RNA–Protein interactions for RNA: ENST00000605216.5

ZSWIM8-223, Transcript of zinc finger SWIM-type containing 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZSWIM8, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-223ENST00000605216 RAPGEF4Q8WZA2 1011 aa20.35■□□□□ 0.85
ZSWIM8-223ENST00000605216 CAVIN1Q6NZI2 390 aaKnown RBP20.35■□□□□ 0.85
ZSWIM8-223ENST00000605216 AAMPQ13685 434 aa20.35■□□□□ 0.85
ZSWIM8-223ENST00000605216 JMYQ8N9B5 988 aa20.34■□□□□ 0.85
ZSWIM8-223ENST00000605216 USP8P40818 1118 aa20.34■□□□□ 0.85
ZSWIM8-223ENST00000605216 HIP1O00291 1037 aa20.34■□□□□ 0.85
ZSWIM8-223ENST00000605216 RUNDC1Q96C34 613 aa20.34■□□□□ 0.85
ZSWIM8-223ENST00000605216 RB1CC1Q8TDY2 1594 aa20.33■□□□□ 0.85
ZSWIM8-223ENST00000605216 TANGO6Q9C0B7 1094 aa20.33■□□□□ 0.85
ZSWIM8-223ENST00000605216 CENPHQ9H3R5 247 aa20.33■□□□□ 0.85
ZSWIM8-223ENST00000605216 CCDC97Q96F63 343 aaPredicted RBP20.33■□□□□ 0.84
ZSWIM8-223ENST00000605216 NEBLO76041 1014 aa20.32■□□□□ 0.84
ZSWIM8-223ENST00000605216 DESP17661 470 aa20.32■□□□□ 0.84
ZSWIM8-223ENST00000605216 NFKBIBQ15653 356 aa20.32■□□□□ 0.84
ZSWIM8-223ENST00000605216 IQCEQ6IPM2 695 aa20.32■□□□□ 0.84
ZSWIM8-223ENST00000605216 MCM2P49736 904 aa20.32■□□□□ 0.84
ZSWIM8-223ENST00000605216 CCDC112Q8NEF3 446 aa20.32■□□□□ 0.84
ZSWIM8-223ENST00000605216 DNAJC2Q99543 621 aaKnown RBP20.31■□□□□ 0.84
ZSWIM8-223ENST00000605216 TRAK2O60296 914 aa20.31■□□□□ 0.84
ZSWIM8-223ENST00000605216 CLASRPQ8N2M8 674 aaKnown RBP20.31■□□□□ 0.84
ZSWIM8-223ENST00000605216 DYDC1Q8WWB3 177 aa20.3■□□□□ 0.84
ZSWIM8-223ENST00000605216 SPC24Q8NBT2 197 aa20.3■□□□□ 0.84
ZSWIM8-223ENST00000605216 ZHX3Q9H4I2 956 aa20.3■□□□□ 0.84
ZSWIM8-223ENST00000605216 PRPF40AO75400 957 aaKnown RBP20.29■□□□□ 0.84
ZSWIM8-223ENST00000605216 PRKRIP1Q9H875 184 aaPredicted RBP20.29■□□□□ 0.84
ZSWIM8-223ENST00000605216 CBFA2T2O43439 604 aa20.28■□□□□ 0.84
ZSWIM8-223ENST00000605216 DHX37Q8IY37 1157 aaKnown RBP20.28■□□□□ 0.84
ZSWIM8-223ENST00000605216 CEBPZQ03701 1054 aaKnown RBP20.27■□□□□ 0.84
ZSWIM8-223ENST00000605216 TAF3Q5VWG9 929 aa20.27■□□□□ 0.84
ZSWIM8-223ENST00000605216 FAM193AP78312 1265 aa20.27■□□□□ 0.83
ZSWIM8-223ENST00000605216 SEPT11Q9NVA2 429 aaKnown RBP20.27■□□□□ 0.83
ZSWIM8-223ENST00000605216 FIBPO43427 364 aa20.26■□□□□ 0.83
ZSWIM8-223ENST00000605216 CCDC192P0DO97 292 aa20.26■□□□□ 0.83
ZSWIM8-223ENST00000605216 NEK4P51957 841 aa20.25■□□□□ 0.83
ZSWIM8-223ENST00000605216 RBM10P98175 930 aaKnown RBP20.25■□□□□ 0.83
ZSWIM8-223ENST00000605216 GNL3LQ9NVN8 582 aaKnown RBP20.25■□□□□ 0.83
ZSWIM8-223ENST00000605216 CCDC91Q7Z6B0 441 aa20.25■□□□□ 0.83
ZSWIM8-223ENST00000605216 GNAI3P08754 354 aa20.25■□□□□ 0.83
ZSWIM8-223ENST00000605216 TTC39AQ5SRH9 613 aa20.25■□□□□ 0.83
ZSWIM8-223ENST00000605216 TRIM22Q8IYM9 498 aa20.25■□□□□ 0.83
ZSWIM8-223ENST00000605216 STK11IPQ8N1F8 1099 aa20.25■□□□□ 0.83
ZSWIM8-223ENST00000605216 ATP2B2Q01814 1243 aa20.25■□□□□ 0.83
ZSWIM8-223ENST00000605216 KIF6Q6ZMV9 814 aa20.25■□□□□ 0.83
ZSWIM8-223ENST00000605216 LRRCC1Q9C099 1032 aa20.24■□□□□ 0.83
ZSWIM8-223ENST00000605216 SOGA3Q5TF21 947 aa20.24■□□□□ 0.83
ZSWIM8-223ENST00000605216 JAKMIP3Q5VZ66 844 aa20.24■□□□□ 0.83
ZSWIM8-223ENST00000605216 SURF6O75683 361 aaKnown RBP20.24■□□□□ 0.83
ZSWIM8-223ENST00000605216 ERC1Q8IUD2 1116 aa20.23■□□□□ 0.83
ZSWIM8-223ENST00000605216 CCDC18Q5T9S5 1454 aa20.23■□□□□ 0.83
ZSWIM8-223ENST00000605216 AEBP1Q8IUX7 1158 aa20.23■□□□□ 0.83
ZSWIM8-223ENST00000605216 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.23■□□□□ 0.837e-7■■■■■ 31.5
ZSWIM8-223ENST00000605216 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.23■□□□□ 0.831e-8■□□□□ 10.6
ZSWIM8-223ENST00000605216 TNMDQ9H2S6 317 aa20.23■□□□□ 0.83
ZSWIM8-223ENST00000605216 CCDC158Q5M9N0 1113 aa20.23■□□□□ 0.83
ZSWIM8-223ENST00000605216 SLC26A8Q96RN1 970 aa20.23■□□□□ 0.83
ZSWIM8-223ENST00000605216 NLRP2Q9NX02 1062 aa20.22■□□□□ 0.83
ZSWIM8-223ENST00000605216 TAF4BQ92750 862 aa20.22■□□□□ 0.83
ZSWIM8-223ENST00000605216 NOL7Q9UMY1 257 aaKnown RBP20.22■□□□□ 0.83
ZSWIM8-223ENST00000605216 LRRFIP2Q9Y608 721 aaKnown RBP20.22■□□□□ 0.83
ZSWIM8-223ENST00000605216 HMOX1P09601 288 aa20.22■□□□□ 0.83
ZSWIM8-223ENST00000605216 USP47Q96K76 1375 aa20.22■□□□□ 0.83
ZSWIM8-223ENST00000605216 CCDC57Q2TAC2 916 aa20.21■□□□□ 0.83
ZSWIM8-223ENST00000605216 BMP2KQ9NSY1 1161 aaPredicted RBP20.21■□□□□ 0.83
ZSWIM8-223ENST00000605216 CCDC69A6NI79 296 aa20.21■□□□□ 0.83
ZSWIM8-223ENST00000605216 CCDC30Q5VVM6 783 aa20.21■□□□□ 0.83
ZSWIM8-223ENST00000605216 FAM177A1Q8N128 213 aaPredicted RBP20.21■□□□□ 0.83
ZSWIM8-223ENST00000605216 ANKRD1Q15327 319 aa20.21■□□□□ 0.83
ZSWIM8-223ENST00000605216 FAM177BA6PVY3 158 aa20.2■□□□□ 0.82
ZSWIM8-223ENST00000605216 NACAP1Q9BZK3 213 aa20.2■□□□□ 0.82
ZSWIM8-223ENST00000605216 ME1P48163 572 aa20.2■□□□□ 0.82
ZSWIM8-223ENST00000605216 PHF23Q9BUL5 403 aaPredicted RBP20.2■□□□□ 0.82
ZSWIM8-223ENST00000605216 CCDC102AQ96A19 550 aa20.2■□□□□ 0.82
ZSWIM8-223ENST00000605216 PANK1Q8TE04 598 aa20.19■□□□□ 0.82
ZSWIM8-223ENST00000605216 SOGA1O94964 1423 aa20.19■□□□□ 0.82
ZSWIM8-223ENST00000605216 TRIM21P19474 475 aaKnown RBP20.19■□□□□ 0.82
ZSWIM8-223ENST00000605216 GIMAP7Q8NHV1 300 aa20.19■□□□□ 0.82
ZSWIM8-223ENST00000605216 CNNM1Q9NRU3 951 aa20.19■□□□□ 0.82
ZSWIM8-223ENST00000605216 MATR3P43243 847 aaKnown RBP eCLIP20.19■□□□□ 0.82
ZSWIM8-223ENST00000605216 STAMBPO95630 424 aa20.19■□□□□ 0.82
ZSWIM8-223ENST00000605216 CYP46A1Q9Y6A2 500 aa20.19■□□□□ 0.82
ZSWIM8-223ENST00000605216 MPHOSPH10O00566 681 aaKnown RBP20.18■□□□□ 0.82
ZSWIM8-223ENST00000605216 POTEJP0CG39 1038 aa20.17■□□□□ 0.82
ZSWIM8-223ENST00000605216 SSR1P43307 286 aaKnown RBP20.17■□□□□ 0.82
ZSWIM8-223ENST00000605216 NF2P35240 595 aa20.17■□□□□ 0.82
ZSWIM8-223ENST00000605216 MAP2K1Q02750 393 aaPredicted RBP20.17■□□□□ 0.82
ZSWIM8-223ENST00000605216 ATF3P18847 181 aa20.17■□□□□ 0.82
ZSWIM8-223ENST00000605216 CETN2P41208 172 aa20.17■□□□□ 0.82
ZSWIM8-223ENST00000605216 GOLGA6L10A0A0M3HER8 536 aa20.15■□□□□ 0.82
ZSWIM8-223ENST00000605216 KIAA1328Q86T90 577 aa20.15■□□□□ 0.82
ZSWIM8-223ENST00000605216 SSBP05455 408 aaKnown RBP eCLIP20.15■□□□□ 0.82
ZSWIM8-223ENST00000605216 PKNOX2Q96KN3 472 aa20.15■□□□□ 0.82
ZSWIM8-223ENST00000605216 KRT85P78386 507 aa20.15■□□□□ 0.82
ZSWIM8-223ENST00000605216 STK3Q13188 491 aa20.15■□□□□ 0.82
ZSWIM8-223ENST00000605216 CCDC148Q8NFR7 591 aa20.15■□□□□ 0.82
ZSWIM8-223ENST00000605216 WDR33Q9C0J8 1336 aaKnown RBP20.15■□□□□ 0.82
ZSWIM8-223ENST00000605216 DNAI2Q9GZS0 605 aa20.14■□□□□ 0.82
ZSWIM8-223ENST00000605216 NUP133Q8WUM0 1156 aa20.14■□□□□ 0.81
ZSWIM8-223ENST00000605216 MIA2Q96PC5 1412 aa20.13■□□□□ 0.81
ZSWIM8-223ENST00000605216 EPB41L2O43491 1005 aaKnown RBP20.13■□□□□ 0.81
ZSWIM8-223ENST00000605216 CDKL5O76039 1030 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms