RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 PMFBP1Q8TBY8 1022 aa19.85■□□□□ 0.77
CTSA-218ENST00000607814 ALS2Q96Q42 1657 aa19.84■□□□□ 0.77
CTSA-218ENST00000607814 POGKQ9P215 609 aa19.84■□□□□ 0.77
CTSA-218ENST00000607814 THSD7AQ9UPZ6 1657 aa19.84■□□□□ 0.77
CTSA-218ENST00000607814 SAFB2Q14151 953 aaKnown RBP eCLIP19.83■□□□□ 0.77
CTSA-218ENST00000607814 R3HDM1Q15032 1099 aaKnown RBP19.83■□□□□ 0.77
CTSA-218ENST00000607814 PARD3Q8TEW0 1356 aa19.83■□□□□ 0.76
CTSA-218ENST00000607814 TNS1Q9HBL0 1735 aaKnown RBP19.82■□□□□ 0.76
CTSA-218ENST00000607814 FAM196AQ6ZSG2 479 aa19.8■□□□□ 0.76
CTSA-218ENST00000607814 FAM182BQ5T319 152 aa19.79■□□□□ 0.76
CTSA-218ENST00000607814 CAMKK2Q96RR4 588 aa19.79■□□□□ 0.76
CTSA-218ENST00000607814 SIN3AQ96ST3 1273 aa19.79■□□□□ 0.76
CTSA-218ENST00000607814 PRDM11Q9NQV5 511 aa19.79■□□□□ 0.76
CTSA-218ENST00000607814 TULP4Q9NRJ4 1543 aa19.78■□□□□ 0.76
CTSA-218ENST00000607814 CRYBG1Q9Y4K1 1723 aa19.78■□□□□ 0.76
CTSA-218ENST00000607814 SPATA31A1Q5TZJ5 1347 aa19.77■□□□□ 0.76
CTSA-218ENST00000607814 TRIM26Q12899 539 aaPredicted RBP19.77■□□□□ 0.76
CTSA-218ENST00000607814 EZH2Q15910 746 aaKnown RBP19.77■□□□□ 0.76
CTSA-218ENST00000607814 ADGRB1O14514 1584 aa19.76■□□□□ 0.75
CTSA-218ENST00000607814 NEUROD1Q13562 356 aa19.75■□□□□ 0.75
CTSA-218ENST00000607814 PRR36Q9H6K5 1346 aa19.75■□□□□ 0.75
CTSA-218ENST00000607814 WASLO00401 505 aaPredicted RBP19.74■□□□□ 0.75
CTSA-218ENST00000607814 NGDNQ8NEJ9 315 aaKnown RBP19.74■□□□□ 0.75
CTSA-218ENST00000607814 TRIM37O94972 964 aa19.73■□□□□ 0.75
CTSA-218ENST00000607814 HIRIP3Q9BW71 556 aaPredicted RBP19.73■□□□□ 0.75
CTSA-218ENST00000607814 PAK3O75914 559 aaPredicted RBP19.72■□□□□ 0.75
CTSA-218ENST00000607814 APBA3O96018 575 aa19.72■□□□□ 0.75
CTSA-218ENST00000607814 TRAK1Q9UPV9 953 aa19.72■□□□□ 0.75
CTSA-218ENST00000607814 KIAA0232Q92628 1395 aa19.71■□□□□ 0.75
CTSA-218ENST00000607814 MINK1Q8N4C8 1332 aaPredicted RBP19.71■□□□□ 0.75
CTSA-218ENST00000607814 NBPF8Q3BBV2 869 aa19.7■□□□□ 0.74
CTSA-218ENST00000607814 NBPF14Q5TI25 921 aa19.7■□□□□ 0.74
CTSA-218ENST00000607814 BARGINQ6ZT62 677 aa19.7■□□□□ 0.74
CTSA-218ENST00000607814 ATP7BP35670 1465 aa19.7■□□□□ 0.74
CTSA-218ENST00000607814 RREB1Q92766 1687 aa19.69■□□□□ 0.74
CTSA-218ENST00000607814 YY1P25490 414 aa19.68■□□□□ 0.74
CTSA-218ENST00000607814 PDE3BQ13370 1112 aa19.68■□□□□ 0.74
CTSA-218ENST00000607814 STAC3Q96MF2 364 aa19.68■□□□□ 0.74
CTSA-218ENST00000607814 STRN4Q9NRL3 753 aa19.68■□□□□ 0.74
CTSA-218ENST00000607814 ITSN1Q15811 1721 aa19.68■□□□□ 0.74
CTSA-218ENST00000607814 C11orf95C9JLR9 678 aaPredicted RBP19.67■□□□□ 0.74
CTSA-218ENST00000607814 PHRF1Q9P1Y6 1649 aaKnown RBP19.66■□□□□ 0.74
CTSA-218ENST00000607814 CHRNA2Q15822 529 aa19.66■□□□□ 0.74
CTSA-218ENST00000607814 L3MBTL2Q969R5 705 aa19.66■□□□□ 0.74
CTSA-218ENST00000607814 NBPF1Q3BBV0 1214 aa19.65■□□□□ 0.74
CTSA-218ENST00000607814 SSH2Q76I76 1423 aa19.65■□□□□ 0.74
CTSA-218ENST00000607814 NUP188Q5SRE5 1749 aa19.65■□□□□ 0.74
CTSA-218ENST00000607814 EVA1CP58658 441 aa19.64■□□□□ 0.73
CTSA-218ENST00000607814 NUDT16Q96DE0 195 aaKnown RBP19.64■□□□□ 0.73
CTSA-218ENST00000607814 THRAP3Q9Y2W1 955 aaKnown RBP19.64■□□□□ 0.73
CTSA-218ENST00000607814 NINLQ9Y2I6 1382 aa19.63■□□□□ 0.73
CTSA-218ENST00000607814 DCAF8L1A6NGE4 600 aa19.63■□□□□ 0.73
CTSA-218ENST00000607814 ZC3H6P61129 1189 aaKnown RBP19.63■□□□□ 0.73
CTSA-218ENST00000607814 SPON1Q9HCB6 807 aa19.63■□□□□ 0.73
CTSA-218ENST00000607814 USP35Q9P2H5 1018 aa19.63■□□□□ 0.73
CTSA-218ENST00000607814 POLR3AO14802 1390 aaPredicted RBP19.62■□□□□ 0.73
CTSA-218ENST00000607814 CPDO75976 1380 aa19.62■□□□□ 0.73
CTSA-218ENST00000607814 TCP11L2Q8N4U5 519 aa19.62■□□□□ 0.73
CTSA-218ENST00000607814 KCNQ2O43526 872 aa19.6■□□□□ 0.73
CTSA-218ENST00000607814 PPP1R1BQ9UD71 204 aaPredicted RBP19.6■□□□□ 0.73
CTSA-218ENST00000607814 CAMTA1Q9Y6Y1 1673 aa19.59■□□□□ 0.73
CTSA-218ENST00000607814 NRKQ7Z2Y5 1582 aa19.58■□□□□ 0.73
CTSA-218ENST00000607814 LARP1Q6PKG0 1096 aaKnown RBP19.58■□□□□ 0.72
CTSA-218ENST00000607814 CCDC61Q9Y6R9 512 aa19.58■□□□□ 0.72
CTSA-218ENST00000607814 ARHGEF28Q8N1W1 1705 aaKnown RBP19.58■□□□□ 0.72
CTSA-218ENST00000607814 LMO7Q8WWI1 1683 aa19.58■□□□□ 0.72
CTSA-218ENST00000607814 PLEKHG3A1L390 1219 aa19.57■□□□□ 0.72
CTSA-218ENST00000607814 PARP4Q9UKK3 1724 aaKnown RBP19.56■□□□□ 0.72
CTSA-218ENST00000607814 USP19O94966 1318 aa19.56■□□□□ 0.72
CTSA-218ENST00000607814 ACEP12821 1306 aa19.56■□□□□ 0.72
CTSA-218ENST00000607814 NUTM2GQ5VZR2 741 aa19.56■□□□□ 0.72
CTSA-218ENST00000607814 ABTB2Q8N961 1025 aa19.56■□□□□ 0.72
CTSA-218ENST00000607814 CDK19Q9BWU1 502 aa19.56■□□□□ 0.72
CTSA-218ENST00000607814 PCGF6Q9BYE7 350 aa19.56■□□□□ 0.72
CTSA-218ENST00000607814 RGPD3A6NKT7 1758 aaPredicted RBP19.56■□□□□ 0.72
CTSA-218ENST00000607814 RGPD4Q7Z3J3 1758 aa19.56■□□□□ 0.72
CTSA-218ENST00000607814 TOPAZ1Q8N9V7 1692 aa19.56■□□□□ 0.72
CTSA-218ENST00000607814 OVOS2A0A0G2JMS6 1433 aa19.54■□□□□ 0.72
CTSA-218ENST00000607814 OVOS2A0A0J9YW53 1432 aa19.54■□□□□ 0.72
CTSA-218ENST00000607814 OVOS2Q6IE36 1432 aa19.54■□□□□ 0.72
CTSA-218ENST00000607814 PLSCR1O15162 318 aa19.54■□□□□ 0.72
CTSA-218ENST00000607814 UTRNP46939 3433 aa19.53■□□□□ 0.72
CTSA-218ENST00000607814 NLRP13Q86W25 1043 aa19.52■□□□□ 0.72
CTSA-218ENST00000607814 BRD4O60885 1362 aaPredicted RBP19.52■□□□□ 0.72
CTSA-218ENST00000607814 COL5A2P05997 1499 aaPredicted RBP19.52■□□□□ 0.72
CTSA-218ENST00000607814 CRB1P82279 1406 aa19.51■□□□□ 0.71
CTSA-218ENST00000607814 GCP02774 474 aa19.51■□□□□ 0.71
CTSA-218ENST00000607814 PEAK1Q9H792 1746 aa19.5■□□□□ 0.71
CTSA-218ENST00000607814 BCL11BQ9C0K0 894 aaPredicted RBP19.47■□□□□ 0.71
CTSA-218ENST00000607814 SBF2Q86WG5 1849 aa19.46■□□□□ 0.71
CTSA-218ENST00000607814 AATKQ6ZMQ8 1374 aa19.46■□□□□ 0.71
CTSA-218ENST00000607814 BCL9O00512 1426 aa19.46■□□□□ 0.71
CTSA-218ENST00000607814 DDB1Q16531 1140 aa19.46■□□□□ 0.71
CTSA-218ENST00000607814 CASZ1Q86V15 1759 aa19.46■□□□□ 0.71
CTSA-218ENST00000607814 KIAA1210Q9ULL0 1709 aa19.45■□□□□ 0.7
CTSA-218ENST00000607814 TONSLQ96HA7 1378 aa19.44■□□□□ 0.7
CTSA-218ENST00000607814 LRRC37A3O60309 1634 aa19.44■□□□□ 0.7
CTSA-218ENST00000607814 CDCA7Q9BWT1 371 aaPredicted RBP19.44■□□□□ 0.7
CTSA-218ENST00000607814 ANO8Q9HCE9 1232 aaPredicted RBP19.44■□□□□ 0.7
CTSA-218ENST00000607814 ROCK2O75116 1388 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms