RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 C14orf93Q9H972 538 aaKnown RBP16.42■□□□□ 0.22
ZNF548-207ENST00000597400 SPATA31A5Q5VU36 1347 aa16.42■□□□□ 0.22
ZNF548-207ENST00000597400 SPATA31A7Q8IWB4 1347 aa16.42■□□□□ 0.22
ZNF548-207ENST00000597400 CFAP70Q5T0N1 1121 aa16.41■□□□□ 0.22
ZNF548-207ENST00000597400 ITSN1Q15811 1721 aa16.41■□□□□ 0.22
ZNF548-207ENST00000597400 TULP4Q9NRJ4 1543 aa16.4■□□□□ 0.22
ZNF548-207ENST00000597400 EZH2Q15910 746 aaKnown RBP16.4■□□□□ 0.22
ZNF548-207ENST00000597400 PRR36Q9H6K5 1346 aa16.4■□□□□ 0.22
ZNF548-207ENST00000597400 ARHGEF28Q8N1W1 1705 aaKnown RBP16.39■□□□□ 0.21
ZNF548-207ENST00000597400 DHX57Q6P158 1386 aaKnown RBP16.38■□□□□ 0.21
ZNF548-207ENST00000597400 MPHOSPH9Q99550 1183 aa16.38■□□□□ 0.21
ZNF548-207ENST00000597400 ACIN1Q9UKV3 1341 aaKnown RBP16.37■□□□□ 0.21
ZNF548-207ENST00000597400 TOPAZ1Q8N9V7 1692 aa16.37■□□□□ 0.21
ZNF548-207ENST00000597400 CAMKK2Q96RR4 588 aa16.36■□□□□ 0.21
ZNF548-207ENST00000597400 HIRIP3Q9BW71 556 aaPredicted RBP16.36■□□□□ 0.21
ZNF548-207ENST00000597400 CAMTA1Q9Y6Y1 1673 aa16.36■□□□□ 0.21
ZNF548-207ENST00000597400 NRKQ7Z2Y5 1582 aa16.35■□□□□ 0.21
ZNF548-207ENST00000597400 UTRNP46939 3433 aa16.35■□□□□ 0.21
ZNF548-207ENST00000597400 LMO7Q8WWI1 1683 aa16.34■□□□□ 0.21
ZNF548-207ENST00000597400 SPATA31A1Q5TZJ5 1347 aa16.34■□□□□ 0.21
ZNF548-207ENST00000597400 ATP7BP35670 1465 aa16.34■□□□□ 0.21
ZNF548-207ENST00000597400 TRIM37O94972 964 aa16.33■□□□□ 0.2
ZNF548-207ENST00000597400 KIAA0232Q92628 1395 aa16.33■□□□□ 0.2
ZNF548-207ENST00000597400 SBF2Q86WG5 1849 aa16.33■□□□□ 0.2
ZNF548-207ENST00000597400 GPRASP1Q5JY77 1395 aa16.32■□□□□ 0.2
ZNF548-207ENST00000597400 PARP4Q9UKK3 1724 aaKnown RBP16.32■□□□□ 0.2
ZNF548-207ENST00000597400 MINK1Q8N4C8 1332 aaPredicted RBP16.31■□□□□ 0.2
ZNF548-207ENST00000597400 CHRNA2Q15822 529 aa16.31■□□□□ 0.2
ZNF548-207ENST00000597400 PRDM11Q9NQV5 511 aa16.31■□□□□ 0.2
ZNF548-207ENST00000597400 POGKQ9P215 609 aa16.31■□□□□ 0.2
ZNF548-207ENST00000597400 PEAK1Q9H792 1746 aa16.31■□□□□ 0.2
ZNF548-207ENST00000597400 RGPD3A6NKT7 1758 aaPredicted RBP16.3■□□□□ 0.2
ZNF548-207ENST00000597400 RGPD4Q7Z3J3 1758 aa16.3■□□□□ 0.2
ZNF548-207ENST00000597400 CASZ1Q86V15 1759 aa16.3■□□□□ 0.2
ZNF548-207ENST00000597400 PARD3Q8TEW0 1356 aa16.29■□□□□ 0.2
ZNF548-207ENST00000597400 TRAK1Q9UPV9 953 aa16.29■□□□□ 0.2
ZNF548-207ENST00000597400 WNK3Q9BYP7 1800 aa16.29■□□□□ 0.2
ZNF548-207ENST00000597400 SSH2Q76I76 1423 aa16.28■□□□□ 0.2
ZNF548-207ENST00000597400 EIF3AQ14152 1382 aaKnown RBP16.27■□□□□ 0.2
ZNF548-207ENST00000597400 WASLO00401 505 aaPredicted RBP16.27■□□□□ 0.2
ZNF548-207ENST00000597400 APBA3O96018 575 aa16.27■□□□□ 0.2
ZNF548-207ENST00000597400 FAM196AQ6ZSG2 479 aa16.27■□□□□ 0.2
ZNF548-207ENST00000597400 STRN4Q9NRL3 753 aa16.27■□□□□ 0.2
ZNF548-207ENST00000597400 LRRC37A3O60309 1634 aa16.27■□□□□ 0.19
ZNF548-207ENST00000597400 PAK3O75914 559 aaPredicted RBP16.26■□□□□ 0.19
ZNF548-207ENST00000597400 YY1P25490 414 aa16.26■□□□□ 0.19
ZNF548-207ENST00000597400 NGDNQ8NEJ9 315 aaKnown RBP16.25■□□□□ 0.19
ZNF548-207ENST00000597400 USP35Q9P2H5 1018 aa16.25■□□□□ 0.19
ZNF548-207ENST00000597400 MYOM1P52179 1685 aa16.24■□□□□ 0.19
ZNF548-207ENST00000597400 ZC3H6P61129 1189 aaKnown RBP16.24■□□□□ 0.19
ZNF548-207ENST00000597400 NUTM2GQ5VZR2 741 aa16.23■□□□□ 0.19
ZNF548-207ENST00000597400 BARGINQ6ZT62 677 aa16.22■□□□□ 0.19
ZNF548-207ENST00000597400 AKAP12Q02952 1782 aa16.21■□□□□ 0.19
ZNF548-207ENST00000597400 LARP1Q6PKG0 1096 aaKnown RBP16.21■□□□□ 0.19
ZNF548-207ENST00000597400 POLR3AO14802 1390 aaPredicted RBP16.21■□□□□ 0.19
ZNF548-207ENST00000597400 COL5A2P05997 1499 aaPredicted RBP16.2■□□□□ 0.18
ZNF548-207ENST00000597400 NUDT16Q96DE0 195 aaKnown RBP16.19■□□□□ 0.18
ZNF548-207ENST00000597400 COL18A1P39060 1754 aa16.18■□□□□ 0.18
ZNF548-207ENST00000597400 NINLQ9Y2I6 1382 aa16.18■□□□□ 0.18
ZNF548-207ENST00000597400 RGPD5Q99666 1765 aa16.18■□□□□ 0.18
ZNF548-207ENST00000597400 USP19O94966 1318 aa16.18■□□□□ 0.18
ZNF548-207ENST00000597400 CPDO75976 1380 aa16.17■□□□□ 0.18
ZNF548-207ENST00000597400 PDE3BQ13370 1112 aa16.17■□□□□ 0.18
ZNF548-207ENST00000597400 ANO8Q9HCE9 1232 aaPredicted RBP16.17■□□□□ 0.18
ZNF548-207ENST00000597400 KCNQ2O43526 872 aa16.16■□□□□ 0.18
ZNF548-207ENST00000597400 TCP11L2Q8N4U5 519 aa16.16■□□□□ 0.18
ZNF548-207ENST00000597400 SPON1Q9HCB6 807 aa16.16■□□□□ 0.18
ZNF548-207ENST00000597400 ACEP12821 1306 aa16.16■□□□□ 0.18
ZNF548-207ENST00000597400 OVOS2A0A0G2JMS6 1433 aa16.15■□□□□ 0.18
ZNF548-207ENST00000597400 OVOS2A0A0J9YW53 1432 aa16.15■□□□□ 0.18
ZNF548-207ENST00000597400 NBPF8Q3BBV2 869 aa16.15■□□□□ 0.18
ZNF548-207ENST00000597400 NBPF14Q5TI25 921 aa16.15■□□□□ 0.18
ZNF548-207ENST00000597400 OVOS2Q6IE36 1432 aa16.15■□□□□ 0.18
ZNF548-207ENST00000597400 PDGFDQ9GZP0 370 aaPredicted RBP16.15■□□□□ 0.18
ZNF548-207ENST00000597400 PPP1R1BQ9UD71 204 aaPredicted RBP16.15■□□□□ 0.18
ZNF548-207ENST00000597400 KIAA1210Q9ULL0 1709 aa16.15■□□□□ 0.18
ZNF548-207ENST00000597400 KDM2AQ9Y2K7 1162 aa16.15■□□□□ 0.18
ZNF548-207ENST00000597400 CHD4Q14839 1912 aa16.15■□□□□ 0.18
ZNF548-207ENST00000597400 PIK3C2AO00443 1686 aa16.14■□□□□ 0.18
ZNF548-207ENST00000597400 EVA1CP58658 441 aa16.14■□□□□ 0.17
ZNF548-207ENST00000597400 PTF1AQ7RTS3 328 aa16.14■□□□□ 0.17
ZNF548-207ENST00000597400 DCAF11Q8TEB1 546 aa16.14■□□□□ 0.17
ZNF548-207ENST00000597400 GOLGB1Q14789 3259 aaKnown RBP16.14■□□□□ 0.17
ZNF548-207ENST00000597400 RAB3GAP2Q9H2M9 1393 aa16.13■□□□□ 0.17
ZNF548-207ENST00000597400 SLIT3O75094 1523 aa16.13■□□□□ 0.17
ZNF548-207ENST00000597400 CRB1P82279 1406 aa16.12■□□□□ 0.17
ZNF548-207ENST00000597400 CDK19Q9BWU1 502 aa16.12■□□□□ 0.17
ZNF548-207ENST00000597400 QRICH2Q9H0J4 1663 aa16.11■□□□□ 0.17
ZNF548-207ENST00000597400 ABTB2Q8N961 1025 aa16.1■□□□□ 0.17
ZNF548-207ENST00000597400 THRAP3Q9Y2W1 955 aaKnown RBP16.1■□□□□ 0.17
ZNF548-207ENST00000597400 PLEKHG3A1L390 1219 aa16.09■□□□□ 0.17
ZNF548-207ENST00000597400 GCP02774 474 aa16.08■□□□□ 0.16
ZNF548-207ENST00000597400 PROM2Q8N271 834 aa16.08■□□□□ 0.16
ZNF548-207ENST00000597400 CCDC61Q9Y6R9 512 aa16.08■□□□□ 0.16
ZNF548-207ENST00000597400 PPIP5K1Q6PFW1 1433 aa16.08■□□□□ 0.16
ZNF548-207ENST00000597400 PAPPAQ13219 1627 aa16.08■□□□□ 0.16
ZNF548-207ENST00000597400 PLSCR1O15162 318 aa16.07■□□□□ 0.16
ZNF548-207ENST00000597400 PTGER2P43116 358 aa16.07■□□□□ 0.16
ZNF548-207ENST00000597400 NHSQ6T4R5 1651 aa16.07■□□□□ 0.16
ZNF548-207ENST00000597400 ZBTB7AO95365 584 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms