RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 SBNO2Q9Y2G9 1366 aa39.96■■■■□ 3.99
ZNF558-206ENST00000599938 CRYBG1Q9Y4K1 1723 aa39.91■■■■□ 3.98
ZNF558-206ENST00000599938 CDK12Q9NYV4 1490 aaPredicted RBP39.91■■■■□ 3.98
ZNF558-206ENST00000599938 BCL9LQ86UU0 1499 aa39.9■■■■□ 3.98
ZNF558-206ENST00000599938 TRPC5Q9UL62 973 aaPredicted RBP39.89■■■■□ 3.98
ZNF558-206ENST00000599938 TNKS1BP1Q9C0C2 1729 aaKnown RBP39.88■■■■□ 3.98
ZNF558-206ENST00000599938 SLIT2O94813 1529 aa39.88■■■■□ 3.97
ZNF558-206ENST00000599938 RBM6P78332 1123 aaKnown RBP39.88■■■■□ 3.97
ZNF558-206ENST00000599938 CABP1Q9NZU7 370 aa39.88■■■■□ 3.97
ZNF558-206ENST00000599938 ATRNO75882 1429 aa39.88■■■■□ 3.97
ZNF558-206ENST00000599938 PLCH1Q4KWH8 1693 aa39.86■■■■□ 3.97
ZNF558-206ENST00000599938 ATAD2Q6PL18 1390 aa39.86■■■■□ 3.97
ZNF558-206ENST00000599938 CCER1Q8TC90 406 aaPredicted RBP39.86■■■■□ 3.97
ZNF558-206ENST00000599938 TIMELESSQ9UNS1 1208 aa39.85■■■■□ 3.97
ZNF558-206ENST00000599938 PHRF1Q9P1Y6 1649 aaKnown RBP39.83■■■■□ 3.97
ZNF558-206ENST00000599938 RGS12O14924 1447 aa39.82■■■■□ 3.96
ZNF558-206ENST00000599938 USP6P35125 1406 aa39.82■■■■□ 3.96
ZNF558-206ENST00000599938 NWD2Q9ULI1 1742 aa39.81■■■■□ 3.96
ZNF558-206ENST00000599938 NUTM2GQ5VZR2 741 aa39.79■■■■□ 3.96
ZNF558-206ENST00000599938 UNC5CLQ8IV45 518 aa39.79■■■■□ 3.96
ZNF558-206ENST00000599938 BRD4O60885 1362 aaPredicted RBP39.79■■■■□ 3.96
ZNF558-206ENST00000599938 ABTB2Q8N961 1025 aa39.77■■■■□ 3.96
ZNF558-206ENST00000599938 AKAP12Q02952 1782 aa39.76■■■■□ 3.96
ZNF558-206ENST00000599938 COL14A1Q05707 1796 aaKnown RBP39.76■■■■□ 3.96
ZNF558-206ENST00000599938 USP47Q96K76 1375 aa39.73■■■■□ 3.95
ZNF558-206ENST00000599938 ST20-MTHFSA0A0A6YYL1 179 aa39.73■■■■□ 3.95
ZNF558-206ENST00000599938 FAM83GA6ND36 823 aa39.72■■■■□ 3.95
ZNF558-206ENST00000599938 NRKQ7Z2Y5 1582 aa39.72■■■■□ 3.95
ZNF558-206ENST00000599938 NRAPQ86VF7 1730 aa39.71■■■■□ 3.95
ZNF558-206ENST00000599938 SSH2Q76I76 1423 aa39.69■■■■□ 3.94
ZNF558-206ENST00000599938 TESK2Q96S53 571 aa39.69■■■■□ 3.94
ZNF558-206ENST00000599938 GJD4Q96KN9 370 aaPredicted RBP39.68■■■■□ 3.94
ZNF558-206ENST00000599938 PRDM11Q9NQV5 511 aa39.68■■■■□ 3.94
ZNF558-206ENST00000599938 USP19O94966 1318 aa39.67■■■■□ 3.94
ZNF558-206ENST00000599938 KIAA0232Q92628 1395 aa39.67■■■■□ 3.94
ZNF558-206ENST00000599938 GLI3P10071 1580 aa39.67■■■■□ 3.94
ZNF558-206ENST00000599938 PIK3C2AO00443 1686 aa39.67■■■■□ 3.94
ZNF558-206ENST00000599938 CPSF1Q10570 1443 aaKnown RBP39.66■■■■□ 3.94
ZNF558-206ENST00000599938 ZNF692Q9BU19 519 aaPredicted RBP39.66■■■■□ 3.94
ZNF558-206ENST00000599938 NLRP13Q86W25 1043 aa39.65■■■■□ 3.94
ZNF558-206ENST00000599938 MON2Q7Z3U7 1717 aa39.65■■■■□ 3.94
ZNF558-206ENST00000599938 BTG4Q9NY30 223 aa39.64■■■■□ 3.94
ZNF558-206ENST00000599938 KTN1Q86UP2 1357 aaKnown RBP39.62■■■■□ 3.93
ZNF558-206ENST00000599938 VPS72Q15906 364 aa39.62■■■■□ 3.93
ZNF558-206ENST00000599938 TMC1Q8TDI8 760 aa39.62■■■■□ 3.93
ZNF558-206ENST00000599938 ZC3H6P61129 1189 aaKnown RBP39.61■■■■□ 3.93
ZNF558-206ENST00000599938 SLC24A1O60721 1099 aa39.6■■■■□ 3.93
ZNF558-206ENST00000599938 CCDC9Q9Y3X0 531 aaKnown RBP39.6■■■■□ 3.93
ZNF558-206ENST00000599938 PUS7Q96PZ0 661 aaKnown RBP39.59■■■■□ 3.93
ZNF558-206ENST00000599938 TTC21BQ7Z4L5 1316 aa39.59■■■■□ 3.93
ZNF558-206ENST00000599938 CD163L1Q9NR16 1453 aa39.58■■■■□ 3.93
ZNF558-206ENST00000599938 NLRP6P59044 892 aa39.58■■■■□ 3.93
ZNF558-206ENST00000599938 CHRNA2Q15822 529 aa39.57■■■■□ 3.93
ZNF558-206ENST00000599938 SLIT3O75094 1523 aa39.56■■■■□ 3.92
ZNF558-206ENST00000599938 TTC21AQ8NDW8 1320 aa39.56■■■■□ 3.92
ZNF558-206ENST00000599938 CPDO75976 1380 aa39.54■■■■□ 3.92
ZNF558-206ENST00000599938 GCP02774 474 aa39.53■■■■□ 3.92
ZNF558-206ENST00000599938 HDGFL2Q7Z4V5 671 aaPredicted RBP39.53■■■■□ 3.92
ZNF558-206ENST00000599938 SLC12A5Q9H2X9 1139 aa39.53■■■■□ 3.92
ZNF558-206ENST00000599938 NINLQ9Y2I6 1382 aa39.52■■■■□ 3.92
ZNF558-206ENST00000599938 TMF1P82094 1093 aa39.51■■■■□ 3.92
ZNF558-206ENST00000599938 A0A1W2PP64 1363 aa39.49■■■■□ 3.91
ZNF558-206ENST00000599938 TERF2IPQ9NYB0 399 aa39.49■■■■□ 3.91
ZNF558-206ENST00000599938 LMO7Q8WWI1 1683 aa39.48■■■■□ 3.91
ZNF558-206ENST00000599938 UPF1Q92900 1129 aaKnown RBP eCLIP39.48■■■■□ 3.91
ZNF558-206ENST00000599938 EDC4Q6P2E9 1401 aaKnown RBP39.46■■■■□ 3.91
ZNF558-206ENST00000599938 SUGP2Q8IX01 1082 aaKnown RBP eCLIP39.45■■■■□ 3.91
ZNF558-206ENST00000599938 EP400Q96L91 3159 aa39.44■■■■□ 3.9
ZNF558-206ENST00000599938 STRN4Q9NRL3 753 aa39.43■■■■□ 3.9
ZNF558-206ENST00000599938 CAMTA1Q9Y6Y1 1673 aa39.42■■■■□ 3.9
ZNF558-206ENST00000599938 SPATA31A5Q5VU36 1347 aa39.41■■■■□ 3.9
ZNF558-206ENST00000599938 SPATA31A7Q8IWB4 1347 aa39.41■■■■□ 3.9
ZNF558-206ENST00000599938 ZBTB7CA1YPR0 619 aa39.41■■■■□ 3.9
ZNF558-206ENST00000599938 BRWD3Q6RI45 1802 aa39.41■■■■□ 3.9
ZNF558-206ENST00000599938 USP54Q70EL1 1684 aa39.41■■■■□ 3.9
ZNF558-206ENST00000599938 SEPT12Q8IYM1 358 aa39.4■■■■□ 3.9
ZNF558-206ENST00000599938 A0A0G2JS52 829 aa39.38■■■■□ 3.89
ZNF558-206ENST00000599938 MYT1Q01538 1121 aa39.38■■■■□ 3.89
ZNF558-206ENST00000599938 FAM98CQ17RN3 349 aaKnown RBP39.38■■■■□ 3.89
ZNF558-206ENST00000599938 CDCA8Q53HL2 280 aa39.38■■■■□ 3.89
ZNF558-206ENST00000599938 KCNH5Q8NCM2 988 aa39.38■■■■□ 3.89
ZNF558-206ENST00000599938 SOX12O15370 315 aa39.37■■■■□ 3.89
ZNF558-206ENST00000599938 NME9Q86XW9 330 aa39.37■■■■□ 3.89
ZNF558-206ENST00000599938 USP31Q70CQ4 1352 aa39.36■■■■□ 3.89
ZNF558-206ENST00000599938 NFAT5O94916 1531 aa39.36■■■■□ 3.89
ZNF558-206ENST00000599938 ONECUT3O60422 494 aaPredicted RBP39.36■■■■□ 3.89
ZNF558-206ENST00000599938 EVA1CP58658 441 aa39.36■■■■□ 3.89
ZNF558-206ENST00000599938 COL5A2P05997 1499 aaPredicted RBP39.35■■■■□ 3.89
ZNF558-206ENST00000599938 AATKQ6ZMQ8 1374 aa39.34■■■■□ 3.89
ZNF558-206ENST00000599938 ANKRD36BQ8N2N9 1353 aa39.34■■■■□ 3.89
ZNF558-206ENST00000599938 ZRANB1Q9UGI0 708 aa39.34■■■■□ 3.89
ZNF558-206ENST00000599938 SPATA31A1Q5TZJ5 1347 aa39.33■■■■□ 3.89
ZNF558-206ENST00000599938 THSD7AQ9UPZ6 1657 aa39.31■■■■□ 3.88
ZNF558-206ENST00000599938 COL18A1P39060 1754 aa39.31■■■■□ 3.88
ZNF558-206ENST00000599938 LARP1Q6PKG0 1096 aaKnown RBP39.29■■■■□ 3.88
ZNF558-206ENST00000599938 EIF4G2P78344 907 aaKnown RBP eCLIP39.28■■■■□ 3.88
ZNF558-206ENST00000599938 ARHGEF25Q86VW2 580 aa39.28■■■■□ 3.88
ZNF558-206ENST00000599938 MYOM1P52179 1685 aa39.28■■■■□ 3.88
ZNF558-206ENST00000599938 OVOS2A0A0J9YW53 1432 aa39.27■■■■□ 3.88
ZNF558-206ENST00000599938 OVOS2Q6IE36 1432 aa39.27■■■■□ 3.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms