RNA–Protein interactions for RNA: ENST00000603648.1

FOCAD-208, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-208ENST00000603648 BEGAINQ9BUH8 593 aa9.27□□□□□ -0.93
FOCAD-208ENST00000603648 PLEKHG3A1L390 1219 aa9.26□□□□□ -0.93
FOCAD-208ENST00000603648 IRS1P35568 1242 aa9.26□□□□□ -0.93
FOCAD-208ENST00000603648 CCDC24Q8N4L8 307 aa9.26□□□□□ -0.93
FOCAD-208ENST00000603648 GCGRP47871 477 aa9.25□□□□□ -0.93
FOCAD-208ENST00000603648 FOXK2Q01167 660 aa9.25□□□□□ -0.93
FOCAD-208ENST00000603648 KRTAP9-2Q9BYQ4 174 aa9.25□□□□□ -0.93
FOCAD-208ENST00000603648 MMP16P51512 607 aa9.24□□□□□ -0.93
FOCAD-208ENST00000603648 IL27Q8NEV9 243 aa9.23□□□□□ -0.93
FOCAD-208ENST00000603648 KRTAP9-6A0A140TA67 174 aa9.22□□□□□ -0.93
FOCAD-208ENST00000603648 SCARF1Q14162 830 aa9.22□□□□□ -0.93
FOCAD-208ENST00000603648 PURBQ96QR8 312 aaKnown RBP9.22□□□□□ -0.93
FOCAD-208ENST00000603648 ADAM23O75077 832 aa9.21□□□□□ -0.94
FOCAD-208ENST00000603648 DIXDC1Q155Q3 683 aa9.21□□□□□ -0.94
FOCAD-208ENST00000603648 EHBP1Q8NDI1 1231 aa9.21□□□□□ -0.94
FOCAD-208ENST00000603648 SIAH2O43255 324 aa9.2□□□□□ -0.94
FOCAD-208ENST00000603648 KDM4AO75164 1064 aa9.2□□□□□ -0.94
FOCAD-208ENST00000603648 USP46P62068 366 aa9.2□□□□□ -0.94
FOCAD-208ENST00000603648 TMEM132AQ24JP5 1023 aa9.2□□□□□ -0.94
FOCAD-208ENST00000603648 MRPL14Q6P1L8 145 aaKnown RBP9.2□□□□□ -0.94
FOCAD-208ENST00000603648 SPIRE2Q8WWL2 714 aa9.2□□□□□ -0.94
FOCAD-208ENST00000603648 TBC1D2Q9BYX2 928 aa9.2□□□□□ -0.94
FOCAD-208ENST00000603648 NUTM1Q86Y26 1132 aa9.19□□□□□ -0.94
FOCAD-208ENST00000603648 CNTNAP3BQ96NU0 1288 aa9.19□□□□□ -0.94
FOCAD-208ENST00000603648 CNTNAP3Q9BZ76 1288 aa9.19□□□□□ -0.94
FOCAD-208ENST00000603648 PPFIA3O75145 1194 aa9.18□□□□□ -0.94
FOCAD-208ENST00000603648 SH3D19Q5HYK7 790 aa9.18□□□□□ -0.94
FOCAD-208ENST00000603648 RSPH6AQ9H0K4 717 aa9.18□□□□□ -0.94
FOCAD-208ENST00000603648 GOPCQ9HD26 462 aa9.18□□□□□ -0.94
FOCAD-208ENST00000603648 DXOO77932 396 aaKnown RBP9.17□□□□□ -0.94
FOCAD-208ENST00000603648 MYSM1Q5VVJ2 828 aa9.17□□□□□ -0.94
FOCAD-208ENST00000603648 SVOPQ8N4V2 548 aa9.17□□□□□ -0.94
FOCAD-208ENST00000603648 HOXA2O43364 376 aa9.16□□□□□ -0.94
FOCAD-208ENST00000603648 KRT76Q01546 638 aa9.16□□□□□ -0.94
FOCAD-208ENST00000603648 Q3C1V9 767 aa9.16□□□□□ -0.94
FOCAD-208ENST00000603648 KANK3Q6NY19 840 aa9.16□□□□□ -0.94
FOCAD-208ENST00000603648 KRTAP1-3Q8IUG1 177 aa9.16□□□□□ -0.94
FOCAD-208ENST00000603648 MAN1A2O60476 641 aa9.15□□□□□ -0.94
FOCAD-208ENST00000603648 GJA5P36382 358 aa9.15□□□□□ -0.94
FOCAD-208ENST00000603648 GRIPAP1Q4V328 841 aa9.15□□□□□ -0.94
FOCAD-208ENST00000603648 MOXD2PA6NHM9 499 aa9.14□□□□□ -0.95
FOCAD-208ENST00000603648 SKIV2LQ15477 1246 aaKnown RBP9.14□□□□□ -0.95
FOCAD-208ENST00000603648 ZNF385CQ66K41 422 aaPredicted RBP9.14□□□□□ -0.95
FOCAD-208ENST00000603648 SPTLC1O15269 473 aa9.13□□□□□ -0.95
FOCAD-208ENST00000603648 MARSP56192 900 aaKnown RBP9.13□□□□□ -0.95
FOCAD-208ENST00000603648 RSBN1LQ6PCB5 846 aaPredicted RBP9.13□□□□□ -0.95
FOCAD-208ENST00000603648 USB1Q9BQ65 265 aaKnown RBP9.13□□□□□ -0.95
FOCAD-208ENST00000603648 MSTNO14793 375 aa9.12□□□□□ -0.95
FOCAD-208ENST00000603648 NDUFV2P19404 249 aa9.12□□□□□ -0.95
FOCAD-208ENST00000603648 CLK2P49760 499 aaKnown RBP9.12□□□□□ -0.95
FOCAD-208ENST00000603648 TUSC1Q2TAM9 212 aa9.12□□□□□ -0.95
FOCAD-208ENST00000603648 RIC3Q7Z5B4 369 aa9.12□□□□□ -0.95
FOCAD-208ENST00000603648 HLA-CQ95604 372 aa9.11□□□□□ -0.95
FOCAD-208ENST00000603648 LIMD1Q9UGP4 676 aa9.11□□□□□ -0.95
FOCAD-208ENST00000603648 FDX1P10109 184 aa9.1□□□□□ -0.95
FOCAD-208ENST00000603648 GPR161Q8N6U8 529 aaKnown RBP9.1□□□□□ -0.95
FOCAD-208ENST00000603648 POLR3EQ9NVU0 708 aa9.1□□□□□ -0.95
FOCAD-208ENST00000603648 GUCA2AQ02747 115 aa9.09□□□□□ -0.95
FOCAD-208ENST00000603648 PCMTD1Q96MG8 357 aaPredicted RBP9.09□□□□□ -0.95
FOCAD-208ENST00000603648 NNTQ13423 1086 aa9.08□□□□□ -0.96
FOCAD-208ENST00000603648 Q8N3U1 123 aa9.08□□□□□ -0.96
FOCAD-208ENST00000603648 SCARF2Q96GP6 870 aaPredicted RBP9.08□□□□□ -0.96
FOCAD-208ENST00000603648 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.08□□□□□ -0.96
FOCAD-208ENST00000603648 PCDHGC3Q9UN70 934 aa9.08□□□□□ -0.96
FOCAD-208ENST00000603648 PROCA1Q8NCQ7 364 aaPredicted RBP9.07□□□□□ -0.96
FOCAD-208ENST00000603648 COL25A1Q9BXS0 654 aaPredicted RBP9.07□□□□□ -0.96
FOCAD-208ENST00000603648 TLL2Q9Y6L7 1015 aa9.07□□□□□ -0.96
FOCAD-208ENST00000603648 WDR4P57081 412 aaKnown RBP9.06□□□□□ -0.96
FOCAD-208ENST00000603648 C6orf118Q5T5N4 469 aa9.06□□□□□ -0.96
FOCAD-208ENST00000603648 PRPF38BQ5VTL8 546 aaKnown RBP9.06□□□□□ -0.96
FOCAD-208ENST00000603648 WHAMMQ8TF30 809 aa9.06□□□□□ -0.96
FOCAD-208ENST00000603648 PCDHB15Q9Y5E8 787 aa9.06□□□□□ -0.96
FOCAD-208ENST00000603648 TIMP2P16035 220 aa9.05□□□□□ -0.96
FOCAD-208ENST00000603648 SPOCK3Q9BQ16 436 aa9.05□□□□□ -0.96
FOCAD-208ENST00000603648 LILRB3O75022 631 aa9.04□□□□□ -0.96
FOCAD-208ENST00000603648 ARHGEF15O94989 841 aa9.04□□□□□ -0.96
FOCAD-208ENST00000603648 ADH1CP00326 375 aa9.04□□□□□ -0.96
FOCAD-208ENST00000603648 PLA2G4EQ3MJ16 856 aa9.04□□□□□ -0.96
FOCAD-208ENST00000603648 QPCTQ16769 361 aa9.03□□□□□ -0.96
FOCAD-208ENST00000603648 ZBTB3Q9H5J0 574 aa9.03□□□□□ -0.96
FOCAD-208ENST00000603648 HRCP23327 699 aa9.02□□□□□ -0.97
FOCAD-208ENST00000603648 SH3BP2P78314 561 aa9.02□□□□□ -0.97
FOCAD-208ENST00000603648 MTMR2Q13614 643 aa9.02□□□□□ -0.97
FOCAD-208ENST00000603648 CSPP1Q1MSJ5 1256 aa9.02□□□□□ -0.97
FOCAD-208ENST00000603648 PPP2R2DQ66LE6 453 aa9.02□□□□□ -0.97
FOCAD-208ENST00000603648 PTCRAQ6ISU1 281 aaPredicted RBP9.02□□□□□ -0.97
FOCAD-208ENST00000603648 GALNT6Q8NCL4 622 aa9.02□□□□□ -0.97
FOCAD-208ENST00000603648 SPDYE5A6NIY4 337 aa9.01□□□□□ -0.97
FOCAD-208ENST00000603648 FBXO31Q5XUX0 539 aaPredicted RBP9.01□□□□□ -0.97
FOCAD-208ENST00000603648 CABLES1Q8TDN4 633 aa9.01□□□□□ -0.97
FOCAD-208ENST00000603648 C6orf229H3BNL8 230 aa9□□□□□ -0.97
FOCAD-208ENST00000603648 K7ELQ4 463 aaPredicted RBP9□□□□□ -0.97
FOCAD-208ENST00000603648 RNFT1Q5M7Z0 435 aa9□□□□□ -0.97
FOCAD-208ENST00000603648 RETREG3Q86VR2 466 aa9□□□□□ -0.97
FOCAD-208ENST00000603648 SYMPKQ92797 1274 aaKnown RBP9□□□□□ -0.97
FOCAD-208ENST00000603648 ATP1B4Q9UN42 357 aaPredicted RBP9□□□□□ -0.97
FOCAD-208ENST00000603648 RTL5Q5HYW3 569 aaPredicted RBP8.99□□□□□ -0.97
FOCAD-208ENST00000603648 NUTM2BA6NNL0 878 aaPredicted RBP8.98□□□□□ -0.97
FOCAD-208ENST00000603648 NUTM2EB1AL46 878 aaPredicted RBP8.98□□□□□ -0.97
FOCAD-208ENST00000603648 JUNDP17535 347 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms