2L5 321 aa5.78□□□□□ -1.48
HDDC2-208ENST00000609021 RIPOR2Q9Y4F9 1068 aa5.78□□□□□ -1.48
HDDC2-208ENST00000609021 ABCC2Q92887 1545 aa5.78□□□□□ -1.48
HDDC2-208ENST00000609021 ERCC6Q03468 1493 aa5.78□□□□□ -1.48
HDDC2-208ENST00000609021 LRRC9Q6ZRR7 1453 aa5.78□□□□□ -1.48
HDDC2-208ENST00000609021 RPAINQ86UA6 219 aa5.78□□□□□ -1.48
HDDC2-208ENST00000609021 PROCA1Q8NCQ7 364 aaPredicted RBP5.78□□□□□ -1.48
HDDC2-208ENST00000609021 TMX1Q9H3N1 280 aa5.78□□□□□ -1.48
HDDC2-208ENST00000609021 KDM6BO15054 1643 aa5.78□□□□□ -1.48
HDDC2-208ENST00000609021 PREX2Q70Z35 1606 aa5.78□□□□□ -1.48
HDDC2-208ENST00000609021 TCOF1Q13428 1488 aaKnown RBP5.78□□□□□ -1.48
HDDC2-208ENST00000609021 SPDYE4A6NLX3 237 aa5.78□□□□□ -1.48
HDDC2-208ENST00000609021 TMCO4Q5TGY1 634 aa5.78□□□□□ -1.48
HDDC2-208ENST00000609021 GET4Q7L5D6 327 aaPredicted RBP5.78□□□□□ -1.48
HDDC2-208ENST00000609021 APBB1IPQ7Z5R6 666 aaPredicted RBP5.78□□□□□ -1.48
HDDC2-208ENST00000609021 SUFUQ9UMX1 484 aa5.78□□□□□ -1.48
HDDC2-208ENST00000609021 DENND4BO75064 1496 aaPredicted RBP5.77□□□□□ -1.48
HDDC2-208ENST00000609021 GABPB1Q06547 395 aaPredicted RBP5.77□□□□□ -1.49
HDDC2-208ENST00000609021 SF3A1Q15459 793 aaKnown RBP5.77□□□□□ -1.49
HDDC2-208ENST00000609021 FRMD4BQ9Y2L6 1034 aa5.77□□□□□ -1.49
HDDC2-208ENST00000609021 SCP2P22307 547 aa5.77□□□□□ -1.49
HDDC2-208ENST00000609021 DDX10Q13206 875 aaKnown RBP5.77□□□□□ -1.49
HDDC2-208ENST00000609021 ZNF280DQ6N043 979 aa5.77□□□□□ -1.49
HDDC2-208ENST00000609021 ZCRB1Q8TBF4 217 aaKnown RBP5.77□□□□□ -1.49
HDDC2-208ENST00000609021 GRPEL1Q9HAV7 217 aa5.77□□□□□ -1.49
HDDC2-208ENST00000609021 DDX49Q9Y6V7 483 aaKnown RBP5.77□□□□□ -1.49
HDDC2-208ENST00000609021 ABCC10Q5T3U5 1492 aa5.77□□□□□ -1.49
HDDC2-208ENST00000609021 ADGBQ8N7X0 1667 aa5.77□□□□□ -1.49
HDDC2-208ENST00000609021 ERICH4A6NGS2 130 aa5.77□□□□□ -1.49
HDDC2-208ENST00000609021 CTAGE5O15320 804 aa5.77□□□□□ -1.49
HDDC2-208ENST00000609021 TPD52L2O43399 206 aaKnown RBP5.77□□□□□ -1.49
HDDC2-208ENST00000609021 PDCL2Q8N4E4 241 aa5.77□□□□□ -1.49
HDDC2-208ENST00000609021 TMCO5BA8MYB1 307 aa5.76□□□□□ -1.49
HDDC2-208ENST00000609021 KIF3CO14782 793 aa5.76□□□□□ -1.49
HDDC2-208ENST00000609021 CAPN2P17655 700 aa5.76□□□□□ -1.49
HDDC2-208ENST00000609021 NOM1Q5C9Z4 860 aaKnown RBP5.76□□□□□ -1.49
HDDC2-208ENST00000609021 KAT6BQ8WYB5 2073 aa5.76□□□□□ -1.49
HDDC2-208ENST00000609021 KIF16BQ96L93 1317 aa5.76□□□□□ -1.49
HDDC2-208ENST00000609021 ATP6V1AP38606 617 aa5.76□□□□□ -1.49
HDDC2-208ENST00000609021 ANKRD23Q86SG2 305 aa5.76□□□□□ -1.49
HDDC2-208ENST00000609021 CXorf38Q8TB03 319 aa5.76□□□□□ -1.49
HDDC2-208ENST00000609021 SIRT1Q96EB6 747 aa5.76□□□□□ -1.49
HDDC2-208ENST00000609021 MED4Q9NPJ6 270 aa5.76□□□□□ -1.49
HDDC2-208ENST00000609021 RBM27Q9P2N5 1060 aaKnown RBP5.76□□□□□ -1.49
HDDC2-208ENST00000609021 ABCA9Q8IUA7 1624 aa5.76□□□□□ -1.49
HDDC2-208ENST00000609021 MS4A1P11836 297 aa5.75□□□□□ -1.49
HDDC2-208ENST00000609021 GUCY2CP25092 1073 aa5.75□□□□□ -1.49
HDDC2-208ENST00000609021 KDM4CQ9H3R0 1056 aa5.75□□□□□ -1.49
HDDC2-208ENST00000609021 IRAK4Q9NWZ3 460 aa5.75□□□□□ -1.49
HDDC2-208ENST00000609021 BCORL1Q5H9F3 1711 aa5.75□□□□□ -1.49
HDDC2-208ENST00000609021 UHRF1BP1LA0JNW5 1464 aa5.75□□□□□ -1.49
HDDC2-208ENST00000609021 KIF13AQ9H1H9 1805 aa5.75□□□□□ -1.49
HDDC2-208ENST00000609021 SSFA2P28290 1259 aa5.75□□□□□ -1.49
HDDC2-208ENST00000609021 DNAJC21Q5F1R6 531 aaKnown RBP5.75□□□□□ -1.49
HDDC2-208ENST00000609021 HDGFL1Q5TGJ6 251 aa5.75□□□□□ -1.49
HDDC2-208ENST00000609021 WDR78Q5VTH9 848 aa5.75□□□□□ -1.49
HDDC2-208ENST00000609021 ERCC4Q92889 916 aaPredicted RBP5.75□□□□□ -1.49
HDDC2-208ENST00000609021 CXorf56Q9H5V9 222 aa5.75□□□□□ -1.49
HDDC2-208ENST00000609021 CWC15Q9P013 229 aaKnown RBP5.75□□□□□ -1.49
HDDC2-208ENST00000609021 CPSF2Q9P2I0 782 aaKnown RBP5.75□□□□□ -1.49
HDDC2-208ENST00000609021 NUB1Q9Y5A7 615 aa5.75□□□□□ -1.49
HDDC2-208ENST00000609021 FHOD3Q2V2M9 1422 aa5.75□□□□□ -1.49
HDDC2-208ENST00000609021 TTC37Q6PGP7 1564 aa5.75□□□□□ -1.49
HDDC2-208ENST00000609021 SIGLEC1Q9BZZ2 1709 aa5.75□□□□□ -1.49
HDDC2-208ENST00000609021 EPRSP07814 1512 aaKnown RBP5.75□□□□□ -1.49
HDDC2-208ENST00000609021 SRPK2P78362 688 aaKnown RBP5.75□□□□□ -1.49
HDDC2-208ENST00000609021 CCDC173Q0VFZ6 552 aa5.75□□□□□ -1.49
HDDC2-208ENST00000609021 FEZ2Q9UHY8 353 aaPredicted RBP5.75□□□□□ -1.49
HDDC2-208ENST00000609021 CDK13Q14004 1512 aaKnown RBP5.75□□□□□ -1.49
HDDC2-208ENST00000609021 FOXD4Q12950 439 aaPredicted RBP5.74□□□□□ -1.49
HDDC2-208ENST00000609021 FAM212AQ96EL1 285 aa5.74□□□□□ -1.49
HDDC2-208ENST00000609021 DRC1Q96MC2 740 aa5.74□□□□□ -1.49
HDDC2-208ENST00000609021 FEZ1Q99689 392 aa5.74□□□□□ -1.49
HDDC2-208ENST00000609021 BACH2Q9BYV9 841 aa5.74□□□□□ -1.49
HDDC2-208ENST00000609021 GOPCQ9HD26 462 aa5.74□□□□□ -1.49
HDDC2-208ENST00000609021 EHBP1L1Q8N3D4 1523 aa5.74□□□□□ -1.49
HDDC2-208ENST00000609021 DNMT1P26358 1616 aaKnown RBP5.74□□□□□ -1.49
HDDC2-208ENST00000609021 HSPA5P11021 654 aaKnown RBP5.74□□□□□ -1.49
HDDC2-208ENST00000609021 ITSN2Q9NZM3 1697 aa5.74□□□□□ -1.49
HDDC2-208ENST00000609021 SMARCA5O60264 1052 aaPredicted RBP5.74□□□□□ -1.49
HDDC2-208ENST00000609021 DDX46Q7L014 1031 aaKnown RBP5.74□□□□□ -1.49
HDDC2-208ENST00000609021 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.74□□□□□ -1.49
HDDC2-208ENST00000609021 FAM184AQ8NB25 1140 aa5.74□□□□□ -1.49
HDDC2-208ENST00000609021 ARHGEF1Q92888 912 aaKnown RBP5.74□□□□□ -1.49
HDDC2-208ENST00000609021 CHAF1AQ13111 956 aaPredicted RBP5.73□□□□□ -1.49
HDDC2-208ENST00000609021 MAP3K4Q9Y6R4 1608 aa5.73□□□□□ -1.49
HDDC2-208ENST00000609021 PTPN23Q9H3S7 1636 aa5.73□□□□□ -1.49
HDDC2-208ENST00000609021 KIF4AO95239 1232 aa5.73□□□□□ -1.49
HDDC2-208ENST00000609021 ABCD1P33897 745 aa5.73□□□□□ -1.49
HDDC2-208ENST00000609021 ANKRD20A12PQ8NF67 263 aa5.73□□□□□ -1.49
HDDC2-208ENST00000609021 ERBB4Q15303 1308 aa5.73□□□□□ -1.49
HDDC2-208ENST00000609021 NINLQ9Y2I6 1382 aa5.73□□□□□ -1.49
HDDC2-208ENST00000609021 TULP2O00295 520 aa5.73□□□□□ -1.49
HDDC2-208ENST00000609021 PAX7P23759 505 aa5.73□□□□□ -1.49
HDDC2-208ENST00000609021 MAP2K2P36507 400 aa5.73□□□□□ -1.49
HDDC2-208ENST00000609021 C1orf115Q9H7X2 142 aa5.73□□□□□ -1.49
HDDC2-208ENST00000609021 CCT2P78371 535 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms