RNA–Protein interactions for RNA: ENST00000606699.5

NECAB3-220, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,022 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-220ENST00000606699 SPATA31A7Q8IWB4 1347 aa27.16■■□□□ 1.94
NECAB3-220ENST00000606699 COL14A1Q05707 1796 aaKnown RBP27.15■■□□□ 1.94
NECAB3-220ENST00000606699 RAB3GAP2Q9H2M9 1393 aa27.15■■□□□ 1.94
NECAB3-220ENST00000606699 DCAF11Q8TEB1 546 aa27.15■■□□□ 1.94
NECAB3-220ENST00000606699 ALS2Q96Q42 1657 aa27.14■■□□□ 1.94
NECAB3-220ENST00000606699 NRAPQ86VF7 1730 aa27.14■■□□□ 1.94
NECAB3-220ENST00000606699 KDM2AQ9Y2K7 1162 aa27.14■■□□□ 1.94
NECAB3-220ENST00000606699 PAK3O75914 559 aaPredicted RBP27.12■■□□□ 1.93
NECAB3-220ENST00000606699 PRDM11Q9NQV5 511 aa27.11■■□□□ 1.93
NECAB3-220ENST00000606699 LRP5O75197 1615 aa27.11■■□□□ 1.93
NECAB3-220ENST00000606699 HRCP23327 699 aa27.09■■□□□ 1.93
NECAB3-220ENST00000606699 EN1Q05925 392 aaPredicted RBP27.07■■□□□ 1.92
NECAB3-220ENST00000606699 PSDA5PKW4 1024 aaPredicted RBP27.06■■□□□ 1.92
NECAB3-220ENST00000606699 NUDT16Q96DE0 195 aaKnown RBP27.06■■□□□ 1.92
NECAB3-220ENST00000606699 DISP2A7MBM2 1401 aa27.06■■□□□ 1.92
NECAB3-220ENST00000606699 SPATA31A1Q5TZJ5 1347 aa27.04■■□□□ 1.92
NECAB3-220ENST00000606699 FAM182BQ5T319 152 aa27.03■■□□□ 1.92
NECAB3-220ENST00000606699 KIAA0232Q92628 1395 aa27.02■■□□□ 1.92
NECAB3-220ENST00000606699 RGPD1P0DJD0 1748 aa27.02■■□□□ 1.92
NECAB3-220ENST00000606699 CRYBG1Q9Y4K1 1723 aa27.02■■□□□ 1.92
NECAB3-220ENST00000606699 THSD7AQ9UPZ6 1657 aa27.01■■□□□ 1.92
NECAB3-220ENST00000606699 ATP7BP35670 1465 aa27.01■■□□□ 1.91
NECAB3-220ENST00000606699 FAM196AQ6ZSG2 479 aa27.01■■□□□ 1.91
NECAB3-220ENST00000606699 CDK19Q9BWU1 502 aa26.99■■□□□ 1.91
NECAB3-220ENST00000606699 POLR3AO14802 1390 aaPredicted RBP26.98■■□□□ 1.91
NECAB3-220ENST00000606699 CHRNA2Q15822 529 aa26.98■■□□□ 1.91
NECAB3-220ENST00000606699 CCDC61Q9Y6R9 512 aa26.98■■□□□ 1.91
NECAB3-220ENST00000606699 ZC3H6P61129 1189 aaKnown RBP26.97■■□□□ 1.91
NECAB3-220ENST00000606699 STRN4Q9NRL3 753 aa26.97■■□□□ 1.91
NECAB3-220ENST00000606699 ITSN1Q15811 1721 aa26.96■■□□□ 1.91
NECAB3-220ENST00000606699 PLEKHG3A1L390 1219 aa26.96■■□□□ 1.91
NECAB3-220ENST00000606699 R3HDM1Q15032 1099 aaKnown RBP26.96■■□□□ 1.91
NECAB3-220ENST00000606699 NBPF8Q3BBV2 869 aa26.96■■□□□ 1.91
NECAB3-220ENST00000606699 BARGINQ6ZT62 677 aa26.96■■□□□ 1.91
NECAB3-220ENST00000606699 CAMKK2Q96RR4 588 aa26.96■■□□□ 1.91
NECAB3-220ENST00000606699 EZH2Q15910 746 aaKnown RBP26.95■■□□□ 1.9
NECAB3-220ENST00000606699 ACEP12821 1306 aa26.94■■□□□ 1.9
NECAB3-220ENST00000606699 TRIM37O94972 964 aa26.94■■□□□ 1.9
NECAB3-220ENST00000606699 EVA1CP58658 441 aa26.94■■□□□ 1.9
NECAB3-220ENST00000606699 PARD3Q8TEW0 1356 aa26.94■■□□□ 1.9
NECAB3-220ENST00000606699 ARHGEF28Q8N1W1 1705 aaKnown RBP26.93■■□□□ 1.9
NECAB3-220ENST00000606699 NUTM2GQ5VZR2 741 aa26.92■■□□□ 1.9
NECAB3-220ENST00000606699 PDE3BQ13370 1112 aa26.91■■□□□ 1.9
NECAB3-220ENST00000606699 ABTB2Q8N961 1025 aa26.91■■□□□ 1.9
NECAB3-220ENST00000606699 APBA3O96018 575 aa26.9■■□□□ 1.9
NECAB3-220ENST00000606699 TNS1Q9HBL0 1735 aaKnown RBP26.9■■□□□ 1.9
NECAB3-220ENST00000606699 SSH2Q76I76 1423 aa26.9■■□□□ 1.9
NECAB3-220ENST00000606699 CPDO75976 1380 aa26.89■■□□□ 1.9
NECAB3-220ENST00000606699 USP35Q9P2H5 1018 aa26.89■■□□□ 1.9
NECAB3-220ENST00000606699 PHRF1Q9P1Y6 1649 aaKnown RBP26.89■■□□□ 1.9
NECAB3-220ENST00000606699 TCP11L2Q8N4U5 519 aa26.88■■□□□ 1.89
NECAB3-220ENST00000606699 THRAP3Q9Y2W1 955 aaKnown RBP26.88■■□□□ 1.89
NECAB3-220ENST00000606699 USP19O94966 1318 aa26.87■■□□□ 1.89
NECAB3-220ENST00000606699 NLRP13Q86W25 1043 aa26.86■■□□□ 1.89
NECAB3-220ENST00000606699 C11orf95C9JLR9 678 aaPredicted RBP26.85■■□□□ 1.89
NECAB3-220ENST00000606699 LARP1Q6PKG0 1096 aaKnown RBP26.85■■□□□ 1.89
NECAB3-220ENST00000606699 BRD4O60885 1362 aaPredicted RBP26.84■■□□□ 1.89
NECAB3-220ENST00000606699 TOPAZ1Q8N9V7 1692 aa26.83■■□□□ 1.89
NECAB3-220ENST00000606699 CAMTA1Q9Y6Y1 1673 aa26.83■■□□□ 1.89
NECAB3-220ENST00000606699 GCP02774 474 aa26.83■■□□□ 1.89
NECAB3-220ENST00000606699 NBPF14Q5TI25 921 aa26.81■■□□□ 1.88
NECAB3-220ENST00000606699 KIAA1210Q9ULL0 1709 aa26.81■■□□□ 1.88
NECAB3-220ENST00000606699 NRKQ7Z2Y5 1582 aa26.8■■□□□ 1.88
NECAB3-220ENST00000606699 SRPK2P78362 688 aaKnown RBP26.79■■□□□ 1.88
NECAB3-220ENST00000606699 NBPF1Q3BBV0 1214 aa26.79■■□□□ 1.88
NECAB3-220ENST00000606699 LMO7Q8WWI1 1683 aa26.78■■□□□ 1.88
NECAB3-220ENST00000606699 PPIP5K1Q6PFW1 1433 aa26.77■■□□□ 1.88
NECAB3-220ENST00000606699 CENPJQ9HC77 1338 aaPredicted RBP26.77■■□□□ 1.88
NECAB3-220ENST00000606699 CABP2Q9NPB3 220 aa26.74■■□□□ 1.87
NECAB3-220ENST00000606699 COL5A2P05997 1499 aaPredicted RBP26.74■■□□□ 1.87
NECAB3-220ENST00000606699 CRB1P82279 1406 aa26.73■■□□□ 1.87
NECAB3-220ENST00000606699 RREB1Q92766 1687 aa26.72■■□□□ 1.87
NECAB3-220ENST00000606699 AATKQ6ZMQ8 1374 aa26.71■■□□□ 1.87
NECAB3-220ENST00000606699 NLRP6P59044 892 aa26.71■■□□□ 1.87
NECAB3-220ENST00000606699 CABP1Q9NZU7 370 aa26.7■■□□□ 1.86
NECAB3-220ENST00000606699 USP6P35125 1406 aa26.68■■□□□ 1.86
NECAB3-220ENST00000606699 PLSCR1O15162 318 aa26.68■■□□□ 1.86
NECAB3-220ENST00000606699 SPON1Q9HCB6 807 aa26.68■■□□□ 1.86
NECAB3-220ENST00000606699 PARP4Q9UKK3 1724 aaKnown RBP26.68■■□□□ 1.86
NECAB3-220ENST00000606699 OVOS2A0A0G2JMS6 1433 aa26.67■■□□□ 1.86
NECAB3-220ENST00000606699 OVOS2A0A0J9YW53 1432 aa26.67■■□□□ 1.86
NECAB3-220ENST00000606699 OVOS2Q6IE36 1432 aa26.67■■□□□ 1.86
NECAB3-220ENST00000606699 NUP188Q5SRE5 1749 aa26.67■■□□□ 1.86
NECAB3-220ENST00000606699 KCNQ2O43526 872 aa26.65■■□□□ 1.86
NECAB3-220ENST00000606699 DDB1Q16531 1140 aa26.65■■□□□ 1.86
NECAB3-220ENST00000606699 TRIM26Q12899 539 aaPredicted RBP26.64■■□□□ 1.86
NECAB3-220ENST00000606699 TOM1L2Q6ZVM7 507 aa26.64■■□□□ 1.86
NECAB3-220ENST00000606699 CDCA7Q9BWT1 371 aaPredicted RBP26.64■■□□□ 1.86
NECAB3-220ENST00000606699 SLIT3O75094 1523 aa26.64■■□□□ 1.85
NECAB3-220ENST00000606699 ZBTB7CA1YPR0 619 aa26.63■■□□□ 1.85
NECAB3-220ENST00000606699 ZNF692Q9BU19 519 aaPredicted RBP26.62■■□□□ 1.85
NECAB3-220ENST00000606699 BCL11BQ9C0K0 894 aaPredicted RBP26.62■■□□□ 1.85
NECAB3-220ENST00000606699 PPP1R1BQ9UD71 204 aaPredicted RBP26.62■■□□□ 1.85
NECAB3-220ENST00000606699 EVC2Q86UK5 1308 aa26.62■■□□□ 1.85
NECAB3-220ENST00000606699 WDR17Q8IZU2 1322 aa26.61■■□□□ 1.85
NECAB3-220ENST00000606699 BCL9O00512 1426 aa26.59■■□□□ 1.85
NECAB3-220ENST00000606699 KCNH5Q8NCM2 988 aa26.59■■□□□ 1.85
NECAB3-220ENST00000606699 AXIN2Q9Y2T1 843 aa26.59■■□□□ 1.85
NECAB3-220ENST00000606699 PEAK1Q9H792 1746 aa26.59■■□□□ 1.85
NECAB3-220ENST00000606699 DCAF8L1A6NGE4 600 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms