RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 RBM6P78332 1123 aaKnown RBP15.3■□□□□ 0.04
TUBE1-210ENST00000604967 SRPK2P78362 688 aaKnown RBP15.3■□□□□ 0.04
TUBE1-210ENST00000604967 PPIP5K1Q6PFW1 1433 aa15.3■□□□□ 0.04
TUBE1-210ENST00000604967 GLI3P10071 1580 aa15.29■□□□□ 0.04
TUBE1-210ENST00000604967 NUTM2GQ5VZR2 741 aa15.29■□□□□ 0.04
TUBE1-210ENST00000604967 CABP1Q9NZU7 370 aa15.29■□□□□ 0.04
TUBE1-210ENST00000604967 PLCH1Q4KWH8 1693 aa15.28■□□□□ 0.04
TUBE1-210ENST00000604967 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.28■□□□□ 0.04
TUBE1-210ENST00000604967 SSH2Q76I76 1423 aa15.27■□□□□ 0.04
TUBE1-210ENST00000604967 PAK3O75914 559 aaPredicted RBP15.27■□□□□ 0.04
TUBE1-210ENST00000604967 CARD11Q9BXL7 1154 aa15.27■□□□□ 0.04
TUBE1-210ENST00000604967 TRPC5Q9UL62 973 aaPredicted RBP15.27■□□□□ 0.04
TUBE1-210ENST00000604967 PHRF1Q9P1Y6 1649 aaKnown RBP15.26■□□□□ 0.03
TUBE1-210ENST00000604967 UNC5CLQ8IV45 518 aa15.26■□□□□ 0.03
TUBE1-210ENST00000604967 NRAPQ86VF7 1730 aa15.26■□□□□ 0.03
TUBE1-210ENST00000604967 UPF1Q92900 1129 aaKnown RBP eCLIP15.25■□□□□ 0.03
TUBE1-210ENST00000604967 TESK2Q96S53 571 aa15.25■□□□□ 0.03
TUBE1-210ENST00000604967 SBNO2Q9Y2G9 1366 aa15.24■□□□□ 0.03
TUBE1-210ENST00000604967 EVC2Q86UK5 1308 aa15.24■□□□□ 0.03
TUBE1-210ENST00000604967 GJD4Q96KN9 370 aaPredicted RBP15.24■□□□□ 0.03
TUBE1-210ENST00000604967 CD163L1Q9NR16 1453 aa15.24■□□□□ 0.03
TUBE1-210ENST00000604967 USP6P35125 1406 aa15.24■□□□□ 0.03
TUBE1-210ENST00000604967 EP400Q96L91 3159 aa15.23■□□□□ 0.03
TUBE1-210ENST00000604967 NRKQ7Z2Y5 1582 aa15.23■□□□□ 0.03
TUBE1-210ENST00000604967 NWD2Q9ULI1 1742 aa15.23■□□□□ 0.03
TUBE1-210ENST00000604967 USP19O94966 1318 aa15.22■□□□□ 0.03
TUBE1-210ENST00000604967 CPSF1Q10570 1443 aaKnown RBP15.22■□□□□ 0.03
TUBE1-210ENST00000604967 KIAA0232Q92628 1395 aa15.22■□□□□ 0.03
TUBE1-210ENST00000604967 PIK3C2AO00443 1686 aa15.22■□□□□ 0.03
TUBE1-210ENST00000604967 HAP1P54257 671 aaPredicted RBP15.21■□□□□ 0.03
TUBE1-210ENST00000604967 CHRNA2Q15822 529 aa15.21■□□□□ 0.03
TUBE1-210ENST00000604967 VPS72Q15906 364 aa15.21■□□□□ 0.03
TUBE1-210ENST00000604967 COL14A1Q05707 1796 aaKnown RBP15.21■□□□□ 0.02
TUBE1-210ENST00000604967 ST20-MTHFSA0A0A6YYL1 179 aa15.2■□□□□ 0.02
TUBE1-210ENST00000604967 BTG4Q9NY30 223 aa15.2■□□□□ 0.02
TUBE1-210ENST00000604967 AKAP12Q02952 1782 aa15.19■□□□□ 0.02
TUBE1-210ENST00000604967 ZC3H6P61129 1189 aaKnown RBP15.19■□□□□ 0.02
TUBE1-210ENST00000604967 ABTB2Q8N961 1025 aa15.19■□□□□ 0.02
TUBE1-210ENST00000604967 ZRANB1Q9UGI0 708 aa15.18■□□□□ 0.02
TUBE1-210ENST00000604967 SLIT3O75094 1523 aa15.17■□□□□ 0.02
TUBE1-210ENST00000604967 LMO7Q8WWI1 1683 aa15.17■□□□□ 0.02
TUBE1-210ENST00000604967 CAMTA1Q9Y6Y1 1673 aa15.17■□□□□ 0.02
TUBE1-210ENST00000604967 SLC12A5Q9H2X9 1139 aa15.17■□□□□ 0.02
TUBE1-210ENST00000604967 PRDM11Q9NQV5 511 aa15.17■□□□□ 0.02
TUBE1-210ENST00000604967 BRWD3Q6RI45 1802 aa15.17■□□□□ 0.02
TUBE1-210ENST00000604967 TTC21BQ7Z4L5 1316 aa15.17■□□□□ 0.02
TUBE1-210ENST00000604967 ATAD2Q6PL18 1390 aa15.16■□□□□ 0.02
TUBE1-210ENST00000604967 ONECUT3O60422 494 aaPredicted RBP15.16■□□□□ 0.02
TUBE1-210ENST00000604967 MON2Q7Z3U7 1717 aa15.15■□□□□ 0.02
TUBE1-210ENST00000604967 CPDO75976 1380 aa15.15■□□□□ 0.02
TUBE1-210ENST00000604967 GCP02774 474 aa15.15■□□□□ 0.02
TUBE1-210ENST00000604967 CLSPNQ9HAW4 1339 aa15.15■□□□□ 0.02
TUBE1-210ENST00000604967 BRD4O60885 1362 aaPredicted RBP15.14■□□□□ 0.01
TUBE1-210ENST00000604967 USP47Q96K76 1375 aa15.14■□□□□ 0.01
TUBE1-210ENST00000604967 SEPT12Q8IYM1 358 aa15.14■□□□□ 0.01
TUBE1-210ENST00000604967 SPATA31A5Q5VU36 1347 aa15.14■□□□□ 0.01
TUBE1-210ENST00000604967 SPATA31A7Q8IWB4 1347 aa15.14■□□□□ 0.01
TUBE1-210ENST00000604967 NLRP6P59044 892 aa15.13■□□□□ 0.01
TUBE1-210ENST00000604967 COL18A1P39060 1754 aa15.13■□□□□ 0.01
TUBE1-210ENST00000604967 A0A1W2PP64 1363 aa15.12■□□□□ 0.01
TUBE1-210ENST00000604967 KTN1Q86UP2 1357 aaKnown RBP15.12■□□□□ 0.01
TUBE1-210ENST00000604967 FAM98CQ17RN3 349 aaKnown RBP15.12■□□□□ 0.01
TUBE1-210ENST00000604967 NLRP13Q86W25 1043 aa15.12■□□□□ 0.01
TUBE1-210ENST00000604967 NFAT5O94916 1531 aa15.12■□□□□ 0.01
TUBE1-210ENST00000604967 NME9Q86XW9 330 aa15.11■□□□□ 0.01
TUBE1-210ENST00000604967 THSD7AQ9UPZ6 1657 aa15.11■□□□□ 0.01
TUBE1-210ENST00000604967 SPATA31A1Q5TZJ5 1347 aa15.11■□□□□ 0.01
TUBE1-210ENST00000604967 LARP1Q6PKG0 1096 aaKnown RBP15.1■□□□□ 0.01
TUBE1-210ENST00000604967 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.1■□□□□ 0.01
TUBE1-210ENST00000604967 TMC1Q8TDI8 760 aa15.1■□□□□ 0.01
TUBE1-210ENST00000604967 ZNF692Q9BU19 519 aaPredicted RBP15.1■□□□□ 0.01
TUBE1-210ENST00000604967 STRN4Q9NRL3 753 aa15.1■□□□□ 0.01
TUBE1-210ENST00000604967 AXIN2Q9Y2T1 843 aa15.1■□□□□ 0.01
TUBE1-210ENST00000604967 CCDC9Q9Y3X0 531 aaKnown RBP15.1■□□□□ 0.01
TUBE1-210ENST00000604967 COL5A2P05997 1499 aaPredicted RBP15.09■□□□□ 0.01
TUBE1-210ENST00000604967 PUS7Q96PZ0 661 aaKnown RBP15.09■□□□□ 0.01
TUBE1-210ENST00000604967 TIMELESSQ9UNS1 1208 aa15.09■□□□□ 0.01
TUBE1-210ENST00000604967 FAM182BQ5T319 152 aa15.08■□□□□ 0
TUBE1-210ENST00000604967 ARHGEF25Q86VW2 580 aa15.08■□□□□ 0
TUBE1-210ENST00000604967 CCER1Q8TC90 406 aaPredicted RBP15.08■□□□□ 0
TUBE1-210ENST00000604967 USP54Q70EL1 1684 aa15.08■□□□□ 0
TUBE1-210ENST00000604967 TTC21AQ8NDW8 1320 aa15.08■□□□□ 0
TUBE1-210ENST00000604967 USP31Q70CQ4 1352 aa15.08■□□□□ 0
TUBE1-210ENST00000604967 AATKQ6ZMQ8 1374 aa15.07■□□□□ 0
TUBE1-210ENST00000604967 SOX12O15370 315 aa15.06■□□□□ 0
TUBE1-210ENST00000604967 EDC4Q6P2E9 1401 aaKnown RBP15.06■□□□□ 0
TUBE1-210ENST00000604967 ZBTB7CA1YPR0 619 aa15.05■□□□□ -0
TUBE1-210ENST00000604967 KRT27Q7Z3Y8 459 aa15.05■□□□□ -0
TUBE1-210ENST00000604967 USP35Q9P2H5 1018 aa15.05■□□□□ -0
TUBE1-210ENST00000604967 OVOS2A0A0J9YW53 1432 aa15.05■□□□□ -0
TUBE1-210ENST00000604967 OVOS2Q6IE36 1432 aa15.05■□□□□ -0
TUBE1-210ENST00000604967 RGPD5Q99666 1765 aa15.04■□□□□ -0
TUBE1-210ENST00000604967 FBLN1P23142 703 aa15.04■□□□□ -0
TUBE1-210ENST00000604967 MYOM1P52179 1685 aa15.03■□□□□ -0
TUBE1-210ENST00000604967 EVA1CP58658 441 aa15.01□□□□□ -0.01
TUBE1-210ENST00000604967 BARGINQ6ZT62 677 aa15.01□□□□□ -0.01
TUBE1-210ENST00000604967 HDGFL2Q7Z4V5 671 aaPredicted RBP15.01□□□□□ -0.01
TUBE1-210ENST00000604967 DEFB132Q7Z7B7 95 aa15.01□□□□□ -0.01
TUBE1-210ENST00000604967 CARD14Q9BXL6 1004 aa15.01□□□□□ -0.01
TUBE1-210ENST00000604967 TERF2IPQ9NYB0 399 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms