RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 CASZ1Q86V15 1759 aa19.89■□□□□ 0.77
IRF3-218ENST00000597369 PLEKHH1Q9ULM0 1364 aa19.89■□□□□ 0.77
IRF3-218ENST00000597369 IFT172Q9UG01 1749 aa19.88■□□□□ 0.77
IRF3-218ENST00000597369 NRKQ7Z2Y5 1582 aa19.88■□□□□ 0.77
IRF3-218ENST00000597369 STK26Q9P289 416 aa19.88■□□□□ 0.77
IRF3-218ENST00000597369 TRPM3Q9HCF6 1732 aaPredicted RBP19.85■□□□□ 0.77
IRF3-218ENST00000597369 ALS2Q96Q42 1657 aa19.85■□□□□ 0.77
IRF3-218ENST00000597369 SIRT1Q96EB6 747 aa19.85■□□□□ 0.77
IRF3-218ENST00000597369 PTGER2P43116 358 aa19.84■□□□□ 0.77
IRF3-218ENST00000597369 PDE3BQ13370 1112 aa19.84■□□□□ 0.77
IRF3-218ENST00000597369 RGPD3A6NKT7 1758 aaPredicted RBP19.84■□□□□ 0.77
IRF3-218ENST00000597369 RGPD4Q7Z3J3 1758 aa19.84■□□□□ 0.77
IRF3-218ENST00000597369 MYOM1P52179 1685 aa19.84■□□□□ 0.77
IRF3-218ENST00000597369 GIGYF1O75420 1035 aaPredicted RBP19.83■□□□□ 0.77
IRF3-218ENST00000597369 SYT17Q9BSW7 474 aa19.83■□□□□ 0.77
IRF3-218ENST00000597369 CRYBG1Q9Y4K1 1723 aa19.82■□□□□ 0.76
IRF3-218ENST00000597369 BARGINQ6ZT62 677 aa19.82■□□□□ 0.76
IRF3-218ENST00000597369 C11orf95C9JLR9 678 aaPredicted RBP19.8■□□□□ 0.76
IRF3-218ENST00000597369 PLSCR1O15162 318 aa19.8■□□□□ 0.76
IRF3-218ENST00000597369 PRDM11Q9NQV5 511 aa19.8■□□□□ 0.76
IRF3-218ENST00000597369 GOLGB1Q14789 3259 aaKnown RBP19.79■□□□□ 0.76
IRF3-218ENST00000597369 LOC105371045A0A1W2PR82 267 aa19.79■□□□□ 0.76
IRF3-218ENST00000597369 ADGRF5Q8IZF2 1346 aa19.78■□□□□ 0.76
IRF3-218ENST00000597369 TMEM132EQ6IEE7 984 aa19.78■□□□□ 0.76
IRF3-218ENST00000597369 FHDC1Q9C0D6 1143 aaPredicted RBP19.78■□□□□ 0.76
IRF3-218ENST00000597369 YTHDC2Q9H6S0 1430 aaKnown RBP19.77■□□□□ 0.76
IRF3-218ENST00000597369 PMFBP1Q8TBY8 1022 aa19.77■□□□□ 0.76
IRF3-218ENST00000597369 PDGFDQ9GZP0 370 aaPredicted RBP19.77■□□□□ 0.76
IRF3-218ENST00000597369 ZBTB7AO95365 584 aa19.76■□□□□ 0.75
IRF3-218ENST00000597369 ANO8Q9HCE9 1232 aaPredicted RBP19.76■□□□□ 0.75
IRF3-218ENST00000597369 ANKARQ7Z5J8 1434 aa19.76■□□□□ 0.75
IRF3-218ENST00000597369 GPRASP1Q5JY77 1395 aa19.74■□□□□ 0.75
IRF3-218ENST00000597369 STRN4Q9NRL3 753 aa19.74■□□□□ 0.75
IRF3-218ENST00000597369 DLC1Q96QB1 1528 aa19.73■□□□□ 0.75
IRF3-218ENST00000597369 SBF2Q86WG5 1849 aa19.73■□□□□ 0.75
IRF3-218ENST00000597369 KIAA0232Q92628 1395 aa19.72■□□□□ 0.75
IRF3-218ENST00000597369 USP35Q9P2H5 1018 aa19.72■□□□□ 0.75
IRF3-218ENST00000597369 ATF5Q9Y2D1 282 aaPredicted RBP19.72■□□□□ 0.75
IRF3-218ENST00000597369 SGIP1Q9BQI5 828 aa19.71■□□□□ 0.75
IRF3-218ENST00000597369 ACIN1Q9UKV3 1341 aaKnown RBP19.71■□□□□ 0.75
IRF3-218ENST00000597369 PARP4Q9UKK3 1724 aaKnown RBP19.71■□□□□ 0.75
IRF3-218ENST00000597369 MAP3K5Q99683 1374 aa19.7■□□□□ 0.74
IRF3-218ENST00000597369 ANKRD30BQ9BXX2 1392 aa19.7■□□□□ 0.74
IRF3-218ENST00000597369 SSH2Q76I76 1423 aa19.69■□□□□ 0.74
IRF3-218ENST00000597369 PEAK1Q9H792 1746 aa19.69■□□□□ 0.74
IRF3-218ENST00000597369 CHRNA2Q15822 529 aa19.69■□□□□ 0.74
IRF3-218ENST00000597369 TCP11L2Q8N4U5 519 aa19.69■□□□□ 0.74
IRF3-218ENST00000597369 THRAP3Q9Y2W1 955 aaKnown RBP19.69■□□□□ 0.74
IRF3-218ENST00000597369 PIK3C2GO75747 1445 aa19.68■□□□□ 0.74
IRF3-218ENST00000597369 PROM2Q8N271 834 aa19.68■□□□□ 0.74
IRF3-218ENST00000597369 MTFR1LQ9H019 292 aa19.68■□□□□ 0.74
IRF3-218ENST00000597369 EVA1CP58658 441 aa19.67■□□□□ 0.74
IRF3-218ENST00000597369 BCL11BQ9C0K0 894 aaPredicted RBP19.67■□□□□ 0.74
IRF3-218ENST00000597369 ITGAEP38570 1179 aa19.66■□□□□ 0.74
IRF3-218ENST00000597369 DHX57Q6P158 1386 aaKnown RBP19.66■□□□□ 0.74
IRF3-218ENST00000597369 OVOS2A0A0G2JMS6 1433 aa19.66■□□□□ 0.74
IRF3-218ENST00000597369 OVOS2A0A0J9YW53 1432 aa19.66■□□□□ 0.74
IRF3-218ENST00000597369 OVOS2Q6IE36 1432 aa19.66■□□□□ 0.74
IRF3-218ENST00000597369 SHANK3Q9BYB0 1731 aa19.65■□□□□ 0.74
IRF3-218ENST00000597369 PHRF1Q9P1Y6 1649 aaKnown RBP19.65■□□□□ 0.74
IRF3-218ENST00000597369 SLC15A2Q16348 729 aa19.63■□□□□ 0.73
IRF3-218ENST00000597369 GPR162Q16538 588 aa19.63■□□□□ 0.73
IRF3-218ENST00000597369 LARP1Q6PKG0 1096 aaKnown RBP19.63■□□□□ 0.73
IRF3-218ENST00000597369 PRAM1Q96QH2 718 aa19.63■□□□□ 0.73
IRF3-218ENST00000597369 ARXQ96QS3 562 aa19.63■□□□□ 0.73
IRF3-218ENST00000597369 PAK3O75914 559 aaPredicted RBP19.62■□□□□ 0.73
IRF3-218ENST00000597369 ZC3H6P61129 1189 aaKnown RBP19.62■□□□□ 0.73
IRF3-218ENST00000597369 C14orf93Q9H972 538 aaKnown RBP19.62■□□□□ 0.73
IRF3-218ENST00000597369 STK32BQ9NY57 414 aa19.62■□□□□ 0.73
IRF3-218ENST00000597369 SPATA31E1Q6ZUB1 1445 aa19.61■□□□□ 0.73
IRF3-218ENST00000597369 SAFB2Q14151 953 aaKnown RBP eCLIP19.6■□□□□ 0.73
IRF3-218ENST00000597369 RGL3Q3MIN7 710 aa19.6■□□□□ 0.73
IRF3-218ENST00000597369 EIF3AQ14152 1382 aaKnown RBP19.59■□□□□ 0.73
IRF3-218ENST00000597369 NGDNQ8NEJ9 315 aaKnown RBP19.59■□□□□ 0.73
IRF3-218ENST00000597369 LMO7Q8WWI1 1683 aa19.59■□□□□ 0.73
IRF3-218ENST00000597369 PRR36Q9H6K5 1346 aa19.58■□□□□ 0.73
IRF3-218ENST00000597369 HSPA6P17066 643 aa19.58■□□□□ 0.72
IRF3-218ENST00000597369 ATP7BP35670 1465 aa19.58■□□□□ 0.72
IRF3-218ENST00000597369 PTF1AQ7RTS3 328 aa19.57■□□□□ 0.72
IRF3-218ENST00000597369 BCL9O00512 1426 aa19.57■□□□□ 0.72
IRF3-218ENST00000597369 TXNRD1Q16881 649 aa19.56■□□□□ 0.72
IRF3-218ENST00000597369 SLC4A1APQ9BWU0 796 aaKnown RBP19.56■□□□□ 0.72
IRF3-218ENST00000597369 POGKQ9P215 609 aa19.56■□□□□ 0.72
IRF3-218ENST00000597369 CPDO75976 1380 aa19.56■□□□□ 0.72
IRF3-218ENST00000597369 TULP4Q9NRJ4 1543 aa19.56■□□□□ 0.72
IRF3-218ENST00000597369 AATKQ6ZMQ8 1374 aa19.55■□□□□ 0.72
IRF3-218ENST00000597369 LRRC37A3O60309 1634 aa19.53■□□□□ 0.72
IRF3-218ENST00000597369 DDB1Q16531 1140 aa19.52■□□□□ 0.72
IRF3-218ENST00000597369 CRB1P82279 1406 aa19.51■□□□□ 0.71
IRF3-218ENST00000597369 WASLO00401 505 aaPredicted RBP19.51■□□□□ 0.71
IRF3-218ENST00000597369 CFAP70Q5T0N1 1121 aa19.51■□□□□ 0.71
IRF3-218ENST00000597369 COL5A2P05997 1499 aaPredicted RBP19.5■□□□□ 0.71
IRF3-218ENST00000597369 HIRIP3Q9BW71 556 aaPredicted RBP19.5■□□□□ 0.71
IRF3-218ENST00000597369 ITSN1Q15811 1721 aa19.49■□□□□ 0.71
IRF3-218ENST00000597369 AKAP12Q02952 1782 aa19.48■□□□□ 0.71
IRF3-218ENST00000597369 NUTM2GQ5VZR2 741 aa19.48■□□□□ 0.71
IRF3-218ENST00000597369 GRIN3BO60391 1043 aa19.47■□□□□ 0.71
IRF3-218ENST00000597369 MARCH10Q8NA82 808 aaPredicted RBP19.47■□□□□ 0.71
IRF3-218ENST00000597369 COL24A1Q17RW2 1714 aa19.47■□□□□ 0.71
IRF3-218ENST00000597369 ATP10DQ9P241 1426 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms