RNA–Protein interactions for RNA: ENST00000602800.1

PPFIA3-210, Transcript of PTPRF interacting protein alpha 3, human

TSL 4

Gene PPFIA3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA3-210	ENST00000602800	PAK3	O75914	559 aa	Predicted RBP	28.13	■■■□□ 2.09
PPFIA3-210	ENST00000602800	TULP4	Q9NRJ4	1543 aa		28.12	■■■□□ 2.09
PPFIA3-210	ENST00000602800	PRDM11	Q9NQV5	511 aa		28.09	■■■□□ 2.09
PPFIA3-210	ENST00000602800	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.08	■■■□□ 2.09
PPFIA3-210	ENST00000602800	SPATA31A5	Q5VU36	1347 aa		28.08	■■■□□ 2.09
PPFIA3-210	ENST00000602800	SPATA31A7	Q8IWB4	1347 aa		28.08	■■■□□ 2.09
PPFIA3-210	ENST00000602800	COL14A1	Q05707	1796 aa	Known RBP	28.06	■■■□□ 2.08
PPFIA3-210	ENST00000602800	ALS2	Q96Q42	1657 aa		28.04	■■■□□ 2.08
PPFIA3-210	ENST00000602800	NRAP	Q86VF7	1730 aa		28.04	■■■□□ 2.08
PPFIA3-210	ENST00000602800	NUDT16	Q96DE0	195 aa	Known RBP	28.03	■■■□□ 2.08
PPFIA3-210	ENST00000602800	PSD	A5PKW4	1024 aa	Predicted RBP	28.02	■■■□□ 2.08
PPFIA3-210	ENST00000602800	FAM182B	Q5T319	152 aa		28.02	■■■□□ 2.08
PPFIA3-210	ENST00000602800	EN1	Q05925	392 aa	Predicted RBP	28.01	■■■□□ 2.07
PPFIA3-210	ENST00000602800	KIAA0232	Q92628	1395 aa		27.99	■■■□□ 2.07
PPFIA3-210	ENST00000602800	ATP7B	P35670	1465 aa		27.97	■■■□□ 2.07
PPFIA3-210	ENST00000602800	HRC	P23327	699 aa		27.97	■■■□□ 2.07
PPFIA3-210	ENST00000602800	CHRNA2	Q15822	529 aa		27.97	■■■□□ 2.07
PPFIA3-210	ENST00000602800	CDK19	Q9BWU1	502 aa		27.97	■■■□□ 2.07
PPFIA3-210	ENST00000602800	STRN4	Q9NRL3	753 aa		27.97	■■■□□ 2.07
PPFIA3-210	ENST00000602800	SPATA31A1	Q5TZJ5	1347 aa		27.96	■■■□□ 2.07
PPFIA3-210	ENST00000602800	ZC3H6	P61129	1189 aa	Known RBP	27.95	■■■□□ 2.06
PPFIA3-210	ENST00000602800	NUTM2G	Q5VZR2	741 aa		27.94	■■■□□ 2.06
PPFIA3-210	ENST00000602800	LRP5	O75197	1615 aa		27.93	■■■□□ 2.06
PPFIA3-210	ENST00000602800	CCDC61	Q9Y6R9	512 aa		27.93	■■■□□ 2.06
PPFIA3-210	ENST00000602800	FAM196A	Q6ZSG2	479 aa		27.92	■■■□□ 2.06
PPFIA3-210	ENST00000602800	ACE	P12821	1306 aa		27.92	■■■□□ 2.06
PPFIA3-210	ENST00000602800	EVA1C	P58658	441 aa		27.91	■■■□□ 2.06
PPFIA3-210	ENST00000602800	NBPF8	Q3BBV2	869 aa		27.91	■■■□□ 2.06
PPFIA3-210	ENST00000602800	DISP2	A7MBM2	1401 aa		27.91	■■■□□ 2.06
PPFIA3-210	ENST00000602800	THSD7A	Q9UPZ6	1657 aa		27.91	■■■□□ 2.06
PPFIA3-210	ENST00000602800	CRYBG1	Q9Y4K1	1723 aa		27.9	■■■□□ 2.06
PPFIA3-210	ENST00000602800	POLR3A	O14802	1390 aa	Predicted RBP	27.9	■■■□□ 2.06
PPFIA3-210	ENST00000602800	R3HDM1	Q15032	1099 aa	Known RBP	27.9	■■■□□ 2.06
PPFIA3-210	ENST00000602800	USP35	Q9P2H5	1018 aa		27.89	■■■□□ 2.06
PPFIA3-210	ENST00000602800	RGPD1	P0DJD0	1748 aa		27.89	■■■□□ 2.05
PPFIA3-210	ENST00000602800	ITSN1	Q15811	1721 aa		27.89	■■■□□ 2.05
PPFIA3-210	ENST00000602800	ARHGEF28	Q8N1W1	1705 aa	Known RBP	27.89	■■■□□ 2.05
PPFIA3-210	ENST00000602800	PLEKHG3	A1L390	1219 aa		27.88	■■■□□ 2.05
PPFIA3-210	ENST00000602800	TRIM37	O94972	964 aa		27.88	■■■□□ 2.05
PPFIA3-210	ENST00000602800	EZH2	Q15910	746 aa	Known RBP	27.87	■■■□□ 2.05
PPFIA3-210	ENST00000602800	ABTB2	Q8N961	1025 aa		27.87	■■■□□ 2.05
PPFIA3-210	ENST00000602800	PDE3B	Q13370	1112 aa		27.85	■■■□□ 2.05
PPFIA3-210	ENST00000602800	BARGIN	Q6ZT62	677 aa		27.85	■■■□□ 2.05
PPFIA3-210	ENST00000602800	APBA3	O96018	575 aa		27.84	■■■□□ 2.05
PPFIA3-210	ENST00000602800	CAMKK2	Q96RR4	588 aa		27.84	■■■□□ 2.05
PPFIA3-210	ENST00000602800	SSH2	Q76I76	1423 aa		27.83	■■■□□ 2.05
PPFIA3-210	ENST00000602800	PHRF1	Q9P1Y6	1649 aa	Known RBP	27.81	■■■□□ 2.04
PPFIA3-210	ENST00000602800	SRPK2	P78362	688 aa	Known RBP	27.81	■■■□□ 2.04
PPFIA3-210	ENST00000602800	TCP11L2	Q8N4U5	519 aa		27.81	■■■□□ 2.04
PPFIA3-210	ENST00000602800	LARP1	Q6PKG0	1096 aa	Known RBP	27.8	■■■□□ 2.04
PPFIA3-210	ENST00000602800	NLRP13	Q86W25	1043 aa		27.8	■■■□□ 2.04
PPFIA3-210	ENST00000602800	CPD	O75976	1380 aa		27.8	■■■□□ 2.04
PPFIA3-210	ENST00000602800	PARD3	Q8TEW0	1356 aa		27.8	■■■□□ 2.04
PPFIA3-210	ENST00000602800	NBPF1	Q3BBV0	1214 aa		27.79	■■■□□ 2.04
PPFIA3-210	ENST00000602800	USP19	O94966	1318 aa		27.78	■■■□□ 2.04
PPFIA3-210	ENST00000602800	TNS1	Q9HBL0	1735 aa	Known RBP	27.77	■■■□□ 2.04
PPFIA3-210	ENST00000602800	GC	P02774	474 aa		27.76	■■■□□ 2.03
PPFIA3-210	ENST00000602800	THRAP3	Q9Y2W1	955 aa	Known RBP	27.76	■■■□□ 2.03
PPFIA3-210	ENST00000602800	TOPAZ1	Q8N9V7	1692 aa		27.75	■■■□□ 2.03
PPFIA3-210	ENST00000602800	CAMTA1	Q9Y6Y1	1673 aa		27.75	■■■□□ 2.03
PPFIA3-210	ENST00000602800	CENPJ	Q9HC77	1338 aa	Predicted RBP	27.75	■■■□□ 2.03
PPFIA3-210	ENST00000602800	PPIP5K1	Q6PFW1	1433 aa		27.75	■■■□□ 2.03
PPFIA3-210	ENST00000602800	NRK	Q7Z2Y5	1582 aa		27.74	■■■□□ 2.03
PPFIA3-210	ENST00000602800	CABP2	Q9NPB3	220 aa		27.74	■■■□□ 2.03
PPFIA3-210	ENST00000602800	NBPF14	Q5TI25	921 aa		27.72	■■■□□ 2.03
PPFIA3-210	ENST00000602800	KIAA1210	Q9ULL0	1709 aa		27.72	■■■□□ 2.03
PPFIA3-210	ENST00000602800	BRD4	O60885	1362 aa	Predicted RBP	27.72	■■■□□ 2.03
PPFIA3-210	ENST00000602800	ZBTB7C	A1YPR0	619 aa		27.69	■■■□□ 2.02
PPFIA3-210	ENST00000602800	C11orf95	C9JLR9	678 aa	Predicted RBP	27.69	■■■□□ 2.02
PPFIA3-210	ENST00000602800	NLRP6	P59044	892 aa		27.68	■■■□□ 2.02
PPFIA3-210	ENST00000602800	CABP1	Q9NZU7	370 aa		27.68	■■■□□ 2.02
PPFIA3-210	ENST00000602800	LMO7	Q8WWI1	1683 aa		27.67	■■■□□ 2.02
PPFIA3-210	ENST00000602800	COL5A2	P05997	1499 aa	Predicted RBP	27.66	■■■□□ 2.02
PPFIA3-210	ENST00000602800	TRIM26	Q12899	539 aa	Predicted RBP	27.65	■■■□□ 2.02
PPFIA3-210	ENST00000602800	CRB1	P82279	1406 aa		27.65	■■■□□ 2.02
PPFIA3-210	ENST00000602800	USP6	P35125	1406 aa		27.63	■■■□□ 2.01
PPFIA3-210	ENST00000602800	AATK	Q6ZMQ8	1374 aa		27.62	■■■□□ 2.01
PPFIA3-210	ENST00000602800	TOM1L2	Q6ZVM7	507 aa		27.6	■■■□□ 2.01
PPFIA3-210	ENST00000602800	OVOS2	A0A0G2JMS6	1433 aa		27.59	■■■□□ 2.01
PPFIA3-210	ENST00000602800	OVOS2	A0A0J9YW53	1432 aa		27.59	■■■□□ 2.01
PPFIA3-210	ENST00000602800	OVOS2	Q6IE36	1432 aa		27.59	■■■□□ 2.01
PPFIA3-210	ENST00000602800	DDB1	Q16531	1140 aa		27.59	■■■□□ 2.01
PPFIA3-210	ENST00000602800	EVC2	Q86UK5	1308 aa		27.59	■■■□□ 2.01
PPFIA3-210	ENST00000602800	RREB1	Q92766	1687 aa		27.56	■■■□□ 2
PPFIA3-210	ENST00000602800	SPON1	Q9HCB6	807 aa		27.56	■■■□□ 2
PPFIA3-210	ENST00000602800	PPP1R1B	Q9UD71	204 aa	Predicted RBP	27.56	■■■□□ 2
PPFIA3-210	ENST00000602800	L3MBTL2	Q969R5	705 aa		27.55	■■■□□ 2
PPFIA3-210	ENST00000602800	SLIT3	O75094	1523 aa		27.55	■■■□□ 2
PPFIA3-210	ENST00000602800	PARP4	Q9UKK3	1724 aa	Known RBP	27.55	■■■□□ 2
PPFIA3-210	ENST00000602800	ZNF692	Q9BU19	519 aa	Predicted RBP	27.54	■■■□□ 2
PPFIA3-210	ENST00000602800	NUP188	Q5SRE5	1749 aa		27.53	■■■□□ 2
PPFIA3-210	ENST00000602800	QRICH2	Q9H0J4	1663 aa		27.53	■■■□□ 2
PPFIA3-210	ENST00000602800	WDR17	Q8IZU2	1322 aa		27.53	■■■□□ 2
PPFIA3-210	ENST00000602800	PLSCR1	O15162	318 aa		27.53	■■■□□ 2
PPFIA3-210	ENST00000602800	CDCA7	Q9BWT1	371 aa	Predicted RBP	27.53	■■■□□ 2
PPFIA3-210	ENST00000602800	KCNQ2	O43526	872 aa		27.52	■■■□□ 2
PPFIA3-210	ENST00000602800	KCNH5	Q8NCM2	988 aa		27.52	■■■□□ 2
PPFIA3-210	ENST00000602800	AXIN2	Q9Y2T1	843 aa		27.52	■■■□□ 2
PPFIA3-210	ENST00000602800	BCL11B	Q9C0K0	894 aa	Predicted RBP	27.51	■■□□□ 1.99
PPFIA3-210	ENST00000602800	ARHGEF25	Q86VW2	580 aa		27.5	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms