RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 CARD11Q9BXL7 1154 aa11.37□□□□□ -0.59
CHMP2A-205ENST00000600006 BCL9LQ86UU0 1499 aa11.37□□□□□ -0.59
CHMP2A-205ENST00000600006 ACEP12821 1306 aa11.36□□□□□ -0.59
CHMP2A-205ENST00000600006 EVC2Q86UK5 1308 aa11.36□□□□□ -0.59
CHMP2A-205ENST00000600006 COL14A1Q05707 1796 aaKnown RBP11.36□□□□□ -0.59
CHMP2A-205ENST00000600006 MON2Q7Z3U7 1717 aa11.36□□□□□ -0.59
CHMP2A-205ENST00000600006 CABP2Q9NPB3 220 aa11.36□□□□□ -0.59
CHMP2A-205ENST00000600006 RGS12O14924 1447 aa11.35□□□□□ -0.59
CHMP2A-205ENST00000600006 USP21Q9UK80 565 aa11.35□□□□□ -0.59
CHMP2A-205ENST00000600006 BRD4O60885 1362 aaPredicted RBP11.35□□□□□ -0.59
CHMP2A-205ENST00000600006 USP6P35125 1406 aa11.35□□□□□ -0.59
CHMP2A-205ENST00000600006 PIK3C2AO00443 1686 aa11.34□□□□□ -0.59
CHMP2A-205ENST00000600006 GLI3P10071 1580 aa11.34□□□□□ -0.59
CHMP2A-205ENST00000600006 ATAD2Q6PL18 1390 aa11.34□□□□□ -0.59
CHMP2A-205ENST00000600006 RXRBP28702 533 aa11.34□□□□□ -0.59
CHMP2A-205ENST00000600006 LMOD2Q6P5Q4 547 aa11.34□□□□□ -0.59
CHMP2A-205ENST00000600006 CABLES1Q8TDN4 633 aa11.34□□□□□ -0.59
CHMP2A-205ENST00000600006 TIMELESSQ9UNS1 1208 aa11.34□□□□□ -0.59
CHMP2A-205ENST00000600006 RBM6P78332 1123 aaKnown RBP11.33□□□□□ -0.6
CHMP2A-205ENST00000600006 QTRT2Q9H974 415 aaKnown RBP11.33□□□□□ -0.6
CHMP2A-205ENST00000600006 TRPC5Q9UL62 973 aaPredicted RBP11.33□□□□□ -0.6
CHMP2A-205ENST00000600006 SSH2Q76I76 1423 aa11.33□□□□□ -0.6
CHMP2A-205ENST00000600006 PAK3O75914 559 aaPredicted RBP11.32□□□□□ -0.6
CHMP2A-205ENST00000600006 HAP1P54257 671 aaPredicted RBP11.32□□□□□ -0.6
CHMP2A-205ENST00000600006 USP54Q70EL1 1684 aa11.32□□□□□ -0.6
CHMP2A-205ENST00000600006 SLIT3O75094 1523 aa11.31□□□□□ -0.6
CHMP2A-205ENST00000600006 CABP1Q9NZU7 370 aa11.31□□□□□ -0.6
CHMP2A-205ENST00000600006 CPSF1Q10570 1443 aaKnown RBP11.31□□□□□ -0.6
CHMP2A-205ENST00000600006 USP19O94966 1318 aa11.31□□□□□ -0.6
CHMP2A-205ENST00000600006 LMO7Q8WWI1 1683 aa11.3□□□□□ -0.6
CHMP2A-205ENST00000600006 UNC5CLQ8IV45 518 aa11.3□□□□□ -0.6
CHMP2A-205ENST00000600006 CD163L1Q9NR16 1453 aa11.3□□□□□ -0.6
CHMP2A-205ENST00000600006 USP47Q96K76 1375 aa11.29□□□□□ -0.6
CHMP2A-205ENST00000600006 PLEKHG5O94827 1062 aa11.29□□□□□ -0.6
CHMP2A-205ENST00000600006 TESK2Q96S53 571 aa11.29□□□□□ -0.6
CHMP2A-205ENST00000600006 FAM83GA6ND36 823 aa11.28□□□□□ -0.6
CHMP2A-205ENST00000600006 PUS7Q96PZ0 661 aaKnown RBP11.28□□□□□ -0.6
CHMP2A-205ENST00000600006 CPDO75976 1380 aa11.28□□□□□ -0.6
CHMP2A-205ENST00000600006 KIAA0232Q92628 1395 aa11.28□□□□□ -0.6
CHMP2A-205ENST00000600006 ST20-MTHFSA0A0A6YYL1 179 aa11.27□□□□□ -0.61
CHMP2A-205ENST00000600006 VPS72Q15906 364 aa11.27□□□□□ -0.61
CHMP2A-205ENST00000600006 ABTB2Q8N961 1025 aa11.27□□□□□ -0.61
CHMP2A-205ENST00000600006 CCER1Q8TC90 406 aaPredicted RBP11.27□□□□□ -0.61
CHMP2A-205ENST00000600006 GJD4Q96KN9 370 aaPredicted RBP11.27□□□□□ -0.61
CHMP2A-205ENST00000600006 BRWD3Q6RI45 1802 aa11.27□□□□□ -0.61
CHMP2A-205ENST00000600006 NUTM2GQ5VZR2 741 aa11.26□□□□□ -0.61
CHMP2A-205ENST00000600006 NLRP13Q86W25 1043 aa11.26□□□□□ -0.61
CHMP2A-205ENST00000600006 ZNF692Q9BU19 519 aaPredicted RBP11.26□□□□□ -0.61
CHMP2A-205ENST00000600006 PRDM11Q9NQV5 511 aa11.26□□□□□ -0.61
CHMP2A-205ENST00000600006 TTC21AQ8NDW8 1320 aa11.26□□□□□ -0.61
CHMP2A-205ENST00000600006 MYOM1P52179 1685 aa11.26□□□□□ -0.61
CHMP2A-205ENST00000600006 KTN1Q86UP2 1357 aaKnown RBP11.26□□□□□ -0.61
CHMP2A-205ENST00000600006 NINLQ9Y2I6 1382 aa11.26□□□□□ -0.61
CHMP2A-205ENST00000600006 COL18A1P39060 1754 aa11.26□□□□□ -0.61
CHMP2A-205ENST00000600006 THSD7AQ9UPZ6 1657 aa11.25□□□□□ -0.61
CHMP2A-205ENST00000600006 SLC24A1O60721 1099 aa11.25□□□□□ -0.61
CHMP2A-205ENST00000600006 TTC21BQ7Z4L5 1316 aa11.25□□□□□ -0.61
CHMP2A-205ENST00000600006 NFAT5O94916 1531 aa11.25□□□□□ -0.61
CHMP2A-205ENST00000600006 CAMTA1Q9Y6Y1 1673 aa11.24□□□□□ -0.61
CHMP2A-205ENST00000600006 BTG4Q9NY30 223 aa11.24□□□□□ -0.61
CHMP2A-205ENST00000600006 A0A1W2PP64 1363 aa11.24□□□□□ -0.61
CHMP2A-205ENST00000600006 EDC4Q6P2E9 1401 aaKnown RBP11.24□□□□□ -0.61
CHMP2A-205ENST00000600006 ABCC6O95255 1503 aa11.23□□□□□ -0.61
CHMP2A-205ENST00000600006 GCP02774 474 aa11.22□□□□□ -0.61
CHMP2A-205ENST00000600006 COL5A2P05997 1499 aaPredicted RBP11.22□□□□□ -0.61
CHMP2A-205ENST00000600006 NLRP6P59044 892 aa11.22□□□□□ -0.61
CHMP2A-205ENST00000600006 ZC3H6P61129 1189 aaKnown RBP11.22□□□□□ -0.61
CHMP2A-205ENST00000600006 CHRNA2Q15822 529 aa11.22□□□□□ -0.61
CHMP2A-205ENST00000600006 USP31Q70CQ4 1352 aa11.22□□□□□ -0.61
CHMP2A-205ENST00000600006 UPF1Q92900 1129 aaKnown RBP eCLIP11.22□□□□□ -0.61
CHMP2A-205ENST00000600006 WNK3Q9BYP7 1800 aa11.22□□□□□ -0.61
CHMP2A-205ENST00000600006 LTN1O94822 1766 aa11.21□□□□□ -0.61
CHMP2A-205ENST00000600006 RGPD5Q99666 1765 aa11.21□□□□□ -0.61
CHMP2A-205ENST00000600006 OVOS2A0A0J9YW53 1432 aa11.21□□□□□ -0.61
CHMP2A-205ENST00000600006 OVOS2Q6IE36 1432 aa11.21□□□□□ -0.61
CHMP2A-205ENST00000600006 SPATA31A5Q5VU36 1347 aa11.21□□□□□ -0.61
CHMP2A-205ENST00000600006 SPATA31A7Q8IWB4 1347 aa11.21□□□□□ -0.61
CHMP2A-205ENST00000600006 ONECUT3O60422 494 aaPredicted RBP11.21□□□□□ -0.61
CHMP2A-205ENST00000600006 TMF1P82094 1093 aa11.21□□□□□ -0.61
CHMP2A-205ENST00000600006 HDGFL2Q7Z4V5 671 aaPredicted RBP11.21□□□□□ -0.61
CHMP2A-205ENST00000600006 TMC1Q8TDI8 760 aa11.21□□□□□ -0.61
CHMP2A-205ENST00000600006 SLC12A5Q9H2X9 1139 aa11.21□□□□□ -0.61
CHMP2A-205ENST00000600006 AATKQ6ZMQ8 1374 aa11.2□□□□□ -0.62
CHMP2A-205ENST00000600006 ANKRD36BQ8N2N9 1353 aa11.2□□□□□ -0.62
CHMP2A-205ENST00000600006 TERF2IPQ9NYB0 399 aa11.2□□□□□ -0.62
CHMP2A-205ENST00000600006 CCDC9Q9Y3X0 531 aaKnown RBP11.2□□□□□ -0.62
CHMP2A-205ENST00000600006 KIF20BQ96Q89 1820 aa11.2□□□□□ -0.62
CHMP2A-205ENST00000600006 PARP4Q9UKK3 1724 aaKnown RBP11.18□□□□□ -0.62
CHMP2A-205ENST00000600006 SPATA31A1Q5TZJ5 1347 aa11.18□□□□□ -0.62
CHMP2A-205ENST00000600006 SEPT12Q8IYM1 358 aa11.18□□□□□ -0.62
CHMP2A-205ENST00000600006 KCNH5Q8NCM2 988 aa11.18□□□□□ -0.62
CHMP2A-205ENST00000600006 FAM98CQ17RN3 349 aaKnown RBP11.17□□□□□ -0.62
CHMP2A-205ENST00000600006 CDCA8Q53HL2 280 aa11.17□□□□□ -0.62
CHMP2A-205ENST00000600006 ARHGEF25Q86VW2 580 aa11.17□□□□□ -0.62
CHMP2A-205ENST00000600006 NME9Q86XW9 330 aa11.17□□□□□ -0.62
CHMP2A-205ENST00000600006 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.17□□□□□ -0.62
CHMP2A-205ENST00000600006 STRN4Q9NRL3 753 aa11.17□□□□□ -0.62
CHMP2A-205ENST00000600006 CRB1P82279 1406 aa11.17□□□□□ -0.62
CHMP2A-205ENST00000600006 ZRANB1Q9UGI0 708 aa11.16□□□□□ -0.62
CHMP2A-205ENST00000600006 LRRC37A3O60309 1634 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms