RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 SPATA31A5Q5VU36 1347 aa18.3■□□□□ 0.52
HOMER3-211ENST00000599808 SPATA31A7Q8IWB4 1347 aa18.3■□□□□ 0.52
HOMER3-211ENST00000599808 PRR36Q9H6K5 1346 aa18.3■□□□□ 0.52
HOMER3-211ENST00000599808 HIRIP3Q9BW71 556 aaPredicted RBP18.3■□□□□ 0.52
HOMER3-211ENST00000599808 GPRASP1Q5JY77 1395 aa18.3■□□□□ 0.52
HOMER3-211ENST00000599808 ACIN1Q9UKV3 1341 aaKnown RBP18.29■□□□□ 0.52
HOMER3-211ENST00000599808 TULP4Q9NRJ4 1543 aa18.28■□□□□ 0.52
HOMER3-211ENST00000599808 MINK1Q8N4C8 1332 aaPredicted RBP18.27■□□□□ 0.52
HOMER3-211ENST00000599808 DISP2A7MBM2 1401 aa18.27■□□□□ 0.52
HOMER3-211ENST00000599808 TRAK1Q9UPV9 953 aa18.27■□□□□ 0.52
HOMER3-211ENST00000599808 R3HDM1Q15032 1099 aaKnown RBP18.26■□□□□ 0.51
HOMER3-211ENST00000599808 EIF3AQ14152 1382 aaKnown RBP18.26■□□□□ 0.51
HOMER3-211ENST00000599808 WASLO00401 505 aaPredicted RBP18.24■□□□□ 0.51
HOMER3-211ENST00000599808 PRDM11Q9NQV5 511 aa18.24■□□□□ 0.51
HOMER3-211ENST00000599808 ITSN1Q15811 1721 aa18.23■□□□□ 0.51
HOMER3-211ENST00000599808 PAK3O75914 559 aaPredicted RBP18.23■□□□□ 0.51
HOMER3-211ENST00000599808 EZH2Q15910 746 aaKnown RBP18.23■□□□□ 0.51
HOMER3-211ENST00000599808 NGDNQ8NEJ9 315 aaKnown RBP18.23■□□□□ 0.51
HOMER3-211ENST00000599808 PHRF1Q9P1Y6 1649 aaKnown RBP18.23■□□□□ 0.51
HOMER3-211ENST00000599808 SPATA31A1Q5TZJ5 1347 aa18.22■□□□□ 0.51
HOMER3-211ENST00000599808 KIAA0232Q92628 1395 aa18.21■□□□□ 0.51
HOMER3-211ENST00000599808 ARHGEF28Q8N1W1 1705 aaKnown RBP18.2■□□□□ 0.5
HOMER3-211ENST00000599808 CAMKK2Q96RR4 588 aa18.2■□□□□ 0.5
HOMER3-211ENST00000599808 TRIM37O94972 964 aa18.19■□□□□ 0.5
HOMER3-211ENST00000599808 CHRNA2Q15822 529 aa18.19■□□□□ 0.5
HOMER3-211ENST00000599808 ATP7BP35670 1465 aa18.19■□□□□ 0.5
HOMER3-211ENST00000599808 FAM196AQ6ZSG2 479 aa18.18■□□□□ 0.5
HOMER3-211ENST00000599808 STRN4Q9NRL3 753 aa18.18■□□□□ 0.5
HOMER3-211ENST00000599808 KDM2AQ9Y2K7 1162 aa18.18■□□□□ 0.5
HOMER3-211ENST00000599808 RREB1Q92766 1687 aa18.18■□□□□ 0.5
HOMER3-211ENST00000599808 NUP188Q5SRE5 1749 aa18.16■□□□□ 0.5
HOMER3-211ENST00000599808 NUDT16Q96DE0 195 aaKnown RBP18.16■□□□□ 0.5
HOMER3-211ENST00000599808 APBA3O96018 575 aa18.15■□□□□ 0.5
HOMER3-211ENST00000599808 ZC3H6P61129 1189 aaKnown RBP18.15■□□□□ 0.5
HOMER3-211ENST00000599808 NUTM2GQ5VZR2 741 aa18.15■□□□□ 0.5
HOMER3-211ENST00000599808 DCAF11Q8TEB1 546 aa18.15■□□□□ 0.5
HOMER3-211ENST00000599808 TOPAZ1Q8N9V7 1692 aa18.15■□□□□ 0.5
HOMER3-211ENST00000599808 PARD3Q8TEW0 1356 aa18.15■□□□□ 0.5
HOMER3-211ENST00000599808 USP35Q9P2H5 1018 aa18.14■□□□□ 0.49
HOMER3-211ENST00000599808 RAB3GAP2Q9H2M9 1393 aa18.14■□□□□ 0.49
HOMER3-211ENST00000599808 SSH2Q76I76 1423 aa18.14■□□□□ 0.49
HOMER3-211ENST00000599808 NRKQ7Z2Y5 1582 aa18.13■□□□□ 0.49
HOMER3-211ENST00000599808 BARGINQ6ZT62 677 aa18.12■□□□□ 0.49
HOMER3-211ENST00000599808 LMO7Q8WWI1 1683 aa18.12■□□□□ 0.49
HOMER3-211ENST00000599808 CAMTA1Q9Y6Y1 1673 aa18.12■□□□□ 0.49
HOMER3-211ENST00000599808 POLR3AO14802 1390 aaPredicted RBP18.11■□□□□ 0.49
HOMER3-211ENST00000599808 ACEP12821 1306 aa18.1■□□□□ 0.49
HOMER3-211ENST00000599808 EVA1CP58658 441 aa18.1■□□□□ 0.49
HOMER3-211ENST00000599808 PDE3BQ13370 1112 aa18.1■□□□□ 0.49
HOMER3-211ENST00000599808 CDK19Q9BWU1 502 aa18.1■□□□□ 0.49
HOMER3-211ENST00000599808 LARP1Q6PKG0 1096 aaKnown RBP18.09■□□□□ 0.49
HOMER3-211ENST00000599808 STAC3Q96MF2 364 aa18.09■□□□□ 0.49
HOMER3-211ENST00000599808 NBPF8Q3BBV2 869 aa18.08■□□□□ 0.48
HOMER3-211ENST00000599808 PARP4Q9UKK3 1724 aaKnown RBP18.08■□□□□ 0.48
HOMER3-211ENST00000599808 TCP11L2Q8N4U5 519 aa18.07■□□□□ 0.48
HOMER3-211ENST00000599808 CCDC61Q9Y6R9 512 aa18.07■□□□□ 0.48
HOMER3-211ENST00000599808 CPDO75976 1380 aa18.06■□□□□ 0.48
HOMER3-211ENST00000599808 NBPF14Q5TI25 921 aa18.06■□□□□ 0.48
HOMER3-211ENST00000599808 ABTB2Q8N961 1025 aa18.06■□□□□ 0.48
HOMER3-211ENST00000599808 USP19O94966 1318 aa18.05■□□□□ 0.48
HOMER3-211ENST00000599808 PLEKHG3A1L390 1219 aa18.05■□□□□ 0.48
HOMER3-211ENST00000599808 SBF2Q86WG5 1849 aa18.05■□□□□ 0.48
HOMER3-211ENST00000599808 PEAK1Q9H792 1746 aa18.03■□□□□ 0.48
HOMER3-211ENST00000599808 COL5A2P05997 1499 aaPredicted RBP18.03■□□□□ 0.48
HOMER3-211ENST00000599808 YY1P25490 414 aa18.03■□□□□ 0.48
HOMER3-211ENST00000599808 THRAP3Q9Y2W1 955 aaKnown RBP18.03■□□□□ 0.48
HOMER3-211ENST00000599808 KIAA1210Q9ULL0 1709 aa18.03■□□□□ 0.48
HOMER3-211ENST00000599808 RGPD3A6NKT7 1758 aaPredicted RBP18.02■□□□□ 0.47
HOMER3-211ENST00000599808 RGPD4Q7Z3J3 1758 aa18.02■□□□□ 0.47
HOMER3-211ENST00000599808 GCP02774 474 aa18.01■□□□□ 0.47
HOMER3-211ENST00000599808 NLRP13Q86W25 1043 aa18■□□□□ 0.47
HOMER3-211ENST00000599808 SPON1Q9HCB6 807 aa18■□□□□ 0.47
HOMER3-211ENST00000599808 LRRC37A3O60309 1634 aa17.99■□□□□ 0.47
HOMER3-211ENST00000599808 KCNQ2O43526 872 aa17.99■□□□□ 0.47
HOMER3-211ENST00000599808 PPP1R1BQ9UD71 204 aaPredicted RBP17.99■□□□□ 0.47
HOMER3-211ENST00000599808 OVOS2A0A0G2JMS6 1433 aa17.98■□□□□ 0.47
HOMER3-211ENST00000599808 OVOS2A0A0J9YW53 1432 aa17.98■□□□□ 0.47
HOMER3-211ENST00000599808 CRB1P82279 1406 aa17.98■□□□□ 0.47
HOMER3-211ENST00000599808 OVOS2Q6IE36 1432 aa17.98■□□□□ 0.47
HOMER3-211ENST00000599808 PPIP5K1Q6PFW1 1433 aa17.98■□□□□ 0.47
HOMER3-211ENST00000599808 CASZ1Q86V15 1759 aa17.97■□□□□ 0.47
HOMER3-211ENST00000599808 C11orf95C9JLR9 678 aaPredicted RBP17.97■□□□□ 0.47
HOMER3-211ENST00000599808 WNK3Q9BYP7 1800 aa17.97■□□□□ 0.47
HOMER3-211ENST00000599808 NINLQ9Y2I6 1382 aa17.96■□□□□ 0.47
HOMER3-211ENST00000599808 SRPK2P78362 688 aaKnown RBP17.96■□□□□ 0.47
HOMER3-211ENST00000599808 NBPF1Q3BBV0 1214 aa17.96■□□□□ 0.47
HOMER3-211ENST00000599808 COL18A1P39060 1754 aa17.96■□□□□ 0.47
HOMER3-211ENST00000599808 ZBTB7CA1YPR0 619 aa17.95■□□□□ 0.46
HOMER3-211ENST00000599808 CABP2Q9NPB3 220 aa17.95■□□□□ 0.46
HOMER3-211ENST00000599808 SLIT3O75094 1523 aa17.94■□□□□ 0.46
HOMER3-211ENST00000599808 PLSCR1O15162 318 aa17.94■□□□□ 0.46
HOMER3-211ENST00000599808 ANO8Q9HCE9 1232 aaPredicted RBP17.94■□□□□ 0.46
HOMER3-211ENST00000599808 AKAP12Q02952 1782 aa17.94■□□□□ 0.46
HOMER3-211ENST00000599808 QRICH2Q9H0J4 1663 aa17.93■□□□□ 0.46
HOMER3-211ENST00000599808 BRD4O60885 1362 aaPredicted RBP17.93■□□□□ 0.46
HOMER3-211ENST00000599808 AATKQ6ZMQ8 1374 aa17.93■□□□□ 0.46
HOMER3-211ENST00000599808 DDB1Q16531 1140 aa17.93■□□□□ 0.46
HOMER3-211ENST00000599808 PTF1AQ7RTS3 328 aa17.93■□□□□ 0.46
HOMER3-211ENST00000599808 RGPD5Q99666 1765 aa17.93■□□□□ 0.46
HOMER3-211ENST00000599808 PIK3C2AO00443 1686 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms