RNA–Protein interactions for RNA: ENST00000602591.1

HCG18-246, Transcript of HLA complex group 18, humanhuman

Gene HCG18, Length 1,976 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-246ENST00000602591 DDX17Q92841 729 aaKnown RBP16.12■□□□□ 0.17
HCG18-246ENST00000602591 CGNL1Q0VF96 1302 aa16.11■□□□□ 0.17
HCG18-246ENST00000602591 ATF3P18847 181 aa16.11■□□□□ 0.17
HCG18-246ENST00000602591 NGDNQ8NEJ9 315 aaKnown RBP16.11■□□□□ 0.17
HCG18-246ENST00000602591 FBLN1P23142 703 aa16.11■□□□□ 0.17
HCG18-246ENST00000602591 TNNT2P45379 298 aaPredicted RBP16.11■□□□□ 0.17
HCG18-246ENST00000602591 XPCQ01831 940 aaPredicted RBP16.11■□□□□ 0.17
HCG18-246ENST00000602591 ANKRD26Q9UPS8 1709 aa16.1■□□□□ 0.17
HCG18-246ENST00000602591 TTC21BQ7Z4L5 1316 aa16.1■□□□□ 0.17
HCG18-246ENST00000602591 FOXO3O43524 673 aa16.09■□□□□ 0.17
HCG18-246ENST00000602591 RALBP1Q15311 655 aa16.09■□□□□ 0.17
HCG18-246ENST00000602591 MYBBP1AQ9BQG0 1328 aaKnown RBP16.09■□□□□ 0.17
HCG18-246ENST00000602591 CCER2I3L3R5 266 aa16.09■□□□□ 0.17
HCG18-246ENST00000602591 PPP2R1AP30153 589 aa16.09■□□□□ 0.17
HCG18-246ENST00000602591 PIK3C2AO00443 1686 aa16.08■□□□□ 0.17
HCG18-246ENST00000602591 CADPS2Q86UW7 1296 aa16.08■□□□□ 0.16
HCG18-246ENST00000602591 MARF1Q9Y4F3 1742 aaKnown RBP16.08■□□□□ 0.16
HCG18-246ENST00000602591 ZNF692Q9BU19 519 aaPredicted RBP16.07■□□□□ 0.16
HCG18-246ENST00000602591 MORC1Q86VD1 984 aa16.07■□□□□ 0.16
HCG18-246ENST00000602591 MRS2Q9HD23 443 aa16.06■□□□□ 0.16
HCG18-246ENST00000602591 TRPM3Q9HCF6 1732 aaPredicted RBP16.05■□□□□ 0.16
HCG18-246ENST00000602591 KIF1AQ12756 1690 aa16.05■□□□□ 0.16
HCG18-246ENST00000602591 NUTM2GQ5VZR2 741 aa16.05■□□□□ 0.16
HCG18-246ENST00000602591 BRINP3Q76B58 766 aa16.05■□□□□ 0.16
HCG18-246ENST00000602591 SLAIN2Q9P270 581 aa16.05■□□□□ 0.16
HCG18-246ENST00000602591 NSD2O96028 1365 aa16.04■□□□□ 0.16
HCG18-246ENST00000602591 BCL11AQ9H165 835 aa16.03■□□□□ 0.16
HCG18-246ENST00000602591 OVOS2A0A0J9YW53 1432 aa16.03■□□□□ 0.16
HCG18-246ENST00000602591 OVOS2Q6IE36 1432 aa16.03■□□□□ 0.16
HCG18-246ENST00000602591 PSME1Q06323 249 aa16.02■□□□□ 0.16
HCG18-246ENST00000602591 NLRP13Q86W25 1043 aa16.02■□□□□ 0.16
HCG18-246ENST00000602591 YTHDC1Q96MU7 727 aaKnown RBP16.02■□□□□ 0.16
HCG18-246ENST00000602591 PAK3O75914 559 aaPredicted RBP16.02■□□□□ 0.15
HCG18-246ENST00000602591 BRD4O60885 1362 aaPredicted RBP16.01■□□□□ 0.15
HCG18-246ENST00000602591 PXDNQ92626 1479 aa16■□□□□ 0.15
HCG18-246ENST00000602591 MAP2P11137 1827 aaKnown RBP16■□□□□ 0.15
HCG18-246ENST00000602591 KRT28Q7Z3Y7 464 aa16■□□□□ 0.15
HCG18-246ENST00000602591 PNISRQ8TF01 805 aaKnown RBP15.99■□□□□ 0.15
HCG18-246ENST00000602591 TTC21AQ8NDW8 1320 aa15.99■□□□□ 0.15
HCG18-246ENST00000602591 SOX12O15370 315 aa15.98■□□□□ 0.15
HCG18-246ENST00000602591 MTHFSP49914 203 aa15.98■□□□□ 0.15
HCG18-246ENST00000602591 ALS2Q96Q42 1657 aa15.98■□□□□ 0.15
HCG18-246ENST00000602591 PLEKHG5O94827 1062 aa15.98■□□□□ 0.15
HCG18-246ENST00000602591 FAM9BQ8IZU0 186 aa15.98■□□□□ 0.15
HCG18-246ENST00000602591 ABTB2Q8N961 1025 aa15.98■□□□□ 0.15
HCG18-246ENST00000602591 COG3Q96JB2 828 aa15.98■□□□□ 0.15
HCG18-246ENST00000602591 USP54Q70EL1 1684 aa15.98■□□□□ 0.15
HCG18-246ENST00000602591 RRS1Q15050 365 aaKnown RBP15.97■□□□□ 0.15
HCG18-246ENST00000602591 EMILIN1Q9Y6C2 1016 aa15.97■□□□□ 0.15
HCG18-246ENST00000602591 USP31Q70CQ4 1352 aa15.97■□□□□ 0.15
HCG18-246ENST00000602591 ROBO1Q9Y6N7 1651 aa15.97■□□□□ 0.15
HCG18-246ENST00000602591 SENP3-EIF4A1A0A087X0R7 540 aa15.96■□□□□ 0.15
HCG18-246ENST00000602591 NLRP6P59044 892 aa15.96■□□□□ 0.15
HCG18-246ENST00000602591 POLKQ9UBT6 870 aa15.96■□□□□ 0.15
HCG18-246ENST00000602591 PEAK1Q9H792 1746 aa15.96■□□□□ 0.15
HCG18-246ENST00000602591 SHPRHQ149N8 1683 aa15.96■□□□□ 0.15
HCG18-246ENST00000602591 SCAF1Q9H7N4 1312 aaKnown RBP15.96■□□□□ 0.15
HCG18-246ENST00000602591 NHSL1Q5SYE7 1610 aa15.96■□□□□ 0.14
HCG18-246ENST00000602591 COL3A1P02461 1466 aaPredicted RBP15.95■□□□□ 0.14
HCG18-246ENST00000602591 NPHP3Q7Z494 1330 aa15.94■□□□□ 0.14
HCG18-246ENST00000602591 MED1Q15648 1581 aaPredicted RBP15.94■□□□□ 0.14
HCG18-246ENST00000602591 LMOD2Q6P5Q4 547 aa15.93■□□□□ 0.14
HCG18-246ENST00000602591 NFAT5O94916 1531 aa15.92■□□□□ 0.14
HCG18-246ENST00000602591 SOS2Q07890 1332 aaPredicted RBP15.92■□□□□ 0.14
HCG18-246ENST00000602591 PPM1GO15355 546 aaPredicted RBP15.92■□□□□ 0.14
HCG18-246ENST00000602591 AATKQ6ZMQ8 1374 aa15.92■□□□□ 0.14
HCG18-246ENST00000602591 SMG6Q86US8 1419 aaKnown RBP15.91■□□□□ 0.14
HCG18-246ENST00000602591 CABLES1Q8TDN4 633 aa15.91■□□□□ 0.14
HCG18-246ENST00000602591 SPATA31A3Q5VYP0 1347 aa15.91■□□□□ 0.14
HCG18-246ENST00000602591 TNS3Q68CZ2 1445 aa15.91■□□□□ 0.14
HCG18-246ENST00000602591 SBNO1A3KN83 1393 aa15.91■□□□□ 0.14
HCG18-246ENST00000602591 CRYBG1Q9Y4K1 1723 aa15.9■□□□□ 0.14
HCG18-246ENST00000602591 MAP3K19Q56UN5 1328 aa15.9■□□□□ 0.14
HCG18-246ENST00000602591 PNPLA6Q8IY17 1366 aa15.9■□□□□ 0.14
HCG18-246ENST00000602591 SLIT3O75094 1523 aa15.9■□□□□ 0.14
HCG18-246ENST00000602591 PIP4K2BP78356 416 aa15.89■□□□□ 0.13
HCG18-246ENST00000602591 ADAMTS8Q9UP79 889 aa15.89■□□□□ 0.13
HCG18-246ENST00000602591 USP19O94966 1318 aa15.89■□□□□ 0.13
HCG18-246ENST00000602591 LTN1O94822 1766 aa15.89■□□□□ 0.13
HCG18-246ENST00000602591 CERKQ8TCT0 537 aa15.88■□□□□ 0.13
HCG18-246ENST00000602591 UBAP1LF5GYI3 381 aa15.87■□□□□ 0.13
HCG18-246ENST00000602591 PHRF1Q9P1Y6 1649 aaKnown RBP15.87■□□□□ 0.13
HCG18-246ENST00000602591 CDK12Q9NYV4 1490 aaPredicted RBP15.87■□□□□ 0.13
HCG18-246ENST00000602591 AHDC1Q5TGY3 1603 aaPredicted RBP15.87■□□□□ 0.13
HCG18-246ENST00000602591 HSP90AB2PQ58FF8 381 aa15.87■□□□□ 0.13
HCG18-246ENST00000602591 GCP02774 474 aa15.86■□□□□ 0.13
HCG18-246ENST00000602591 INSRP06213 1382 aa15.85■□□□□ 0.13
HCG18-246ENST00000602591 ABCA3Q99758 1704 aa15.85■□□□□ 0.13
HCG18-246ENST00000602591 COL16A1Q07092 1604 aaPredicted RBP15.84■□□□□ 0.13
HCG18-246ENST00000602591 TOM1O60784 492 aa15.84■□□□□ 0.13
HCG18-246ENST00000602591 PHLPP1O60346 1717 aa15.83■□□□□ 0.13
HCG18-246ENST00000602591 CCDC146Q8IYE0 955 aa15.83■□□□□ 0.12
HCG18-246ENST00000602591 BLMP54132 1417 aaPredicted RBP15.83■□□□□ 0.12
HCG18-246ENST00000602591 IQSEC2Q5JU85 1478 aa15.83■□□□□ 0.12
HCG18-246ENST00000602591 ZBTB7CA1YPR0 619 aa15.82■□□□□ 0.12
HCG18-246ENST00000602591 IL13P35225 146 aa15.82■□□□□ 0.12
HCG18-246ENST00000602591 ZC3H6P61129 1189 aaKnown RBP15.82■□□□□ 0.12
HCG18-246ENST00000602591 HNRNPUQ00839 825 aaKnown RBP eCLIP15.82■□□□□ 0.12
HCG18-246ENST00000602591 RGPD5Q99666 1765 aa15.82■□□□□ 0.12
HCG18-246ENST00000602591 EIF4A2Q14240 407 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms