RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 PPIP5K1Q6PFW1 1433 aa27.28■■□□□ 1.96
CTSA-217ENST00000607482 NUTM2GQ5VZR2 741 aa27.27■■□□□ 1.96
CTSA-217ENST00000607482 UPF1Q92900 1129 aaKnown RBP eCLIP27.27■■□□□ 1.96
CTSA-217ENST00000607482 FAM83GA6ND36 823 aa27.26■■□□□ 1.95
CTSA-217ENST00000607482 ABTB2Q8N961 1025 aa27.26■■□□□ 1.95
CTSA-217ENST00000607482 TRPM3Q9HCF6 1732 aaPredicted RBP27.26■■□□□ 1.95
CTSA-217ENST00000607482 POLR3AO14802 1390 aaPredicted RBP27.25■■□□□ 1.95
CTSA-217ENST00000607482 CABP1Q9NZU7 370 aa27.25■■□□□ 1.95
CTSA-217ENST00000607482 PRDM11Q9NQV5 511 aa27.24■■□□□ 1.95
CTSA-217ENST00000607482 SLIT2O94813 1529 aa27.24■■□□□ 1.95
CTSA-217ENST00000607482 BTG4Q9NY30 223 aa27.23■■□□□ 1.95
CTSA-217ENST00000607482 A0A0G2JS52 829 aa27.22■■□□□ 1.95
CTSA-217ENST00000607482 MYT1Q01538 1121 aa27.22■■□□□ 1.95
CTSA-217ENST00000607482 PCGF6Q9BYE7 350 aa27.22■■□□□ 1.95
CTSA-217ENST00000607482 ATAD2Q6PL18 1390 aa27.22■■□□□ 1.95
CTSA-217ENST00000607482 ALS2Q96Q42 1657 aa27.21■■□□□ 1.95
CTSA-217ENST00000607482 VPS72Q15906 364 aa27.21■■□□□ 1.95
CTSA-217ENST00000607482 TOPAZ1Q8N9V7 1692 aa27.2■■□□□ 1.94
CTSA-217ENST00000607482 ABCA3Q99758 1704 aa27.19■■□□□ 1.94
CTSA-217ENST00000607482 NLRP13Q86W25 1043 aa27.18■■□□□ 1.94
CTSA-217ENST00000607482 RALGAPBQ86X10 1494 aa27.18■■□□□ 1.94
CTSA-217ENST00000607482 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.17■■□□□ 1.94
CTSA-217ENST00000607482 ZC3H6P61129 1189 aaKnown RBP27.17■■□□□ 1.94
CTSA-217ENST00000607482 PLCH1Q4KWH8 1693 aa27.15■■□□□ 1.94
CTSA-217ENST00000607482 NWD2Q9ULI1 1742 aa27.13■■□□□ 1.93
CTSA-217ENST00000607482 BRD4O60885 1362 aaPredicted RBP27.13■■□□□ 1.93
CTSA-217ENST00000607482 KIAA0232Q92628 1395 aa27.13■■□□□ 1.93
CTSA-217ENST00000607482 EVA1CP58658 441 aa27.13■■□□□ 1.93
CTSA-217ENST00000607482 CHRNA2Q15822 529 aa27.13■■□□□ 1.93
CTSA-217ENST00000607482 ZNF692Q9BU19 519 aaPredicted RBP27.13■■□□□ 1.93
CTSA-217ENST00000607482 NLRP6P59044 892 aa27.12■■□□□ 1.93
CTSA-217ENST00000607482 SEPT12Q8IYM1 358 aa27.12■■□□□ 1.93
CTSA-217ENST00000607482 COL14A1Q05707 1796 aaKnown RBP27.12■■□□□ 1.93
CTSA-217ENST00000607482 ZBTB7CA1YPR0 619 aa27.11■■□□□ 1.93
CTSA-217ENST00000607482 STRN4Q9NRL3 753 aa27.11■■□□□ 1.93
CTSA-217ENST00000607482 TMC1Q8TDI8 760 aa27.1■■□□□ 1.93
CTSA-217ENST00000607482 USP6P35125 1406 aa27.08■■□□□ 1.93
CTSA-217ENST00000607482 FAM98CQ17RN3 349 aaKnown RBP27.08■■□□□ 1.93
CTSA-217ENST00000607482 GLI3P10071 1580 aa27.07■■□□□ 1.92
CTSA-217ENST00000607482 GCP02774 474 aa27.06■■□□□ 1.92
CTSA-217ENST00000607482 SBNO2Q9Y2G9 1366 aa27.05■■□□□ 1.92
CTSA-217ENST00000607482 SLC24A1O60721 1099 aa27.04■■□□□ 1.92
CTSA-217ENST00000607482 CCDC125Q86Z20 511 aa27.04■■□□□ 1.92
CTSA-217ENST00000607482 KTN1Q86UP2 1357 aaKnown RBP27.04■■□□□ 1.92
CTSA-217ENST00000607482 KRT27Q7Z3Y8 459 aa27.03■■□□□ 1.92
CTSA-217ENST00000607482 PHRF1Q9P1Y6 1649 aaKnown RBP27.03■■□□□ 1.92
CTSA-217ENST00000607482 USP19O94966 1318 aa27.02■■□□□ 1.92
CTSA-217ENST00000607482 SPATA31A5Q5VU36 1347 aa27.02■■□□□ 1.92
CTSA-217ENST00000607482 SPATA31A7Q8IWB4 1347 aa27.02■■□□□ 1.92
CTSA-217ENST00000607482 SF3B2Q13435 895 aaKnown RBP27.02■■□□□ 1.92
CTSA-217ENST00000607482 HDGFL2Q7Z4V5 671 aaPredicted RBP27.02■■□□□ 1.92
CTSA-217ENST00000607482 USP35Q9P2H5 1018 aa27.02■■□□□ 1.92
CTSA-217ENST00000607482 CRYBG1Q9Y4K1 1723 aa27.02■■□□□ 1.92
CTSA-217ENST00000607482 ST20-MTHFSA0A0A6YYL1 179 aa27.01■■□□□ 1.91
CTSA-217ENST00000607482 ONECUT3O60422 494 aaPredicted RBP27.01■■□□□ 1.91
CTSA-217ENST00000607482 TTC21BQ7Z4L5 1316 aa27■■□□□ 1.91
CTSA-217ENST00000607482 TTC21AQ8NDW8 1320 aa26.99■■□□□ 1.91
CTSA-217ENST00000607482 CLSPNQ9HAW4 1339 aa26.99■■□□□ 1.91
CTSA-217ENST00000607482 SOX12O15370 315 aa26.99■■□□□ 1.91
CTSA-217ENST00000607482 CCER1Q8TC90 406 aaPredicted RBP26.99■■□□□ 1.91
CTSA-217ENST00000607482 TERF2IPQ9NYB0 399 aa26.99■■□□□ 1.91
CTSA-217ENST00000607482 TIMELESSQ9UNS1 1208 aa26.99■■□□□ 1.91
CTSA-217ENST00000607482 NRAPQ86VF7 1730 aa26.99■■□□□ 1.91
CTSA-217ENST00000607482 CPDO75976 1380 aa26.98■■□□□ 1.91
CTSA-217ENST00000607482 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.98■■□□□ 1.91
CTSA-217ENST00000607482 KCNH5Q8NCM2 988 aa26.97■■□□□ 1.91
CTSA-217ENST00000607482 NRKQ7Z2Y5 1582 aa26.96■■□□□ 1.91
CTSA-217ENST00000607482 SPATA31A1Q5TZJ5 1347 aa26.95■■□□□ 1.91
CTSA-217ENST00000607482 SLC12A5Q9H2X9 1139 aa26.94■■□□□ 1.9
CTSA-217ENST00000607482 PUS7Q96PZ0 661 aaKnown RBP26.93■■□□□ 1.9
CTSA-217ENST00000607482 CPSF1Q10570 1443 aaKnown RBP26.92■■□□□ 1.9
CTSA-217ENST00000607482 SSH2Q76I76 1423 aa26.92■■□□□ 1.9
CTSA-217ENST00000607482 EP400Q96L91 3159 aa26.92■■□□□ 1.9
CTSA-217ENST00000607482 LARP1Q6PKG0 1096 aaKnown RBP26.92■■□□□ 1.9
CTSA-217ENST00000607482 TMF1P82094 1093 aa26.91■■□□□ 1.9
CTSA-217ENST00000607482 USP47Q96K76 1375 aa26.91■■□□□ 1.9
CTSA-217ENST00000607482 BRWD3Q6RI45 1802 aa26.9■■□□□ 1.9
CTSA-217ENST00000607482 BLMP54132 1417 aaPredicted RBP26.9■■□□□ 1.9
CTSA-217ENST00000607482 AKAP12Q02952 1782 aa26.89■■□□□ 1.9
CTSA-217ENST00000607482 TCP11L2Q8N4U5 519 aa26.89■■□□□ 1.9
CTSA-217ENST00000607482 TESK2Q96S53 571 aa26.89■■□□□ 1.9
CTSA-217ENST00000607482 PDE3BQ13370 1112 aa26.88■■□□□ 1.89
CTSA-217ENST00000607482 PIK3C2AO00443 1686 aa26.88■■□□□ 1.89
CTSA-217ENST00000607482 CAMTA1Q9Y6Y1 1673 aa26.88■■□□□ 1.89
CTSA-217ENST00000607482 AATKQ6ZMQ8 1374 aa26.87■■□□□ 1.89
CTSA-217ENST00000607482 CSB-PGBD3P0DP91 1061 aa26.87■■□□□ 1.89
CTSA-217ENST00000607482 TOM1L2Q6ZVM7 507 aa26.87■■□□□ 1.89
CTSA-217ENST00000607482 CDCA8Q53HL2 280 aa26.86■■□□□ 1.89
CTSA-217ENST00000607482 SLIT3O75094 1523 aa26.85■■□□□ 1.89
CTSA-217ENST00000607482 NINLQ9Y2I6 1382 aa26.85■■□□□ 1.89
CTSA-217ENST00000607482 FAM182BQ5T319 152 aa26.85■■□□□ 1.89
CTSA-217ENST00000607482 BARGINQ6ZT62 677 aa26.85■■□□□ 1.89
CTSA-217ENST00000607482 NME9Q86XW9 330 aa26.85■■□□□ 1.89
CTSA-217ENST00000607482 ZRANB1Q9UGI0 708 aa26.85■■□□□ 1.89
CTSA-217ENST00000607482 THRAP3Q9Y2W1 955 aaKnown RBP26.84■■□□□ 1.89
CTSA-217ENST00000607482 EDC4Q6P2E9 1401 aaKnown RBP26.82■■□□□ 1.88
CTSA-217ENST00000607482 COL5A2P05997 1499 aaPredicted RBP26.82■■□□□ 1.88
CTSA-217ENST00000607482 ARHGEF25Q86VW2 580 aa26.82■■□□□ 1.88
CTSA-217ENST00000607482 A0A1W2PP64 1363 aa26.82■■□□□ 1.88
CTSA-217ENST00000607482 BAG6P46379 1132 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms