RNA–Protein interactions for RNA: ENST00000604440.5

SH3D19-212, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-212ENST00000604440 GPATCH8Q9UKJ3 1502 aaKnown RBP13.76□□□□□ -0.21
SH3D19-212ENST00000604440 NCOA2Q15596 1464 aa13.76□□□□□ -0.21
SH3D19-212ENST00000604440 ZNF335Q9H4Z2 1342 aaPredicted RBP13.76□□□□□ -0.21
SH3D19-212ENST00000604440 WDR70Q9NW82 654 aa13.76□□□□□ -0.21
SH3D19-212ENST00000604440 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.76□□□□□ -0.21
SH3D19-212ENST00000604440 ADGBQ8N7X0 1667 aa13.75□□□□□ -0.21
SH3D19-212ENST00000604440 PACS2Q86VP3 889 aa13.75□□□□□ -0.21
SH3D19-212ENST00000604440 LRCH3Q96II8 777 aa13.75□□□□□ -0.21
SH3D19-212ENST00000604440 ESF1Q9H501 851 aaKnown RBP13.75□□□□□ -0.21
SH3D19-212ENST00000604440 DNMT1P26358 1616 aaKnown RBP13.75□□□□□ -0.21
SH3D19-212ENST00000604440 NEURL4Q96JN8 1562 aa13.75□□□□□ -0.21
SH3D19-212ENST00000604440 MAP3K1Q13233 1512 aa13.74□□□□□ -0.21
SH3D19-212ENST00000604440 CDCA7LQ96GN5 454 aa13.74□□□□□ -0.21
SH3D19-212ENST00000604440 FAM198AQ9UFP1 575 aa13.74□□□□□ -0.21
SH3D19-212ENST00000604440 KIAA1107Q9UPP5 1409 aa13.73□□□□□ -0.21
SH3D19-212ENST00000604440 GRXCR2A6NFK2 248 aa13.73□□□□□ -0.21
SH3D19-212ENST00000604440 TSR3Q9UJK0 312 aaKnown RBP13.73□□□□□ -0.21
SH3D19-212ENST00000604440 HPS5Q9UPZ3 1129 aa13.73□□□□□ -0.21
SH3D19-212ENST00000604440 A2MP01023 1474 aa13.73□□□□□ -0.21
SH3D19-212ENST00000604440 PRSS12P56730 875 aa13.72□□□□□ -0.21
SH3D19-212ENST00000604440 CFDP1Q9UEE9 299 aaPredicted RBP13.72□□□□□ -0.21
SH3D19-212ENST00000604440 CPS1P31327 1500 aa13.72□□□□□ -0.21
SH3D19-212ENST00000604440 FAM135AQ9P2D6 1515 aa13.72□□□□□ -0.21
SH3D19-212ENST00000604440 A2ML1A8K2U0 1454 aa13.72□□□□□ -0.21
SH3D19-212ENST00000604440 PLEKHH2Q8IVE3 1493 aa13.71□□□□□ -0.21
SH3D19-212ENST00000604440 OSBPP22059 807 aa13.7□□□□□ -0.22
SH3D19-212ENST00000604440 ALKQ9UM73 1620 aa13.7□□□□□ -0.22
SH3D19-212ENST00000604440 ZNF644Q9H582 1327 aaPredicted RBP13.69□□□□□ -0.22
SH3D19-212ENST00000604440 UBAP1LF5GYI3 381 aa13.69□□□□□ -0.22
SH3D19-212ENST00000604440 C3orf80F5H4A9 247 aa13.69□□□□□ -0.22
SH3D19-212ENST00000604440 PPARGC1BQ86YN6 1023 aaKnown RBP13.69□□□□□ -0.22
SH3D19-212ENST00000604440 CDHR5Q9HBB8 845 aa13.69□□□□□ -0.22
SH3D19-212ENST00000604440 SMAPO00193 183 aa13.68□□□□□ -0.22
SH3D19-212ENST00000604440 SPAG9O60271 1321 aaKnown RBP13.67□□□□□ -0.22
SH3D19-212ENST00000604440 VWDEQ8N2E2 1590 aa13.67□□□□□ -0.22
SH3D19-212ENST00000604440 HNRNPMP52272 730 aaKnown RBP eCLIP13.67□□□□□ -0.222e-7■■■□□ 16.6
SH3D19-212ENST00000604440 DEPDC5O75140 1603 aa13.66□□□□□ -0.22
SH3D19-212ENST00000604440 KCNC4Q03721 635 aa13.66□□□□□ -0.22
SH3D19-212ENST00000604440 NBPF26B4DH59 902 aa13.65□□□□□ -0.22
SH3D19-212ENST00000604440 CAMSAP2Q08AD1 1489 aa13.65□□□□□ -0.22
SH3D19-212ENST00000604440 SHANK2Q9UPX8 1470 aa13.64□□□□□ -0.23
SH3D19-212ENST00000604440 SAMD7Q7Z3H4 446 aa13.64□□□□□ -0.23
SH3D19-212ENST00000604440 RBM27Q9P2N5 1060 aaKnown RBP13.64□□□□□ -0.23
SH3D19-212ENST00000604440 KDM5DQ9BY66 1539 aa13.64□□□□□ -0.23
SH3D19-212ENST00000604440 MYOM3Q5VTT5 1437 aa13.64□□□□□ -0.23
SH3D19-212ENST00000604440 MED14O60244 1454 aa13.63□□□□□ -0.23
SH3D19-212ENST00000604440 PZPP20742 1482 aa13.63□□□□□ -0.23
SH3D19-212ENST00000604440 TATDN2Q93075 761 aa13.63□□□□□ -0.23
SH3D19-212ENST00000604440 IRX2Q9BZI1 471 aaPredicted RBP13.63□□□□□ -0.23
SH3D19-212ENST00000604440 RTEL1-TNFRSF6BF6WH68 1400 aa13.63□□□□□ -0.23
SH3D19-212ENST00000604440 SYNMO15061 1565 aa13.62□□□□□ -0.23
SH3D19-212ENST00000604440 MBD5Q9P267 1494 aa13.62□□□□□ -0.23
SH3D19-212ENST00000604440 PNMA3Q9UL41 463 aa13.62□□□□□ -0.23
SH3D19-212ENST00000604440 HSPA1LP34931 641 aa13.61□□□□□ -0.23
SH3D19-212ENST00000604440 RNF17Q9BXT8 1623 aaKnown RBP13.61□□□□□ -0.23
SH3D19-212ENST00000604440 STRCP1A6NGW2 1772 aa13.6□□□□□ -0.23
SH3D19-212ENST00000604440 IQGAP1P46940 1657 aa13.6□□□□□ -0.23
SH3D19-212ENST00000604440 PPP4CP60510 307 aa13.6□□□□□ -0.23
SH3D19-212ENST00000604440 PTPN23Q9H3S7 1636 aa13.59□□□□□ -0.23
SH3D19-212ENST00000604440 NLRP1Q9C000 1473 aa13.59□□□□□ -0.23
SH3D19-212ENST00000604440 TNRQ92752 1358 aa13.58□□□□□ -0.23
SH3D19-212ENST00000604440 ZC3H13Q5T200 1668 aaKnown RBP13.57□□□□□ -0.24
SH3D19-212ENST00000604440 CCDC141Q6ZP82 1450 aa13.57□□□□□ -0.24
SH3D19-212ENST00000604440 NUDT18Q6ZVK8 323 aa13.57□□□□□ -0.24
SH3D19-212ENST00000604440 TTC13Q8NBP0 860 aa13.57□□□□□ -0.24
SH3D19-212ENST00000604440 NPDC1Q9NQX5 325 aaPredicted RBP13.57□□□□□ -0.24
SH3D19-212ENST00000604440 DHX29Q7Z478 1369 aaKnown RBP13.57□□□□□ -0.24
SH3D19-212ENST00000604440 FGD6Q6ZV73 1430 aa13.56□□□□□ -0.24
SH3D19-212ENST00000604440 MIA2Q96PC5 1412 aa13.56□□□□□ -0.24
SH3D19-212ENST00000604440 TOM1O60784 492 aa13.56□□□□□ -0.24
SH3D19-212ENST00000604440 GGT6Q6P531 493 aa13.56□□□□□ -0.24
SH3D19-212ENST00000604440 UGGT1Q9NYU2 1555 aa13.56□□□□□ -0.24
SH3D19-212ENST00000604440 TJAP1Q5JTD0 557 aa13.55□□□□□ -0.24
SH3D19-212ENST00000604440 ARHGEF5Q12774 1597 aa13.54□□□□□ -0.24
SH3D19-212ENST00000604440 PADI6Q6TGC4 694 aa13.54□□□□□ -0.24
SH3D19-212ENST00000604440 TSHZ2Q9NRE2 1034 aa13.54□□□□□ -0.24
SH3D19-212ENST00000604440 NPHP4O75161 1426 aaPredicted RBP13.54□□□□□ -0.24
SH3D19-212ENST00000604440 LRRC7Q96NW7 1537 aa13.53□□□□□ -0.24
SH3D19-212ENST00000604440 PIP4K2BP78356 416 aa13.52□□□□□ -0.25
SH3D19-212ENST00000604440 FAM50AQ14320 339 aaKnown RBP13.52□□□□□ -0.25
SH3D19-212ENST00000604440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.52□□□□□ -0.25
SH3D19-212ENST00000604440 XIRP1Q702N8 1843 aaKnown RBP13.52□□□□□ -0.25
SH3D19-212ENST00000604440 CROCC2H7BZ55 1655 aa13.51□□□□□ -0.25
SH3D19-212ENST00000604440 KCNV2Q8TDN2 545 aa13.51□□□□□ -0.25
SH3D19-212ENST00000604440 UBR1Q8IWV7 1749 aa13.5□□□□□ -0.25
SH3D19-212ENST00000604440 EIF2AK4Q9P2K8 1649 aaKnown RBP13.5□□□□□ -0.25
SH3D19-212ENST00000604440 FBXO31Q5XUX0 539 aaPredicted RBP13.5□□□□□ -0.25
SH3D19-212ENST00000604440 ARHGEF1Q92888 912 aaKnown RBP13.5□□□□□ -0.25
SH3D19-212ENST00000604440 MTRQ99707 1265 aa13.5□□□□□ -0.25
SH3D19-212ENST00000604440 TSPY4P0CV99 314 aa13.49□□□□□ -0.25
SH3D19-212ENST00000604440 TSPY10P0CW01 314 aa13.49□□□□□ -0.25
SH3D19-212ENST00000604440 MLLT3P42568 568 aaPredicted RBP13.49□□□□□ -0.25
SH3D19-212ENST00000604440 MROH1Q8NDA8 1641 aa13.49□□□□□ -0.25
SH3D19-212ENST00000604440 ABCC3O15438 1527 aa13.49□□□□□ -0.25
SH3D19-212ENST00000604440 ABCC5O15440 1437 aa13.48□□□□□ -0.25
SH3D19-212ENST00000604440 DAPK1P53355 1430 aa13.48□□□□□ -0.25
SH3D19-212ENST00000604440 RNF40O75150 1001 aa13.48□□□□□ -0.25
SH3D19-212ENST00000604440 ANKLE2Q86XL3 938 aa13.48□□□□□ -0.25
SH3D19-212ENST00000604440 MAST1Q9Y2H9 1570 aa13.48□□□□□ -0.25
SH3D19-212ENST00000604440 APLP1P51693 650 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms