RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 LMOD2Q6P5Q4 547 aa27.18■■□□□ 1.94
IRF3-231ENST00000602190 GPRASP1Q5JY77 1395 aa27.18■■□□□ 1.94
IRF3-231ENST00000602190 ARHGEF28Q8N1W1 1705 aaKnown RBP27.18■■□□□ 1.94
IRF3-231ENST00000602190 PHRF1Q9P1Y6 1649 aaKnown RBP27.17■■□□□ 1.94
IRF3-231ENST00000602190 POGKQ9P215 609 aa27.17■■□□□ 1.94
IRF3-231ENST00000602190 ATP7BP35670 1465 aa27.16■■□□□ 1.94
IRF3-231ENST00000602190 WASLO00401 505 aaPredicted RBP27.14■■□□□ 1.94
IRF3-231ENST00000602190 TOPAZ1Q8N9V7 1692 aa27.12■■□□□ 1.93
IRF3-231ENST00000602190 PSDA5PKW4 1024 aaPredicted RBP27.11■■□□□ 1.93
IRF3-231ENST00000602190 PLEKHG5O94827 1062 aa27.11■■□□□ 1.93
IRF3-231ENST00000602190 HIRIP3Q9BW71 556 aaPredicted RBP27.11■■□□□ 1.93
IRF3-231ENST00000602190 TRAK1Q9UPV9 953 aa27.11■■□□□ 1.93
IRF3-231ENST00000602190 RREB1Q92766 1687 aa27.09■■□□□ 1.93
IRF3-231ENST00000602190 EN1Q05925 392 aaPredicted RBP27.09■■□□□ 1.93
IRF3-231ENST00000602190 STAC3Q96MF2 364 aa27.09■■□□□ 1.93
IRF3-231ENST00000602190 SPATA31A1Q5TZJ5 1347 aa27.09■■□□□ 1.93
IRF3-231ENST00000602190 MINK1Q8N4C8 1332 aaPredicted RBP27.09■■□□□ 1.93
IRF3-231ENST00000602190 RAB3GAP2Q9H2M9 1393 aa27.08■■□□□ 1.93
IRF3-231ENST00000602190 LMO7Q8WWI1 1683 aa27.05■■□□□ 1.92
IRF3-231ENST00000602190 A0A0G2JS52 829 aa27.05■■□□□ 1.92
IRF3-231ENST00000602190 MYT1Q01538 1121 aa27.05■■□□□ 1.92
IRF3-231ENST00000602190 FAM182BQ5T319 152 aa27.05■■□□□ 1.92
IRF3-231ENST00000602190 POLR3AO14802 1390 aaPredicted RBP27.05■■□□□ 1.92
IRF3-231ENST00000602190 KIAA0232Q92628 1395 aa27.05■■□□□ 1.92
IRF3-231ENST00000602190 PRDM11Q9NQV5 511 aa27.04■■□□□ 1.92
IRF3-231ENST00000602190 PARD3Q8TEW0 1356 aa27.04■■□□□ 1.92
IRF3-231ENST00000602190 NRKQ7Z2Y5 1582 aa27.04■■□□□ 1.92
IRF3-231ENST00000602190 CAMKK2Q96RR4 588 aa27.03■■□□□ 1.92
IRF3-231ENST00000602190 NGDNQ8NEJ9 315 aaKnown RBP27.01■■□□□ 1.91
IRF3-231ENST00000602190 NUP188Q5SRE5 1749 aa27.01■■□□□ 1.91
IRF3-231ENST00000602190 KIAA1210Q9ULL0 1709 aa26.99■■□□□ 1.91
IRF3-231ENST00000602190 R3HDM1Q15032 1099 aaKnown RBP26.99■■□□□ 1.91
IRF3-231ENST00000602190 EZH2Q15910 746 aaKnown RBP26.98■■□□□ 1.91
IRF3-231ENST00000602190 FAM196AQ6ZSG2 479 aa26.98■■□□□ 1.91
IRF3-231ENST00000602190 BARGINQ6ZT62 677 aa26.98■■□□□ 1.91
IRF3-231ENST00000602190 NUDT16Q96DE0 195 aaKnown RBP26.98■■□□□ 1.91
IRF3-231ENST00000602190 CAMTA1Q9Y6Y1 1673 aa26.98■■□□□ 1.91
IRF3-231ENST00000602190 SSH2Q76I76 1423 aa26.98■■□□□ 1.91
IRF3-231ENST00000602190 CPDO75976 1380 aa26.97■■□□□ 1.91
IRF3-231ENST00000602190 DCAF11Q8TEB1 546 aa26.97■■□□□ 1.91
IRF3-231ENST00000602190 PARP4Q9UKK3 1724 aaKnown RBP26.96■■□□□ 1.91
IRF3-231ENST00000602190 PAK3O75914 559 aaPredicted RBP26.95■■□□□ 1.9
IRF3-231ENST00000602190 USP19O94966 1318 aa26.94■■□□□ 1.9
IRF3-231ENST00000602190 CHRNA2Q15822 529 aa26.94■■□□□ 1.9
IRF3-231ENST00000602190 PLEKHG3A1L390 1219 aa26.93■■□□□ 1.9
IRF3-231ENST00000602190 KDM2AQ9Y2K7 1162 aa26.93■■□□□ 1.9
IRF3-231ENST00000602190 TRIM37O94972 964 aa26.92■■□□□ 1.9
IRF3-231ENST00000602190 PEAK1Q9H792 1746 aa26.91■■□□□ 1.9
IRF3-231ENST00000602190 RGPD3A6NKT7 1758 aaPredicted RBP26.91■■□□□ 1.9
IRF3-231ENST00000602190 RGPD4Q7Z3J3 1758 aa26.91■■□□□ 1.9
IRF3-231ENST00000602190 ACEP12821 1306 aa26.9■■□□□ 1.9
IRF3-231ENST00000602190 NBPF8Q3BBV2 869 aa26.89■■□□□ 1.9
IRF3-231ENST00000602190 CCDC61Q9Y6R9 512 aa26.89■■□□□ 1.9
IRF3-231ENST00000602190 ZC3H6P61129 1189 aaKnown RBP26.88■■□□□ 1.89
IRF3-231ENST00000602190 CDK19Q9BWU1 502 aa26.88■■□□□ 1.89
IRF3-231ENST00000602190 STRN4Q9NRL3 753 aa26.87■■□□□ 1.89
IRF3-231ENST00000602190 COL5A2P05997 1499 aaPredicted RBP26.86■■□□□ 1.89
IRF3-231ENST00000602190 APBA3O96018 575 aa26.85■■□□□ 1.89
IRF3-231ENST00000602190 THRAP3Q9Y2W1 955 aaKnown RBP26.85■■□□□ 1.89
IRF3-231ENST00000602190 SBF2Q86WG5 1849 aa26.85■■□□□ 1.89
IRF3-231ENST00000602190 TCP11L2Q8N4U5 519 aa26.84■■□□□ 1.89
IRF3-231ENST00000602190 BRD4O60885 1362 aaPredicted RBP26.84■■□□□ 1.89
IRF3-231ENST00000602190 LARP1Q6PKG0 1096 aaKnown RBP26.83■■□□□ 1.89
IRF3-231ENST00000602190 NUTM2GQ5VZR2 741 aa26.82■■□□□ 1.88
IRF3-231ENST00000602190 SLIT3O75094 1523 aa26.81■■□□□ 1.88
IRF3-231ENST00000602190 LRRC37A3O60309 1634 aa26.81■■□□□ 1.88
IRF3-231ENST00000602190 COL18A1P39060 1754 aa26.81■■□□□ 1.88
IRF3-231ENST00000602190 WNK3Q9BYP7 1800 aa26.8■■□□□ 1.88
IRF3-231ENST00000602190 PDE3BQ13370 1112 aa26.79■■□□□ 1.88
IRF3-231ENST00000602190 ABTB2Q8N961 1025 aa26.78■■□□□ 1.88
IRF3-231ENST00000602190 USP35Q9P2H5 1018 aa26.78■■□□□ 1.88
IRF3-231ENST00000602190 CRB1P82279 1406 aa26.77■■□□□ 1.88
IRF3-231ENST00000602190 C11orf95C9JLR9 678 aaPredicted RBP26.77■■□□□ 1.88
IRF3-231ENST00000602190 GCP02774 474 aa26.77■■□□□ 1.88
IRF3-231ENST00000602190 CASZ1Q86V15 1759 aa26.76■■□□□ 1.88
IRF3-231ENST00000602190 PPIP5K1Q6PFW1 1433 aa26.76■■□□□ 1.87
IRF3-231ENST00000602190 EVA1CP58658 441 aa26.76■■□□□ 1.87
IRF3-231ENST00000602190 NLRP13Q86W25 1043 aa26.75■■□□□ 1.87
IRF3-231ENST00000602190 OVOS2A0A0G2JMS6 1433 aa26.74■■□□□ 1.87
IRF3-231ENST00000602190 OVOS2A0A0J9YW53 1432 aa26.74■■□□□ 1.87
IRF3-231ENST00000602190 OVOS2Q6IE36 1432 aa26.74■■□□□ 1.87
IRF3-231ENST00000602190 AATKQ6ZMQ8 1374 aa26.74■■□□□ 1.87
IRF3-231ENST00000602190 BCL9O00512 1426 aa26.73■■□□□ 1.87
IRF3-231ENST00000602190 USP6P35125 1406 aa26.73■■□□□ 1.87
IRF3-231ENST00000602190 PIK3C2AO00443 1686 aa26.73■■□□□ 1.87
IRF3-231ENST00000602190 QRICH2Q9H0J4 1663 aa26.73■■□□□ 1.87
IRF3-231ENST00000602190 NBPF14Q5TI25 921 aa26.72■■□□□ 1.87
IRF3-231ENST00000602190 NBPF1Q3BBV0 1214 aa26.71■■□□□ 1.87
IRF3-231ENST00000602190 NINLQ9Y2I6 1382 aa26.71■■□□□ 1.87
IRF3-231ENST00000602190 PLSCR1O15162 318 aa26.69■■□□□ 1.86
IRF3-231ENST00000602190 SPON1Q9HCB6 807 aa26.67■■□□□ 1.86
IRF3-231ENST00000602190 CENPJQ9HC77 1338 aaPredicted RBP26.66■■□□□ 1.86
IRF3-231ENST00000602190 KCNQ2O43526 872 aa26.66■■□□□ 1.86
IRF3-231ENST00000602190 AKAP12Q02952 1782 aa26.66■■□□□ 1.86
IRF3-231ENST00000602190 RGPD5Q99666 1765 aa26.62■■□□□ 1.85
IRF3-231ENST00000602190 SRPK2P78362 688 aaKnown RBP26.62■■□□□ 1.85
IRF3-231ENST00000602190 ANO8Q9HCE9 1232 aaPredicted RBP26.62■■□□□ 1.85
IRF3-231ENST00000602190 CABP2Q9NPB3 220 aa26.62■■□□□ 1.85
IRF3-231ENST00000602190 CPSF1Q10570 1443 aaKnown RBP26.62■■□□□ 1.85
IRF3-231ENST00000602190 YY1P25490 414 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms