RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 KRT27Q7Z3Y8 459 aa27.48■■□□□ 1.99
FARP1-229ENST00000600190 DEFB132Q7Z7B7 95 aa27.47■■□□□ 1.99
FARP1-229ENST00000600190 ALS2Q96Q42 1657 aa27.46■■□□□ 1.99
FARP1-229ENST00000600190 FAM98CQ17RN3 349 aaKnown RBP27.44■■□□□ 1.98
FARP1-229ENST00000600190 NUDT16Q96DE0 195 aaKnown RBP27.43■■□□□ 1.98
FARP1-229ENST00000600190 NRAPQ86VF7 1730 aa27.42■■□□□ 1.98
FARP1-229ENST00000600190 ARHGEF28Q8N1W1 1705 aaKnown RBP27.42■■□□□ 1.98
FARP1-229ENST00000600190 COL14A1Q05707 1796 aaKnown RBP27.42■■□□□ 1.98
FARP1-229ENST00000600190 CDK19Q9BWU1 502 aa27.39■■□□□ 1.98
FARP1-229ENST00000600190 PRDM11Q9NQV5 511 aa27.38■■□□□ 1.97
FARP1-229ENST00000600190 ITSN1Q15811 1721 aa27.38■■□□□ 1.97
FARP1-229ENST00000600190 ATP7BP35670 1465 aa27.38■■□□□ 1.97
FARP1-229ENST00000600190 TRIM26Q12899 539 aaPredicted RBP27.36■■□□□ 1.97
FARP1-229ENST00000600190 CRYBG1Q9Y4K1 1723 aa27.35■■□□□ 1.97
FARP1-229ENST00000600190 SPATA31A5Q5VU36 1347 aa27.34■■□□□ 1.97
FARP1-229ENST00000600190 SPATA31A7Q8IWB4 1347 aa27.34■■□□□ 1.97
FARP1-229ENST00000600190 NUTM2GQ5VZR2 741 aa27.33■■□□□ 1.97
FARP1-229ENST00000600190 FAM182BQ5T319 152 aa27.32■■□□□ 1.96
FARP1-229ENST00000600190 BAG6P46379 1132 aa27.31■■□□□ 1.96
FARP1-229ENST00000600190 CHRNA2Q15822 529 aa27.31■■□□□ 1.96
FARP1-229ENST00000600190 ACEP12821 1306 aa27.31■■□□□ 1.96
FARP1-229ENST00000600190 KIAA0232Q92628 1395 aa27.31■■□□□ 1.96
FARP1-229ENST00000600190 ZC3H6P61129 1189 aaKnown RBP27.3■■□□□ 1.96
FARP1-229ENST00000600190 NBPF1Q3BBV0 1214 aa27.3■■□□□ 1.96
FARP1-229ENST00000600190 NBPF8Q3BBV2 869 aa27.3■■□□□ 1.96
FARP1-229ENST00000600190 CCDC61Q9Y6R9 512 aa27.3■■□□□ 1.96
FARP1-229ENST00000600190 STRN4Q9NRL3 753 aa27.29■■□□□ 1.96
FARP1-229ENST00000600190 KIAA1210Q9ULL0 1709 aa27.27■■□□□ 1.96
FARP1-229ENST00000600190 POLR3AO14802 1390 aaPredicted RBP27.27■■□□□ 1.96
FARP1-229ENST00000600190 PHRF1Q9P1Y6 1649 aaKnown RBP27.26■■□□□ 1.95
FARP1-229ENST00000600190 SPATA31A1Q5TZJ5 1347 aa27.25■■□□□ 1.95
FARP1-229ENST00000600190 PLEKHG3A1L390 1219 aa27.25■■□□□ 1.95
FARP1-229ENST00000600190 ABTB2Q8N961 1025 aa27.25■■□□□ 1.95
FARP1-229ENST00000600190 TOPAZ1Q8N9V7 1692 aa27.24■■□□□ 1.95
FARP1-229ENST00000600190 EVA1CP58658 441 aa27.23■■□□□ 1.95
FARP1-229ENST00000600190 SRPK2P78362 688 aaKnown RBP27.23■■□□□ 1.95
FARP1-229ENST00000600190 EN1Q05925 392 aaPredicted RBP27.23■■□□□ 1.95
FARP1-229ENST00000600190 USP35Q9P2H5 1018 aa27.23■■□□□ 1.95
FARP1-229ENST00000600190 THSD7AQ9UPZ6 1657 aa27.22■■□□□ 1.95
FARP1-229ENST00000600190 PSDA5PKW4 1024 aaPredicted RBP27.22■■□□□ 1.95
FARP1-229ENST00000600190 RGPD1P0DJD0 1748 aa27.2■■□□□ 1.94
FARP1-229ENST00000600190 CENPJQ9HC77 1338 aaPredicted RBP27.19■■□□□ 1.94
FARP1-229ENST00000600190 CABP2Q9NPB3 220 aa27.19■■□□□ 1.94
FARP1-229ENST00000600190 PPIP5K1Q6PFW1 1433 aa27.17■■□□□ 1.94
FARP1-229ENST00000600190 FAM196AQ6ZSG2 479 aa27.15■■□□□ 1.94
FARP1-229ENST00000600190 NLRP13Q86W25 1043 aa27.15■■□□□ 1.94
FARP1-229ENST00000600190 NRKQ7Z2Y5 1582 aa27.14■■□□□ 1.94
FARP1-229ENST00000600190 TRIM37O94972 964 aa27.14■■□□□ 1.94
FARP1-229ENST00000600190 LARP1Q6PKG0 1096 aaKnown RBP27.14■■□□□ 1.94
FARP1-229ENST00000600190 SSH2Q76I76 1423 aa27.14■■□□□ 1.93
FARP1-229ENST00000600190 USP19O94966 1318 aa27.13■■□□□ 1.93
FARP1-229ENST00000600190 CAMTA1Q9Y6Y1 1673 aa27.12■■□□□ 1.93
FARP1-229ENST00000600190 GCP02774 474 aa27.12■■□□□ 1.93
FARP1-229ENST00000600190 PDE3BQ13370 1112 aa27.12■■□□□ 1.93
FARP1-229ENST00000600190 EZH2Q15910 746 aaKnown RBP27.12■■□□□ 1.93
FARP1-229ENST00000600190 BARGINQ6ZT62 677 aa27.12■■□□□ 1.93
FARP1-229ENST00000600190 CPDO75976 1380 aa27.11■■□□□ 1.93
FARP1-229ENST00000600190 TNS1Q9HBL0 1735 aaKnown RBP27.11■■□□□ 1.93
FARP1-229ENST00000600190 CABP1Q9NZU7 370 aa27.11■■□□□ 1.93
FARP1-229ENST00000600190 LRP5O75197 1615 aa27.1■■□□□ 1.93
FARP1-229ENST00000600190 L3MBTL2Q969R5 705 aa27.1■■□□□ 1.93
FARP1-229ENST00000600190 QRICH2Q9H0J4 1663 aa27.1■■□□□ 1.93
FARP1-229ENST00000600190 DISP2A7MBM2 1401 aa27.09■■□□□ 1.93
FARP1-229ENST00000600190 R3HDM1Q15032 1099 aaKnown RBP27.09■■□□□ 1.93
FARP1-229ENST00000600190 TCP11L2Q8N4U5 519 aa27.09■■□□□ 1.93
FARP1-229ENST00000600190 ZBTB7CA1YPR0 619 aa27.08■■□□□ 1.93
FARP1-229ENST00000600190 APBA3O96018 575 aa27.08■■□□□ 1.93
FARP1-229ENST00000600190 LMO7Q8WWI1 1683 aa27.07■■□□□ 1.92
FARP1-229ENST00000600190 NLRP6P59044 892 aa27.06■■□□□ 1.92
FARP1-229ENST00000600190 CAMKK2Q96RR4 588 aa27.06■■□□□ 1.92
FARP1-229ENST00000600190 SIN3AQ96ST3 1273 aa27.05■■□□□ 1.92
FARP1-229ENST00000600190 BRD4O60885 1362 aaPredicted RBP27.05■■□□□ 1.92
FARP1-229ENST00000600190 THRAP3Q9Y2W1 955 aaKnown RBP27.04■■□□□ 1.92
FARP1-229ENST00000600190 USP6P35125 1406 aa27.03■■□□□ 1.92
FARP1-229ENST00000600190 EVC2Q86UK5 1308 aa27.03■■□□□ 1.92
FARP1-229ENST00000600190 NEUROD1Q13562 356 aa27.02■■□□□ 1.92
FARP1-229ENST00000600190 COL5A2P05997 1499 aaPredicted RBP27.01■■□□□ 1.91
FARP1-229ENST00000600190 CRB1P82279 1406 aa26.98■■□□□ 1.91
FARP1-229ENST00000600190 TRPM1Q7Z4N2 1603 aa26.98■■□□□ 1.91
FARP1-229ENST00000600190 PARD3Q8TEW0 1356 aa26.97■■□□□ 1.91
FARP1-229ENST00000600190 ROCK2O75116 1388 aaKnown RBP26.97■■□□□ 1.91
FARP1-229ENST00000600190 AATKQ6ZMQ8 1374 aa26.96■■□□□ 1.91
FARP1-229ENST00000600190 PCGF6Q9BYE7 350 aa26.95■■□□□ 1.9
FARP1-229ENST00000600190 SLIT3O75094 1523 aa26.95■■□□□ 1.9
FARP1-229ENST00000600190 TOM1L2Q6ZVM7 507 aa26.94■■□□□ 1.9
FARP1-229ENST00000600190 PARP4Q9UKK3 1724 aaKnown RBP26.93■■□□□ 1.9
FARP1-229ENST00000600190 PIK3C2AO00443 1686 aa26.93■■□□□ 1.9
FARP1-229ENST00000600190 ZNF692Q9BU19 519 aaPredicted RBP26.93■■□□□ 1.9
FARP1-229ENST00000600190 SOX12O15370 315 aa26.91■■□□□ 1.9
FARP1-229ENST00000600190 NBPF14Q5TI25 921 aa26.91■■□□□ 1.9
FARP1-229ENST00000600190 AXIN2Q9Y2T1 843 aa26.91■■□□□ 1.9
FARP1-229ENST00000600190 TTC21BQ7Z4L5 1316 aa26.9■■□□□ 1.9
FARP1-229ENST00000600190 DDB1Q16531 1140 aa26.9■■□□□ 1.9
FARP1-229ENST00000600190 RREB1Q92766 1687 aa26.89■■□□□ 1.9
FARP1-229ENST00000600190 C11orf95C9JLR9 678 aaPredicted RBP26.89■■□□□ 1.9
FARP1-229ENST00000600190 KCNH5Q8NCM2 988 aa26.88■■□□□ 1.89
FARP1-229ENST00000600190 COL18A1P39060 1754 aa26.87■■□□□ 1.89
FARP1-229ENST00000600190 ARHGEF25Q86VW2 580 aa26.87■■□□□ 1.89
FARP1-229ENST00000600190 OVOS2A0A0G2JMS6 1433 aa26.87■■□□□ 1.89
FARP1-229ENST00000600190 OVOS2A0A0J9YW53 1432 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms