RNA–Protein interactions for RNA: ENST00000597704.1

KHSRP-209, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 5

Gene KHSRP, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-209ENST00000597704 PPIP5K1Q6PFW1 1433 aa22.66■■□□□ 1.22
KHSRP-209ENST00000597704 SLIT2O94813 1529 aa22.66■■□□□ 1.22
KHSRP-209ENST00000597704 CARD11Q9BXL7 1154 aa22.65■■□□□ 1.22
KHSRP-209ENST00000597704 AKAP12Q02952 1782 aa22.65■■□□□ 1.22
KHSRP-209ENST00000597704 PHRF1Q9P1Y6 1649 aaKnown RBP22.64■■□□□ 1.22
KHSRP-209ENST00000597704 EVC2Q86UK5 1308 aa22.64■■□□□ 1.22
KHSRP-209ENST00000597704 RBM6P78332 1123 aaKnown RBP22.64■■□□□ 1.21
KHSRP-209ENST00000597704 SBNO2Q9Y2G9 1366 aa22.63■■□□□ 1.21
KHSRP-209ENST00000597704 PLEKHG5O94827 1062 aa22.63■■□□□ 1.21
KHSRP-209ENST00000597704 PAK3O75914 559 aaPredicted RBP22.62■■□□□ 1.21
KHSRP-209ENST00000597704 TRPC5Q9UL62 973 aaPredicted RBP22.62■■□□□ 1.21
KHSRP-209ENST00000597704 RGS12O14924 1447 aa22.61■■□□□ 1.21
KHSRP-209ENST00000597704 HAP1P54257 671 aaPredicted RBP22.61■■□□□ 1.21
KHSRP-209ENST00000597704 NRAPQ86VF7 1730 aa22.61■■□□□ 1.21
KHSRP-209ENST00000597704 CLSPNQ9HAW4 1339 aa22.6■■□□□ 1.21
KHSRP-209ENST00000597704 COL14A1Q05707 1796 aaKnown RBP22.6■■□□□ 1.21
KHSRP-209ENST00000597704 CABP1Q9NZU7 370 aa22.58■■□□□ 1.21
KHSRP-209ENST00000597704 UNC5CLQ8IV45 518 aa22.57■■□□□ 1.2
KHSRP-209ENST00000597704 GLI3P10071 1580 aa22.57■■□□□ 1.2
KHSRP-209ENST00000597704 USP6P35125 1406 aa22.56■■□□□ 1.2
KHSRP-209ENST00000597704 BRD4O60885 1362 aaPredicted RBP22.55■■□□□ 1.2
KHSRP-209ENST00000597704 MON2Q7Z3U7 1717 aa22.55■■□□□ 1.2
KHSRP-209ENST00000597704 FAM83GA6ND36 823 aa22.55■■□□□ 1.2
KHSRP-209ENST00000597704 BRWD3Q6RI45 1802 aa22.54■■□□□ 1.2
KHSRP-209ENST00000597704 NRKQ7Z2Y5 1582 aa22.54■■□□□ 1.2
KHSRP-209ENST00000597704 ATAD2Q6PL18 1390 aa22.53■■□□□ 1.2
KHSRP-209ENST00000597704 PIK3C2AO00443 1686 aa22.53■■□□□ 1.2
KHSRP-209ENST00000597704 NUTM2GQ5VZR2 741 aa22.53■■□□□ 1.2
KHSRP-209ENST00000597704 SSH2Q76I76 1423 aa22.53■■□□□ 1.2
KHSRP-209ENST00000597704 GJD4Q96KN9 370 aaPredicted RBP22.52■■□□□ 1.2
KHSRP-209ENST00000597704 TIMELESSQ9UNS1 1208 aa22.51■■□□□ 1.19
KHSRP-209ENST00000597704 ABTB2Q8N961 1025 aa22.5■■□□□ 1.19
KHSRP-209ENST00000597704 USP19O94966 1318 aa22.5■■□□□ 1.19
KHSRP-209ENST00000597704 TESK2Q96S53 571 aa22.49■■□□□ 1.19
KHSRP-209ENST00000597704 CPSF1Q10570 1443 aaKnown RBP22.48■■□□□ 1.19
KHSRP-209ENST00000597704 VPS72Q15906 364 aa22.48■■□□□ 1.19
KHSRP-209ENST00000597704 KIAA0232Q92628 1395 aa22.48■■□□□ 1.19
KHSRP-209ENST00000597704 ST20-MTHFSA0A0A6YYL1 179 aa22.47■■□□□ 1.19
KHSRP-209ENST00000597704 ZNF692Q9BU19 519 aaPredicted RBP22.46■■□□□ 1.19
KHSRP-209ENST00000597704 PRDM11Q9NQV5 511 aa22.46■■□□□ 1.19
KHSRP-209ENST00000597704 BTG4Q9NY30 223 aa22.46■■□□□ 1.19
KHSRP-209ENST00000597704 CD163L1Q9NR16 1453 aa22.46■■□□□ 1.19
KHSRP-209ENST00000597704 LMO7Q8WWI1 1683 aa22.46■■□□□ 1.19
KHSRP-209ENST00000597704 NLRP13Q86W25 1043 aa22.45■■□□□ 1.18
KHSRP-209ENST00000597704 UPF1Q92900 1129 aaKnown RBP eCLIP22.45■■□□□ 1.18
KHSRP-209ENST00000597704 USP47Q96K76 1375 aa22.45■■□□□ 1.18
KHSRP-209ENST00000597704 SLIT3O75094 1523 aa22.45■■□□□ 1.18
KHSRP-209ENST00000597704 ZC3H6P61129 1189 aaKnown RBP22.44■■□□□ 1.18
KHSRP-209ENST00000597704 PUS7Q96PZ0 661 aaKnown RBP22.44■■□□□ 1.18
KHSRP-209ENST00000597704 USP54Q70EL1 1684 aa22.43■■□□□ 1.18
KHSRP-209ENST00000597704 TTC21BQ7Z4L5 1316 aa22.43■■□□□ 1.18
KHSRP-209ENST00000597704 CCER1Q8TC90 406 aaPredicted RBP22.43■■□□□ 1.18
KHSRP-209ENST00000597704 CPDO75976 1380 aa22.42■■□□□ 1.18
KHSRP-209ENST00000597704 KTN1Q86UP2 1357 aaKnown RBP22.42■■□□□ 1.18
KHSRP-209ENST00000597704 CHRNA2Q15822 529 aa22.42■■□□□ 1.18
KHSRP-209ENST00000597704 COL18A1P39060 1754 aa22.41■■□□□ 1.18
KHSRP-209ENST00000597704 RGPD5Q99666 1765 aa22.41■■□□□ 1.18
KHSRP-209ENST00000597704 CAMTA1Q9Y6Y1 1673 aa22.4■■□□□ 1.18
KHSRP-209ENST00000597704 GCP02774 474 aa22.4■■□□□ 1.18
KHSRP-209ENST00000597704 NLRP6P59044 892 aa22.4■■□□□ 1.18
KHSRP-209ENST00000597704 TTC21AQ8NDW8 1320 aa22.39■■□□□ 1.18
KHSRP-209ENST00000597704 SLC12A5Q9H2X9 1139 aa22.39■■□□□ 1.17
KHSRP-209ENST00000597704 CCDC9Q9Y3X0 531 aaKnown RBP22.39■■□□□ 1.17
KHSRP-209ENST00000597704 ONECUT3O60422 494 aaPredicted RBP22.38■■□□□ 1.17
KHSRP-209ENST00000597704 TMC1Q8TDI8 760 aa22.38■■□□□ 1.17
KHSRP-209ENST00000597704 EP400Q96L91 3159 aa22.38■■□□□ 1.17
KHSRP-209ENST00000597704 SPATA31A5Q5VU36 1347 aa22.37■■□□□ 1.17
KHSRP-209ENST00000597704 SPATA31A7Q8IWB4 1347 aa22.37■■□□□ 1.17
KHSRP-209ENST00000597704 SLC24A1O60721 1099 aa22.37■■□□□ 1.17
KHSRP-209ENST00000597704 THSD7AQ9UPZ6 1657 aa22.36■■□□□ 1.17
KHSRP-209ENST00000597704 SEPT12Q8IYM1 358 aa22.36■■□□□ 1.17
KHSRP-209ENST00000597704 A0A1W2PP64 1363 aa22.35■■□□□ 1.17
KHSRP-209ENST00000597704 NINLQ9Y2I6 1382 aa22.35■■□□□ 1.17
KHSRP-209ENST00000597704 NFAT5O94916 1531 aa22.34■■□□□ 1.17
KHSRP-209ENST00000597704 EDC4Q6P2E9 1401 aaKnown RBP22.33■■□□□ 1.17
KHSRP-209ENST00000597704 LTN1O94822 1766 aa22.33■■□□□ 1.17
KHSRP-209ENST00000597704 HDGFL2Q7Z4V5 671 aaPredicted RBP22.33■■□□□ 1.17
KHSRP-209ENST00000597704 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.32■■□□□ 1.16
KHSRP-209ENST00000597704 STRN4Q9NRL3 753 aa22.32■■□□□ 1.16
KHSRP-209ENST00000597704 TERF2IPQ9NYB0 399 aa22.32■■□□□ 1.16
KHSRP-209ENST00000597704 USP31Q70CQ4 1352 aa22.32■■□□□ 1.16
KHSRP-209ENST00000597704 MYOM1P52179 1685 aa22.32■■□□□ 1.16
KHSRP-209ENST00000597704 SPATA31A1Q5TZJ5 1347 aa22.31■■□□□ 1.16
KHSRP-209ENST00000597704 TMF1P82094 1093 aa22.31■■□□□ 1.16
KHSRP-209ENST00000597704 FAM98CQ17RN3 349 aaKnown RBP22.31■■□□□ 1.16
KHSRP-209ENST00000597704 COL5A2P05997 1499 aaPredicted RBP22.3■■□□□ 1.16
KHSRP-209ENST00000597704 AATKQ6ZMQ8 1374 aa22.3■■□□□ 1.16
KHSRP-209ENST00000597704 ZRANB1Q9UGI0 708 aa22.3■■□□□ 1.16
KHSRP-209ENST00000597704 NME9Q86XW9 330 aa22.29■■□□□ 1.16
KHSRP-209ENST00000597704 KCNH5Q8NCM2 988 aa22.28■■□□□ 1.16
KHSRP-209ENST00000597704 WNK3Q9BYP7 1800 aa22.27■■□□□ 1.16
KHSRP-209ENST00000597704 EVA1CP58658 441 aa22.27■■□□□ 1.16
KHSRP-209ENST00000597704 LARP1Q6PKG0 1096 aaKnown RBP22.27■■□□□ 1.16
KHSRP-209ENST00000597704 ARHGEF25Q86VW2 580 aa22.27■■□□□ 1.16
KHSRP-209ENST00000597704 ZBTB7CA1YPR0 619 aa22.26■■□□□ 1.15
KHSRP-209ENST00000597704 ABCC6O95255 1503 aa22.26■■□□□ 1.15
KHSRP-209ENST00000597704 ANKRD36BQ8N2N9 1353 aa22.25■■□□□ 1.15
KHSRP-209ENST00000597704 OVOS2A0A0J9YW53 1432 aa22.25■■□□□ 1.15
KHSRP-209ENST00000597704 OVOS2Q6IE36 1432 aa22.25■■□□□ 1.15
KHSRP-209ENST00000597704 KRT27Q7Z3Y8 459 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms