RNA–Protein interactions for RNA: ENST00000602503.1

KDM1A-206, Transcript of lysine demethylase 1A, humanhuman

Gene KDM1A, Length 2,810 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-206ENST00000602503 PMFBP1Q8TBY8 1022 aa9.62□□□□□ -0.87
KDM1A-206ENST00000602503 CALCOCO1Q9P1Z2 691 aa9.62□□□□□ -0.87
KDM1A-206ENST00000602503 ARHGAP5Q13017 1502 aa9.61□□□□□ -0.87
KDM1A-206ENST00000602503 IRX5P78411 483 aaPredicted RBP9.61□□□□□ -0.87
KDM1A-206ENST00000602503 ZNF692Q9BU19 519 aaPredicted RBP9.61□□□□□ -0.87
KDM1A-206ENST00000602503 CARD11Q9BXL7 1154 aa9.61□□□□□ -0.87
KDM1A-206ENST00000602503 OGFRQ9NZT2 677 aa9.61□□□□□ -0.87
KDM1A-206ENST00000602503 PARD3Q8TEW0 1356 aa9.61□□□□□ -0.87
KDM1A-206ENST00000602503 TNPO1Q92973 898 aaKnown RBP9.61□□□□□ -0.87
KDM1A-206ENST00000602503 COL17A1Q9UMD9 1497 aaPredicted RBP9.61□□□□□ -0.87
KDM1A-206ENST00000602503 PDE3AQ14432 1141 aa9.6□□□□□ -0.87
KDM1A-206ENST00000602503 ARID3AQ99856 593 aa9.6□□□□□ -0.87
KDM1A-206ENST00000602503 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.6□□□□□ -0.87
KDM1A-206ENST00000602503 C22orf23Q9BZE7 217 aa9.6□□□□□ -0.87
KDM1A-206ENST00000602503 RTEL1-TNFRSF6BF6WH68 1400 aa9.59□□□□□ -0.87
KDM1A-206ENST00000602503 KCNJ4P48050 445 aa9.59□□□□□ -0.87
KDM1A-206ENST00000602503 EFCC1Q9HA90 598 aa9.59□□□□□ -0.87
KDM1A-206ENST00000602503 GEMIN8Q9NWZ8 242 aaKnown RBP9.59□□□□□ -0.87
KDM1A-206ENST00000602503 ASXL2Q76L83 1435 aa9.59□□□□□ -0.87
KDM1A-206ENST00000602503 DIAPH3Q9NSV4 1193 aa9.59□□□□□ -0.87
KDM1A-206ENST00000602503 ABCC1P33527 1531 aa9.58□□□□□ -0.88
KDM1A-206ENST00000602503 KIAA1210Q9ULL0 1709 aa9.58□□□□□ -0.88
KDM1A-206ENST00000602503 PLCH2O75038 1416 aa9.58□□□□□ -0.88
KDM1A-206ENST00000602503 DEPDC5O75140 1603 aa9.58□□□□□ -0.88
KDM1A-206ENST00000602503 A2MP01023 1474 aa9.58□□□□□ -0.88
KDM1A-206ENST00000602503 WDR7Q9Y4E6 1490 aa9.58□□□□□ -0.88
KDM1A-206ENST00000602503 CACNB1Q02641 598 aaPredicted RBP9.58□□□□□ -0.88
KDM1A-206ENST00000602503 ATP2B3Q16720 1220 aa9.58□□□□□ -0.88
KDM1A-206ENST00000602503 ZNF622Q969S3 477 aaKnown RBP eCLIP9.58□□□□□ -0.88
KDM1A-206ENST00000602503 DDX49Q9Y6V7 483 aaKnown RBP9.58□□□□□ -0.88
KDM1A-206ENST00000602503 PLA2R1Q13018 1463 aa9.57□□□□□ -0.88
KDM1A-206ENST00000602503 DUSP27Q5VZP5 1158 aa9.57□□□□□ -0.88
KDM1A-206ENST00000602503 ZNF710Q8N1W2 664 aa9.57□□□□□ -0.88
KDM1A-206ENST00000602503 CEP152O94986 1710 aa9.57□□□□□ -0.88
KDM1A-206ENST00000602503 TULP2O00295 520 aa9.57□□□□□ -0.88
KDM1A-206ENST00000602503 GOLGA2Q08379 1002 aa9.57□□□□□ -0.88
KDM1A-206ENST00000602503 CHAF1AQ13111 956 aaPredicted RBP9.57□□□□□ -0.88
KDM1A-206ENST00000602503 SYCP1Q15431 976 aa9.57□□□□□ -0.88
KDM1A-206ENST00000602503 RIMBP3CA6NJZ7 1639 aa9.56□□□□□ -0.88
KDM1A-206ENST00000602503 RIMBP3BA6NNM3 1639 aa9.56□□□□□ -0.88
KDM1A-206ENST00000602503 RIMBP3Q9UFD9 1639 aa9.56□□□□□ -0.88
KDM1A-206ENST00000602503 RAPGEF3O95398 923 aa9.56□□□□□ -0.88
KDM1A-206ENST00000602503 NGEFQ8N5V2 710 aa9.56□□□□□ -0.88
KDM1A-206ENST00000602503 CLUAP1Q96AJ1 413 aa9.56□□□□□ -0.88
KDM1A-206ENST00000602503 POLR3GLQ9BT43 218 aa9.56□□□□□ -0.88
KDM1A-206ENST00000602503 IQGAP1P46940 1657 aa9.56□□□□□ -0.88
KDM1A-206ENST00000602503 SPHKAPQ2M3C7 1700 aa9.56□□□□□ -0.88
KDM1A-206ENST00000602503 SPRYD3Q8NCJ5 442 aa9.56□□□□□ -0.88
KDM1A-206ENST00000602503 PANK3Q9H999 370 aa9.56□□□□□ -0.88
KDM1A-206ENST00000602503 FAM69CQ0P6D2 419 aa9.55□□□□□ -0.88
KDM1A-206ENST00000602503 CTR9Q6PD62 1173 aa9.55□□□□□ -0.88
KDM1A-206ENST00000602503 CHMP4AQ9BY43 222 aa9.55□□□□□ -0.88
KDM1A-206ENST00000602503 TRPM2O94759 1503 aa9.55□□□□□ -0.88
KDM1A-206ENST00000602503 ST20-MTHFSA0A0A6YYL1 179 aa9.55□□□□□ -0.88
KDM1A-206ENST00000602503 PIBF1Q8WXW3 757 aa9.55□□□□□ -0.88
KDM1A-206ENST00000602503 ANKRD7Q92527 254 aa9.55□□□□□ -0.88
KDM1A-206ENST00000602503 SPINK5Q9NQ38 1064 aaPredicted RBP9.55□□□□□ -0.88
KDM1A-206ENST00000602503 TET3O43151 1660 aa9.54□□□□□ -0.88
KDM1A-206ENST00000602503 IGHDP01880 384 aa9.54□□□□□ -0.88
KDM1A-206ENST00000602503 MADDQ8WXG6 1647 aa9.54□□□□□ -0.88
KDM1A-206ENST00000602503 SENP3-EIF4A1A0A087X0R7 540 aa9.54□□□□□ -0.88
KDM1A-206ENST00000602503 MFAP1P55081 439 aaKnown RBP9.54□□□□□ -0.88
KDM1A-206ENST00000602503 PTMAP06454 111 aaKnown RBP9.53□□□□□ -0.88
KDM1A-206ENST00000602503 TRAPPC8Q9Y2L5 1435 aa9.53□□□□□ -0.88
KDM1A-206ENST00000602503 SYNMO15061 1565 aa9.53□□□□□ -0.88
KDM1A-206ENST00000602503 VWDEQ8N2E2 1590 aa9.53□□□□□ -0.88
KDM1A-206ENST00000602503 RWDD1Q9H446 243 aaPredicted RBP9.53□□□□□ -0.88
KDM1A-206ENST00000602503 HDAC5Q9UQL6 1122 aa9.53□□□□□ -0.88
KDM1A-206ENST00000602503 ATF5Q9Y2D1 282 aaPredicted RBP9.53□□□□□ -0.88
KDM1A-206ENST00000602503 PTPRTO14522 1441 aa9.53□□□□□ -0.88
KDM1A-206ENST00000602503 NKTRP30414 1462 aaKnown RBP9.52□□□□□ -0.88
KDM1A-206ENST00000602503 APPP05067 770 aa9.52□□□□□ -0.88
KDM1A-206ENST00000602503 ZSCAN23Q3MJ62 389 aa9.52□□□□□ -0.88
KDM1A-206ENST00000602503 BCL2L12Q9HB09 334 aa9.52□□□□□ -0.88
KDM1A-206ENST00000602503 NPC1L1Q9UHC9 1359 aa9.52□□□□□ -0.89
KDM1A-206ENST00000602503 ZNF521Q96K83 1311 aa9.52□□□□□ -0.89
KDM1A-206ENST00000602503 NUCB2P80303 420 aa9.52□□□□□ -0.89
KDM1A-206ENST00000602503 HOMEZQ8IX15 550 aa9.52□□□□□ -0.89
KDM1A-206ENST00000602503 TRMT2AQ8IZ69 625 aaKnown RBP9.52□□□□□ -0.89
KDM1A-206ENST00000602503 HSP90B1P14625 803 aaKnown RBP9.51□□□□□ -0.89
KDM1A-206ENST00000602503 SLFN5Q08AF3 891 aa9.51□□□□□ -0.89
KDM1A-206ENST00000602503 NOLC1Q14978 699 aaKnown RBP eCLIP9.51□□□□□ -0.895e-8■■■■□ 20
KDM1A-206ENST00000602503 EFCAB2Q5VUJ9 269 aa9.51□□□□□ -0.89
KDM1A-206ENST00000602503 SPTLC3Q9NUV7 552 aa9.51□□□□□ -0.89
KDM1A-206ENST00000602503 INO80Q9ULG1 1556 aaPredicted RBP9.51□□□□□ -0.89
KDM1A-206ENST00000602503 PER1O15534 1290 aaPredicted RBP9.51□□□□□ -0.89
KDM1A-206ENST00000602503 TPM3P06753 285 aa9.51□□□□□ -0.89
KDM1A-206ENST00000602503 SLFN14P0C7P3 912 aa9.51□□□□□ -0.89
KDM1A-206ENST00000602503 TRHP20396 242 aaPredicted RBP9.51□□□□□ -0.89
KDM1A-206ENST00000602503 RBSNQ9H1K0 784 aa9.51□□□□□ -0.89
KDM1A-206ENST00000602503 ZFYVE16Q7Z3T8 1539 aa9.51□□□□□ -0.89
KDM1A-206ENST00000602503 FKBP5Q13451 457 aaPredicted RBP9.5□□□□□ -0.89
KDM1A-206ENST00000602503 CDCA8Q53HL2 280 aa9.5□□□□□ -0.89
KDM1A-206ENST00000602503 LRSAM1Q6UWE0 723 aa9.5□□□□□ -0.89
KDM1A-206ENST00000602503 DHX37Q8IY37 1157 aaKnown RBP9.5□□□□□ -0.89
KDM1A-206ENST00000602503 TSPOAP1O95153 1857 aa9.5□□□□□ -0.89
KDM1A-206ENST00000602503 ABCA9Q8IUA7 1624 aa9.5□□□□□ -0.89
KDM1A-206ENST00000602503 SPDYE4A6NLX3 237 aa9.5□□□□□ -0.89
KDM1A-206ENST00000602503 CTIFO43310 598 aaKnown RBP9.5□□□□□ -0.89
KDM1A-206ENST00000602503 BAG4O95429 457 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms