RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 SYMPKQ92797 1274 aaKnown RBP7.93□□□□□ -1.14
TUBE1-209ENST00000604814 GLMNQ92990 594 aa7.93□□□□□ -1.14
TUBE1-209ENST00000604814 RBM47A0AV96 593 aaKnown RBP7.92□□□□□ -1.14
TUBE1-209ENST00000604814 CSPP1Q1MSJ5 1256 aa7.92□□□□□ -1.14
TUBE1-209ENST00000604814 RSBN1LQ6PCB5 846 aaPredicted RBP7.92□□□□□ -1.14
TUBE1-209ENST00000604814 PROCA1Q8NCQ7 364 aaPredicted RBP7.92□□□□□ -1.14
TUBE1-209ENST00000604814 PCDHGC3Q9UN70 934 aa7.92□□□□□ -1.14
TUBE1-209ENST00000604814 SMARCA5O60264 1052 aaPredicted RBP7.92□□□□□ -1.14
TUBE1-209ENST00000604814 USB1Q9BQ65 265 aaKnown RBP7.92□□□□□ -1.14
TUBE1-209ENST00000604814 SNRKQ9NRH2 765 aa7.92□□□□□ -1.14
TUBE1-209ENST00000604814 POLR3EQ9NVU0 708 aa7.92□□□□□ -1.14
TUBE1-209ENST00000604814 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.91□□□□□ -1.14
TUBE1-209ENST00000604814 SPTLC1O15269 473 aa7.91□□□□□ -1.14
TUBE1-209ENST00000604814 FAM160A2Q8N612 972 aaPredicted RBP7.91□□□□□ -1.14
TUBE1-209ENST00000604814 GJA5P36382 358 aa7.9□□□□□ -1.14
TUBE1-209ENST00000604814 WWC1Q8IX03 1113 aa7.9□□□□□ -1.14
TUBE1-209ENST00000604814 UBE2Q2Q8WVN8 375 aa7.9□□□□□ -1.14
TUBE1-209ENST00000604814 PCDHB15Q9Y5E8 787 aa7.9□□□□□ -1.14
TUBE1-209ENST00000604814 PPEF1O14829 653 aaPredicted RBP7.89□□□□□ -1.15
TUBE1-209ENST00000604814 MRRFQ96E11 262 aaKnown RBP7.89□□□□□ -1.15
TUBE1-209ENST00000604814 GDPD2Q9HCC8 539 aa7.89□□□□□ -1.15
TUBE1-209ENST00000604814 KIAA1522Q9P206 1035 aaPredicted RBP7.89□□□□□ -1.15
TUBE1-209ENST00000604814 LIMD1Q9UGP4 676 aa7.89□□□□□ -1.15
TUBE1-209ENST00000604814 RNF223E7ERA6 249 aa7.89□□□□□ -1.15
TUBE1-209ENST00000604814 RFX1P22670 979 aa7.89□□□□□ -1.15
TUBE1-209ENST00000604814 CLK2P49760 499 aaKnown RBP7.89□□□□□ -1.15
TUBE1-209ENST00000604814 MTMR2Q13614 643 aa7.89□□□□□ -1.15
TUBE1-209ENST00000604814 RETREG3Q86VR2 466 aa7.89□□□□□ -1.15
TUBE1-209ENST00000604814 POM121CA8CG34 1229 aa7.88□□□□□ -1.15
TUBE1-209ENST00000604814 MSS51Q4VC12 460 aa7.88□□□□□ -1.15
TUBE1-209ENST00000604814 SPATA32Q96LK8 384 aa7.88□□□□□ -1.15
TUBE1-209ENST00000604814 PRDM9Q9NQV7 894 aa7.88□□□□□ -1.15
TUBE1-209ENST00000604814 ARID4BQ4LE39 1312 aaPredicted RBP7.88□□□□□ -1.15
TUBE1-209ENST00000604814 NUTM2BA6NNL0 878 aaPredicted RBP7.87□□□□□ -1.15
TUBE1-209ENST00000604814 NUTM2EB1AL46 878 aaPredicted RBP7.87□□□□□ -1.15
TUBE1-209ENST00000604814 NUTM2DQ5VT03 806 aaPredicted RBP7.87□□□□□ -1.15
TUBE1-209ENST00000604814 NUTM2AQ8IVF1 878 aaPredicted RBP7.87□□□□□ -1.15
TUBE1-209ENST00000604814 ZBTB3Q9H5J0 574 aa7.87□□□□□ -1.15
TUBE1-209ENST00000604814 BANK1Q8NDB2 785 aa7.87□□□□□ -1.15
TUBE1-209ENST00000604814 DRC1Q96MC2 740 aa7.87□□□□□ -1.15
TUBE1-209ENST00000604814 ANKLE1Q8NAG6 615 aa7.86□□□□□ -1.15
TUBE1-209ENST00000604814 CABLES1Q8TDN4 633 aa7.86□□□□□ -1.15
TUBE1-209ENST00000604814 PRPF38BQ5VTL8 546 aaKnown RBP7.85□□□□□ -1.15
TUBE1-209ENST00000604814 PRR7Q8TB68 274 aa7.85□□□□□ -1.15
TUBE1-209ENST00000604814 RGS20O76081 388 aa7.84□□□□□ -1.15
TUBE1-209ENST00000604814 ABL2P42684 1182 aa7.84□□□□□ -1.15
TUBE1-209ENST00000604814 QPCTQ16769 361 aa7.84□□□□□ -1.15
TUBE1-209ENST00000604814 VRTNQ9H8Y1 702 aa7.84□□□□□ -1.15
TUBE1-209ENST00000604814 FCF1Q9Y324 198 aaKnown RBP7.84□□□□□ -1.15
TUBE1-209ENST00000604814 JUNDP17535 347 aa7.84□□□□□ -1.15
TUBE1-209ENST00000604814 TUSC1Q2TAM9 212 aa7.84□□□□□ -1.15
TUBE1-209ENST00000604814 SREK1Q8WXA9 508 aaKnown RBP7.84□□□□□ -1.15
TUBE1-209ENST00000604814 TSC1Q92574 1164 aa7.84□□□□□ -1.15
TUBE1-209ENST00000604814 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.84□□□□□ -1.15
TUBE1-209ENST00000604814 PRKD2Q9BZL6 878 aa7.84□□□□□ -1.15
TUBE1-209ENST00000604814 DXOO77932 396 aaKnown RBP7.83□□□□□ -1.16
TUBE1-209ENST00000604814 NCLP19338 710 aaKnown RBP7.83□□□□□ -1.16
TUBE1-209ENST00000604814 MMP16P51512 607 aa7.83□□□□□ -1.16
TUBE1-209ENST00000604814 TXNDC2Q86VQ3 553 aa7.83□□□□□ -1.16
TUBE1-209ENST00000604814 CCDC24Q8N4L8 307 aa7.83□□□□□ -1.16
TUBE1-209ENST00000604814 LILRB3O75022 631 aa7.82□□□□□ -1.16
TUBE1-209ENST00000604814 TCF3P15923 654 aa7.82□□□□□ -1.16
TUBE1-209ENST00000604814 RFC5P40937 340 aa7.82□□□□□ -1.16
TUBE1-209ENST00000604814 CERS3Q8IU89 383 aa7.82□□□□□ -1.16
TUBE1-209ENST00000604814 ANKRD13AQ8IZ07 590 aa7.82□□□□□ -1.16
TUBE1-209ENST00000604814 CFAP99D6REC4 459 aa7.81□□□□□ -1.16
TUBE1-209ENST00000604814 SLC19A1P41440 591 aa7.81□□□□□ -1.16
TUBE1-209ENST00000604814 RTL5Q5HYW3 569 aaPredicted RBP7.81□□□□□ -1.16
TUBE1-209ENST00000604814 CFAP70Q5T0N1 1121 aa7.81□□□□□ -1.16
TUBE1-209ENST00000604814 ZBTB24O43167 697 aaPredicted RBP7.8□□□□□ -1.16
TUBE1-209ENST00000604814 SRPK2P78362 688 aaKnown RBP7.8□□□□□ -1.16
TUBE1-209ENST00000604814 MTMR14Q8NCE2 650 aa7.8□□□□□ -1.16
TUBE1-209ENST00000604814 PLA2G2CQ5R387 149 aa7.79□□□□□ -1.16
TUBE1-209ENST00000604814 NUDT12Q9BQG2 462 aa7.79□□□□□ -1.16
TUBE1-209ENST00000604814 V9GY48 417 aaPredicted RBP7.79□□□□□ -1.16
TUBE1-209ENST00000604814 DESI1Q6ICB0 168 aa7.79□□□□□ -1.16
TUBE1-209ENST00000604814 C8orf37Q96NL8 207 aa7.79□□□□□ -1.16
TUBE1-209ENST00000604814 GNEQ9Y223 722 aaKnown RBP7.79□□□□□ -1.16
TUBE1-209ENST00000604814 CADPSQ9ULU8 1353 aa7.78□□□□□ -1.16
TUBE1-209ENST00000604814 ZNF16P17020 682 aaPredicted RBP7.78□□□□□ -1.16
TUBE1-209ENST00000604814 LIAT1Q6ZQX7 453 aa7.78□□□□□ -1.16
TUBE1-209ENST00000604814 HELBQ8NG08 1087 aaPredicted RBP7.78□□□□□ -1.16
TUBE1-209ENST00000604814 PPP1R1BQ9UD71 204 aaPredicted RBP7.78□□□□□ -1.16
TUBE1-209ENST00000604814 PTPRNQ16849 979 aa7.77□□□□□ -1.17
TUBE1-209ENST00000604814 TMEM259Q4ZIN3 620 aa7.77□□□□□ -1.17
TUBE1-209ENST00000604814 HDGFL1Q5TGJ6 251 aa7.77□□□□□ -1.17
TUBE1-209ENST00000604814 ANKRD62A6NC57 917 aa7.76□□□□□ -1.17
TUBE1-209ENST00000604814 TMEM88BA6NKF7 163 aa7.76□□□□□ -1.17
TUBE1-209ENST00000604814 CCNYL3P0C7X3 344 aa7.76□□□□□ -1.17
TUBE1-209ENST00000604814 ZNF592Q92610 1267 aa7.76□□□□□ -1.17
TUBE1-209ENST00000604814 PSMD1Q99460 953 aa7.76□□□□□ -1.17
TUBE1-209ENST00000604814 PRM3Q9NNZ6 103 aa7.76□□□□□ -1.17
TUBE1-209ENST00000604814 TBC1D2BQ9UPU7 963 aa7.76□□□□□ -1.17
TUBE1-209ENST00000604814 CD2BP2O95400 341 aaKnown RBP7.76□□□□□ -1.17
TUBE1-209ENST00000604814 ERCC3P19447 782 aa7.76□□□□□ -1.17
TUBE1-209ENST00000604814 CTHP32929 405 aa7.76□□□□□ -1.17
TUBE1-209ENST00000604814 LYPD8Q6UX82 237 aa7.76□□□□□ -1.17
TUBE1-209ENST00000604814 EMID1Q96A84 441 aaPredicted RBP7.76□□□□□ -1.17
TUBE1-209ENST00000604814 RPIAP49247 311 aa7.75□□□□□ -1.17
TUBE1-209ENST00000604814 SPRYD7Q5W111 196 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms