RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 ACIN1Q9UKV3 1341 aaKnown RBP17.58■□□□□ 0.4
PDLIM1P1-201ENST00000604187 YY1P25490 414 aa17.58■□□□□ 0.4
PDLIM1P1-201ENST00000604187 MPHOSPH9Q99550 1183 aa17.58■□□□□ 0.4
PDLIM1P1-201ENST00000604187 RGPD1P0DJD0 1748 aa17.58■□□□□ 0.4
PDLIM1P1-201ENST00000604187 HIRIP3Q9BW71 556 aaPredicted RBP17.57■□□□□ 0.4
PDLIM1P1-201ENST00000604187 COL14A1Q05707 1796 aaKnown RBP17.56■□□□□ 0.4
PDLIM1P1-201ENST00000604187 THSD7AQ9UPZ6 1657 aa17.56■□□□□ 0.4
PDLIM1P1-201ENST00000604187 APBA3O96018 575 aa17.56■□□□□ 0.4
PDLIM1P1-201ENST00000604187 FAM196AQ6ZSG2 479 aa17.56■□□□□ 0.4
PDLIM1P1-201ENST00000604187 ADGRB2O60241 1585 aa17.56■□□□□ 0.4
PDLIM1P1-201ENST00000604187 PARD3Q8TEW0 1356 aa17.55■□□□□ 0.4
PDLIM1P1-201ENST00000604187 SPATA31A1Q5TZJ5 1347 aa17.55■□□□□ 0.4
PDLIM1P1-201ENST00000604187 PRR36Q9H6K5 1346 aa17.55■□□□□ 0.4
PDLIM1P1-201ENST00000604187 PAK3O75914 559 aaPredicted RBP17.54■□□□□ 0.4
PDLIM1P1-201ENST00000604187 EIF3AQ14152 1382 aaKnown RBP17.53■□□□□ 0.4
PDLIM1P1-201ENST00000604187 MINK1Q8N4C8 1332 aaPredicted RBP17.53■□□□□ 0.4
PDLIM1P1-201ENST00000604187 DLC1Q96QB1 1528 aa17.53■□□□□ 0.4
PDLIM1P1-201ENST00000604187 STRN4Q9NRL3 753 aa17.53■□□□□ 0.4
PDLIM1P1-201ENST00000604187 KIAA0232Q92628 1395 aa17.53■□□□□ 0.4
PDLIM1P1-201ENST00000604187 TNS1Q9HBL0 1735 aaKnown RBP17.52■□□□□ 0.4
PDLIM1P1-201ENST00000604187 CHRNA2Q15822 529 aa17.52■□□□□ 0.4
PDLIM1P1-201ENST00000604187 NGDNQ8NEJ9 315 aaKnown RBP17.52■□□□□ 0.4
PDLIM1P1-201ENST00000604187 TRPM3Q9HCF6 1732 aaPredicted RBP17.52■□□□□ 0.39
PDLIM1P1-201ENST00000604187 RGPD8O14715 1765 aaPredicted RBP17.51■□□□□ 0.39
PDLIM1P1-201ENST00000604187 USP35Q9P2H5 1018 aa17.51■□□□□ 0.39
PDLIM1P1-201ENST00000604187 TRAK1Q9UPV9 953 aa17.51■□□□□ 0.39
PDLIM1P1-201ENST00000604187 TULP4Q9NRJ4 1543 aa17.5■□□□□ 0.39
PDLIM1P1-201ENST00000604187 ALS2Q96Q42 1657 aa17.49■□□□□ 0.39
PDLIM1P1-201ENST00000604187 NBPF8Q3BBV2 869 aa17.49■□□□□ 0.39
PDLIM1P1-201ENST00000604187 NBPF14Q5TI25 921 aa17.49■□□□□ 0.39
PDLIM1P1-201ENST00000604187 PPP1R1BQ9UD71 204 aaPredicted RBP17.49■□□□□ 0.39
PDLIM1P1-201ENST00000604187 WASLO00401 505 aaPredicted RBP17.48■□□□□ 0.39
PDLIM1P1-201ENST00000604187 PDE3BQ13370 1112 aa17.48■□□□□ 0.39
PDLIM1P1-201ENST00000604187 ZC3H6P61129 1189 aaKnown RBP17.47■□□□□ 0.39
PDLIM1P1-201ENST00000604187 ADGRB1O14514 1584 aa17.47■□□□□ 0.39
PDLIM1P1-201ENST00000604187 SPON1Q9HCB6 807 aa17.46■□□□□ 0.39
PDLIM1P1-201ENST00000604187 SSH2Q76I76 1423 aa17.46■□□□□ 0.39
PDLIM1P1-201ENST00000604187 NUTM2GQ5VZR2 741 aa17.45■□□□□ 0.38
PDLIM1P1-201ENST00000604187 BARGINQ6ZT62 677 aa17.45■□□□□ 0.38
PDLIM1P1-201ENST00000604187 NINLQ9Y2I6 1382 aa17.44■□□□□ 0.38
PDLIM1P1-201ENST00000604187 DCAF8L1A6NGE4 600 aa17.44■□□□□ 0.38
PDLIM1P1-201ENST00000604187 EVA1CP58658 441 aa17.44■□□□□ 0.38
PDLIM1P1-201ENST00000604187 CRYBG1Q9Y4K1 1723 aa17.43■□□□□ 0.38
PDLIM1P1-201ENST00000604187 KCNQ2O43526 872 aa17.42■□□□□ 0.38
PDLIM1P1-201ENST00000604187 LARP1Q6PKG0 1096 aaKnown RBP17.42■□□□□ 0.38
PDLIM1P1-201ENST00000604187 TCP11L2Q8N4U5 519 aa17.42■□□□□ 0.38
PDLIM1P1-201ENST00000604187 ATP7BP35670 1465 aa17.42■□□□□ 0.38
PDLIM1P1-201ENST00000604187 NUDT16Q96DE0 195 aaKnown RBP17.4■□□□□ 0.38
PDLIM1P1-201ENST00000604187 RREB1Q92766 1687 aa17.39■□□□□ 0.37
PDLIM1P1-201ENST00000604187 NUP188Q5SRE5 1749 aa17.39■□□□□ 0.37
PDLIM1P1-201ENST00000604187 CAMTA1Q9Y6Y1 1673 aa17.37■□□□□ 0.37
PDLIM1P1-201ENST00000604187 KDM2AQ9Y2K7 1162 aa17.37■□□□□ 0.37
PDLIM1P1-201ENST00000604187 PHRF1Q9P1Y6 1649 aaKnown RBP17.36■□□□□ 0.37
PDLIM1P1-201ENST00000604187 CPDO75976 1380 aa17.36■□□□□ 0.37
PDLIM1P1-201ENST00000604187 ANO8Q9HCE9 1232 aaPredicted RBP17.35■□□□□ 0.37
PDLIM1P1-201ENST00000604187 THRAP3Q9Y2W1 955 aaKnown RBP17.35■□□□□ 0.37
PDLIM1P1-201ENST00000604187 ACEP12821 1306 aa17.35■□□□□ 0.37
PDLIM1P1-201ENST00000604187 POLR3AO14802 1390 aaPredicted RBP17.35■□□□□ 0.37
PDLIM1P1-201ENST00000604187 NRKQ7Z2Y5 1582 aa17.35■□□□□ 0.37
PDLIM1P1-201ENST00000604187 OVOS2A0A0G2JMS6 1433 aa17.34■□□□□ 0.37
PDLIM1P1-201ENST00000604187 OVOS2A0A0J9YW53 1432 aa17.34■□□□□ 0.37
PDLIM1P1-201ENST00000604187 USP19O94966 1318 aa17.34■□□□□ 0.37
PDLIM1P1-201ENST00000604187 OVOS2Q6IE36 1432 aa17.34■□□□□ 0.37
PDLIM1P1-201ENST00000604187 ABTB2Q8N961 1025 aa17.34■□□□□ 0.37
PDLIM1P1-201ENST00000604187 DCAF11Q8TEB1 546 aa17.34■□□□□ 0.37
PDLIM1P1-201ENST00000604187 CDK19Q9BWU1 502 aa17.34■□□□□ 0.37
PDLIM1P1-201ENST00000604187 C11orf95C9JLR9 678 aaPredicted RBP17.33■□□□□ 0.36
PDLIM1P1-201ENST00000604187 COL5A2P05997 1499 aaPredicted RBP17.31■□□□□ 0.36
PDLIM1P1-201ENST00000604187 ZBTB7AO95365 584 aa17.31■□□□□ 0.36
PDLIM1P1-201ENST00000604187 ZNF784Q8NCA9 323 aaPredicted RBP17.31■□□□□ 0.36
PDLIM1P1-201ENST00000604187 PDGFDQ9GZP0 370 aaPredicted RBP17.31■□□□□ 0.36
PDLIM1P1-201ENST00000604187 CCDC61Q9Y6R9 512 aa17.31■□□□□ 0.36
PDLIM1P1-201ENST00000604187 PLSCR1O15162 318 aa17.3■□□□□ 0.36
PDLIM1P1-201ENST00000604187 GCP02774 474 aa17.3■□□□□ 0.36
PDLIM1P1-201ENST00000604187 PTF1AQ7RTS3 328 aa17.3■□□□□ 0.36
PDLIM1P1-201ENST00000604187 BCL11BQ9C0K0 894 aaPredicted RBP17.3■□□□□ 0.36
PDLIM1P1-201ENST00000604187 CRB1P82279 1406 aa17.3■□□□□ 0.36
PDLIM1P1-201ENST00000604187 LMO7Q8WWI1 1683 aa17.29■□□□□ 0.36
PDLIM1P1-201ENST00000604187 UTRNP46939 3433 aa17.29■□□□□ 0.36
PDLIM1P1-201ENST00000604187 PLEKHG3A1L390 1219 aa17.29■□□□□ 0.36
PDLIM1P1-201ENST00000604187 ZBTB7CA1YPR0 619 aa17.29■□□□□ 0.36
PDLIM1P1-201ENST00000604187 NLRP13Q86W25 1043 aa17.28■□□□□ 0.36
PDLIM1P1-201ENST00000604187 PTGER2P43116 358 aa17.27■□□□□ 0.36
PDLIM1P1-201ENST00000604187 DDB1Q16531 1140 aa17.27■□□□□ 0.36
PDLIM1P1-201ENST00000604187 ITSN1Q15811 1721 aa17.27■□□□□ 0.35
PDLIM1P1-201ENST00000604187 SENP3-EIF4A1A0A087X0R7 540 aa17.25■□□□□ 0.35
PDLIM1P1-201ENST00000604187 PROM2Q8N271 834 aa17.25■□□□□ 0.35
PDLIM1P1-201ENST00000604187 STAC3Q96MF2 364 aa17.25■□□□□ 0.35
PDLIM1P1-201ENST00000604187 ATF5Q9Y2D1 282 aaPredicted RBP17.25■□□□□ 0.35
PDLIM1P1-201ENST00000604187 PARP4Q9UKK3 1724 aaKnown RBP17.24■□□□□ 0.35
PDLIM1P1-201ENST00000604187 TOM1L2Q6ZVM7 507 aa17.24■□□□□ 0.35
PDLIM1P1-201ENST00000604187 RAB3GAP2Q9H2M9 1393 aa17.24■□□□□ 0.35
PDLIM1P1-201ENST00000604187 PEAK1Q9H792 1746 aa17.24■□□□□ 0.35
PDLIM1P1-201ENST00000604187 TOPAZ1Q8N9V7 1692 aa17.23■□□□□ 0.35
PDLIM1P1-201ENST00000604187 MARCH10Q8NA82 808 aaPredicted RBP17.23■□□□□ 0.35
PDLIM1P1-201ENST00000604187 FHDC1Q9C0D6 1143 aaPredicted RBP17.23■□□□□ 0.35
PDLIM1P1-201ENST00000604187 STK32BQ9NY57 414 aa17.23■□□□□ 0.35
PDLIM1P1-201ENST00000604187 ARHGEF28Q8N1W1 1705 aaKnown RBP17.23■□□□□ 0.35
PDLIM1P1-201ENST00000604187 AATKQ6ZMQ8 1374 aa17.23■□□□□ 0.35
PDLIM1P1-201ENST00000604187 PPIP5K1Q6PFW1 1433 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms