RNA–Protein interactions for RNA: ENST00000607959.5

USF2-216, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 5

Gene USF2, Length 1,920 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-216ENST00000607959 NGDNQ8NEJ9 315 aaKnown RBP29.5■■■□□ 2.31
USF2-216ENST00000607959 PHF8Q9UPP1 1060 aa29.49■■■□□ 2.31
USF2-216ENST00000607959 DCCP43146 1447 aa29.48■■■□□ 2.31
USF2-216ENST00000607959 C1orf167Q5SNV9 1468 aa29.47■■■□□ 2.31
USF2-216ENST00000607959 ORAI2Q96SN7 254 aa29.46■■■□□ 2.31
USF2-216ENST00000607959 DMRT2Q9Y5R5 561 aa29.46■■■□□ 2.31
USF2-216ENST00000607959 MST1RQ04912 1400 aa29.46■■■□□ 2.31
USF2-216ENST00000607959 ESCO1Q5FWF5 840 aa29.45■■■□□ 2.3
USF2-216ENST00000607959 MTHFSP49914 203 aa29.44■■■□□ 2.3
USF2-216ENST00000607959 CENPBP07199 599 aaPredicted RBP29.42■■■□□ 2.3
USF2-216ENST00000607959 FBLN1P23142 703 aa29.42■■■□□ 2.3
USF2-216ENST00000607959 HNRNPUQ00839 825 aaKnown RBP eCLIP29.42■■■□□ 2.3
USF2-216ENST00000607959 OVOS2A0A0J9YW53 1432 aa29.42■■■□□ 2.3
USF2-216ENST00000607959 OVOS2Q6IE36 1432 aa29.42■■■□□ 2.3
USF2-216ENST00000607959 PIK3C2AO00443 1686 aa29.41■■■□□ 2.3
USF2-216ENST00000607959 SHPRHQ149N8 1683 aa29.4■■■□□ 2.3
USF2-216ENST00000607959 TTC21AQ8NDW8 1320 aa29.4■■■□□ 2.3
USF2-216ENST00000607959 SCAF1Q9H7N4 1312 aaKnown RBP29.4■■■□□ 2.3
USF2-216ENST00000607959 ATF3P18847 181 aa29.39■■■□□ 2.3
USF2-216ENST00000607959 MSH6P52701 1360 aa29.38■■■□□ 2.29
USF2-216ENST00000607959 COG3Q96JB2 828 aa29.38■■■□□ 2.29
USF2-216ENST00000607959 MAP2P11137 1827 aaKnown RBP29.37■■■□□ 2.29
USF2-216ENST00000607959 MARF1Q9Y4F3 1742 aaKnown RBP29.37■■■□□ 2.29
USF2-216ENST00000607959 ADAMTS8Q9UP79 889 aa29.37■■■□□ 2.29
USF2-216ENST00000607959 COL3A1P02461 1466 aaPredicted RBP29.36■■■□□ 2.29
USF2-216ENST00000607959 KIF1AQ12756 1690 aa29.35■■■□□ 2.29
USF2-216ENST00000607959 USP31Q70CQ4 1352 aa29.35■■■□□ 2.29
USF2-216ENST00000607959 CADPS2Q86UW7 1296 aa29.35■■■□□ 2.29
USF2-216ENST00000607959 POLKQ9UBT6 870 aa29.34■■■□□ 2.29
USF2-216ENST00000607959 BLMP54132 1417 aaPredicted RBP29.34■■■□□ 2.29
USF2-216ENST00000607959 INSRP06213 1382 aa29.34■■■□□ 2.29
USF2-216ENST00000607959 AATKQ6ZMQ8 1374 aa29.34■■■□□ 2.29
USF2-216ENST00000607959 USP54Q70EL1 1684 aa29.33■■■□□ 2.29
USF2-216ENST00000607959 FOXO3O43524 673 aa29.32■■■□□ 2.28
USF2-216ENST00000607959 PNPLA6Q8IY17 1366 aa29.32■■■□□ 2.28
USF2-216ENST00000607959 SMG6Q86US8 1419 aaKnown RBP29.32■■■□□ 2.28
USF2-216ENST00000607959 TRPM3Q9HCF6 1732 aaPredicted RBP29.3■■■□□ 2.28
USF2-216ENST00000607959 SENP3-EIF4A1A0A087X0R7 540 aa29.3■■■□□ 2.28
USF2-216ENST00000607959 EMILIN1Q9Y6C2 1016 aa29.3■■■□□ 2.28
USF2-216ENST00000607959 PSME1Q06323 249 aa29.29■■■□□ 2.28
USF2-216ENST00000607959 WDR43Q15061 677 aaKnown RBP eCLIP29.29■■■□□ 2.28
USF2-216ENST00000607959 LTBP4Q8N2S1 1624 aa29.28■■■□□ 2.28
USF2-216ENST00000607959 XPCQ01831 940 aaPredicted RBP29.27■■■□□ 2.28
USF2-216ENST00000607959 RRS1Q15050 365 aaKnown RBP29.26■■■□□ 2.27
USF2-216ENST00000607959 CFAP53Q96M91 514 aa29.26■■■□□ 2.27
USF2-216ENST00000607959 ZBED9Q6R2W3 1325 aa29.26■■■□□ 2.27
USF2-216ENST00000607959 PAK3O75914 559 aaPredicted RBP29.26■■■□□ 2.27
USF2-216ENST00000607959 NUTM2GQ5VZR2 741 aa29.25■■■□□ 2.27
USF2-216ENST00000607959 NLRP6P59044 892 aa29.24■■■□□ 2.27
USF2-216ENST00000607959 ABTB2Q8N961 1025 aa29.24■■■□□ 2.27
USF2-216ENST00000607959 DDX17Q92841 729 aaKnown RBP29.24■■■□□ 2.27
USF2-216ENST00000607959 KRT28Q7Z3Y7 464 aa29.22■■■□□ 2.27
USF2-216ENST00000607959 CDK12Q9NYV4 1490 aaPredicted RBP29.22■■■□□ 2.27
USF2-216ENST00000607959 PEAK1Q9H792 1746 aa29.22■■■□□ 2.27
USF2-216ENST00000607959 BRINP3Q76B58 766 aa29.2■■■□□ 2.27
USF2-216ENST00000607959 PPM1GO15355 546 aaPredicted RBP29.2■■■□□ 2.26
USF2-216ENST00000607959 SLAIN2Q9P270 581 aa29.2■■■□□ 2.26
USF2-216ENST00000607959 ALS2Q96Q42 1657 aa29.18■■■□□ 2.26
USF2-216ENST00000607959 PXDNQ92626 1479 aa29.17■■■□□ 2.26
USF2-216ENST00000607959 SOX12O15370 315 aa29.17■■■□□ 2.26
USF2-216ENST00000607959 CCDC146Q8IYE0 955 aa29.17■■■□□ 2.26
USF2-216ENST00000607959 DIAPH1O60610 1272 aaKnown RBP29.15■■■□□ 2.26
USF2-216ENST00000607959 MAP3K19Q56UN5 1328 aa29.15■■■□□ 2.26
USF2-216ENST00000607959 NFAT5O94916 1531 aa29.13■■■□□ 2.25
USF2-216ENST00000607959 NPHP3Q7Z494 1330 aa29.13■■■□□ 2.25
USF2-216ENST00000607959 IL13P35225 146 aa29.12■■■□□ 2.25
USF2-216ENST00000607959 SLIT3O75094 1523 aa29.11■■■□□ 2.25
USF2-216ENST00000607959 SBNO1A3KN83 1393 aa29.11■■■□□ 2.25
USF2-216ENST00000607959 U2AF1L5P0DN76 240 aaPredicted RBP29.1■■■□□ 2.25
USF2-216ENST00000607959 U2AF1Q01081 240 aaKnown RBP eCLIP29.1■■■□□ 2.25
USF2-216ENST00000607959 SALL2Q9Y467 1007 aaPredicted RBP29.1■■■□□ 2.25
USF2-216ENST00000607959 NUDCQ9Y266 331 aa29.09■■■□□ 2.25
USF2-216ENST00000607959 USP19O94966 1318 aa29.09■■■□□ 2.25
USF2-216ENST00000607959 U2SURPO15042 1029 aaKnown RBP29.08■■■□□ 2.25
USF2-216ENST00000607959 HSP90AB2PQ58FF8 381 aa29.08■■■□□ 2.25
USF2-216ENST00000607959 APAF1O14727 1248 aa29.07■■■□□ 2.24
USF2-216ENST00000607959 MED1Q15648 1581 aaPredicted RBP29.07■■■□□ 2.24
USF2-216ENST00000607959 IQSEC2Q5JU85 1478 aa29.06■■■□□ 2.24
USF2-216ENST00000607959 LTN1O94822 1766 aa29.05■■■□□ 2.24
USF2-216ENST00000607959 EIF4A2Q14240 407 aaKnown RBP29.05■■■□□ 2.24
USF2-216ENST00000607959 TNS3Q68CZ2 1445 aa29.05■■■□□ 2.24
USF2-216ENST00000607959 LMOD2Q6P5Q4 547 aa29.05■■■□□ 2.24
USF2-216ENST00000607959 FLT4P35916 1363 aa29.04■■■□□ 2.24
USF2-216ENST00000607959 RUNDC1Q96C34 613 aa29.04■■■□□ 2.24
USF2-216ENST00000607959 PLEKHF1Q96S99 279 aa29.04■■■□□ 2.24
USF2-216ENST00000607959 NHSL1Q5SYE7 1610 aa29.03■■■□□ 2.24
USF2-216ENST00000607959 SOS2Q07890 1332 aaPredicted RBP29.03■■■□□ 2.24
USF2-216ENST00000607959 SPATA31A3Q5VYP0 1347 aa29.03■■■□□ 2.24
USF2-216ENST00000607959 AEBP2Q6ZN18 517 aaPredicted RBP29.02■■■□□ 2.24
USF2-216ENST00000607959 RGPD1P0DJD0 1748 aa29.02■■■□□ 2.24
USF2-216ENST00000607959 ZNF521Q96K83 1311 aa29.01■■■□□ 2.23
USF2-216ENST00000607959 GCP02774 474 aa29.01■■■□□ 2.23
USF2-216ENST00000607959 KIF24Q5T7B8 1368 aa29.01■■■□□ 2.23
USF2-216ENST00000607959 CRYBG1Q9Y4K1 1723 aa29.01■■■□□ 2.23
USF2-216ENST00000607959 PHRF1Q9P1Y6 1649 aaKnown RBP29■■■□□ 2.23
USF2-216ENST00000607959 HOXC9P31274 260 aa29■■■□□ 2.23
USF2-216ENST00000607959 KCNH5Q8NCM2 988 aa29■■■□□ 2.23
USF2-216ENST00000607959 RSPH6AQ9H0K4 717 aa29■■■□□ 2.23
USF2-216ENST00000607959 AMPHP49418 695 aa28.99■■■□□ 2.23
USF2-216ENST00000607959 TCP11L2Q8N4U5 519 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms